iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ssc-115962

UUCD1 version

UUC-SuS-00873

Ensembl Protein ID

ENSSSCP00000004132.2

UniProt Accession

F1S7Z6; F1S7Z6_PIG

Protein Name

Uncharacterized protein

Gene Name

USP1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSSCG00000003820.2	ENSSSCT00000004227.2	ENSSSCP00000004132.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	1.10e-85	288.1	83	785

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 1    tGlkNlgNtCYmNSvLQcLsnipelrellle......kkkeklneenpkepkg............ellkslqklfeel.......w... 61
           +Gl+NlgNtCY+NS+LQ+L+++p +++ +++      +kke+l++e+++++kg            el++slq+l+ ++       +   
   Q: 83   VGLNNLGNTCYLNSILQVLYFCPGFKSGVKHlfniisRKKEALKDEANQKEKGngnckedslasyELICSLQSLIISVeqlqasfLlnp 171
           6***********************************99999999999999999999999******999999999999955555551445 PP
   S: 62   ..kskkkavsprellkalkkeaeefsgyeqqDaqEflaflldqleeelkk...............eknkpkeeeeeedkselsde.... 129
             ++++ a++pr+ll++l++++++++gy q+DaqE+l+++l +++e+++                e++++kee++++d+ e++++    
   Q: 172  ekYTDELATQPRRLLNTLRELNPMYEGYLQHDAQEVLQCILGNIQETCQLlkkeevknvtelskvEEKHQKEEMSGNDSMEMDNMkhse 260
           5588888*****************************************5566667777777777767777777777777777777**** PP
   S: 130  ......................................................................................... 129
                                                                                                    
   Q: 261  dykeklpkgngkrksdtefgnmkkkvkvckehqsleenqrqtrskrkatgdtleippkinpkyisenesgrpsqkksrvkinwlkssak 349
           ***************************************************************************************** PP
   S: 130  ..................................................................aeekkkkknk.....slisdlFq 147
                                                                                   +k+      +l+++lFq
   Q: 350  qpsilskfcslgkittnqgskgqskeneydveedlgkcendnttngcglespgnnvmpinvnevkpI-----NKGAeqigfELVEKLFQ 433
           ***********************************************************99544443.....444455555******** PP
   S: 148  gqlksqikclecdnvssreepfldlslpvpgkeetkke..............slqdcLesftkeeelegenkyycekckkkqeaekklk 222
           gql  +++clec++ ++r+e+f+d+s+pv+++e +k e              +l++++++f++ e++ ge+ky+ce+c++++eae++l 
   Q: 434  GQLVLRTRCLECESLTERREDFQDISVPVQEDELSKVEesseispepktemkTLRWAISQFASVERIVGEDKYFCENCHHYTEAERSLL 522
           *********************************99998*************************************************** PP
   S: 223  lkklPevLilhLkRf.....sfseeqksrekinkkvefpleLdlspfctspeekqkekkkYeLiavvvHsG.slssGHYvayvkn.... 301
           ++k+Pev+++hLk+f     +f+++++  +kin+ + +pl+L+l+++ t+p+     +++Y L+avv+HsG ++ssGHY+a vk     
   Q: 523  FDKMPEVITIHLKCFaasglEFDCYGGGLSKINTPLLTPLKLSLEEWSTKPT-----NDSYGLFAVVMHSGiTISSGHYTASVKVtdln 606
           **************************************************99.....678***************************** PP
   S: 302  ......................................................................................... 301
                                                                                                    
   Q: 607  sleldkenfvidqmcevgkpeplneeeargvvenyddeevsirvsgstqpskvlnkknveaigllggqkskadyelynkasnpdkvast 695
           ***************************************************************************************** PP
   S: 302  ................................................ekgkWllfdDskVtevkeeevleetg......staYvlfYk 336
                                                            +gkWllfdDs+V++++e+++l++ +      st+Y+lfYk
   Q: 696  alaenrnsetntngthesdrnkessdqiginisgfenkisyivqslkeYEGKWLLFDDSEVKVTEEKDFLNSLSpstsptSTPYLLFYK 784
           ************9999999999999999999999988888888877766999*******************888**************9 PP
   S: 337  r 337
           +
   Q: 785  K 785
           7 PP

Organism

Sus scrofa

Protein Sequence
(Fasta)

MPGVIPXPSE SNGLSRGSPS KKNRLSLKFF QKKETKRALD FTDSQENEEK TSEYRGSEVD 60
QVVPAAQSSP INCEKRENLL PFVGLNNLGN TCYLNSILQV LYFCPGFKSG VKHLFNIISR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCCTGGTG TCATACCTAG NCCTAGTGAA AGTAATGGGC TTTCAAGAGG TAGTCCATCC 60
AAAAAAAACA GACTTTCCTT GAAGTTTTTT CAGAAAAAGG AAACCAAGAG AGCCTTGGAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001394--Peptidase_C19_UCH
IPR033815--USP1
IPR018200--USP_CS
IPR028889--USP_dom

PROSITE

PS00972--USP_1
PS00973--USP_2
PS50235--USP_3

Pfam

PF00443--UCH

Gene Ontology

GO:0005654--C:nucleoplasm
GO:0004197--F:cysteine-type endopeptidase activity
GO:0004843--F:thiol-dependent ubiquitin-specific protease activity
GO:0035520--P:monoubiquitinated protein deubiquitination
GO:0006282--P:regulation of DNA repair
GO:0009411--P:response to UV
GO:0001501--P:skeletal system development
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

ssc:100523071

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001939	Ailuropoda melanoleuca	93.54	0.00e+00	1407.00
IUUC-Apl-004204	Anas platyrhynchos	71.70	0.00e+00	924.00
IUUC-Aca-004637	Anolis carolinensis	65.16	0.00e+00	916.00
IUUC-Ame-011718	Astyanax mexicanus	48.71	2.00e-174	605.00
IUUC-Bta-012552	Bos taurus	93.01	0.00e+00	1414.00
IUUC-Cja-019588	Callithrix jacchus	93.92	0.00e+00	1458.00
IUUC-Cfa-020211	Canis familiaris	93.92	0.00e+00	1423.00
IUUC-Cpo-021551	Cavia porcellus	83.23	0.00e+00	1255.00
IUUC-Csa-024186	Chlorocebus sabaeus	93.92	0.00e+00	1459.00
IUUC-Cho-024739	Choloepus hoffmanni	82.66	0.00e+00	740.00
IUUC-Dre-028184	Danio rerio	49.08	4.00e-174	604.00
IUUC-Dno-029669	Dasypus novemcinctus	90.49	0.00e+00	1395.00
IUUC-Dor-030168	Dipodomys ordii	85.21	0.00e+00	1234.00
IUUC-Dme-031732	Drosophila melanogaster	28.77	2.00e-18	87.80
IUUC-Ete-032825	Echinops telfairi	86.46	0.00e+00	947.00
IUUC-Eca-033595	Equus caballus	92.60	0.00e+00	1327.00
IUUC-Eeu-034877	Erinaceus europaeus	80.78	3.00e-160	558.00
IUUC-Fca-035381	Felis catus	92.84	0.00e+00	998.00
IUUC-Fal-037592	Ficedula albicollis	68.83	0.00e+00	958.00
IUUC-Gmo-039680	Gadus morhua	45.38	3.00e-154	538.00
IUUC-Gga-041196	Gallus gallus	72.23	0.00e+00	1046.00
IUUC-Gac-042292	Gasterosteus aculeatus	48.58	1.00e-142	500.00
IUUC-Ggo-044671	Gorilla gorilla	94.04	0.00e+00	1464.00
IUUC-Hsa-047020	Homo sapiens	93.79	0.00e+00	1456.00
IUUC-Itr-048800	Ictidomys tridecemlineatus	84.07	0.00e+00	1244.00
IUUC-Lch-050543	Latimeria chalumnae	58.94	0.00e+00	710.00
IUUC-Loc-052338	Lepisosteus oculatus	51.63	0.00e+00	707.00
IUUC-Laf-053707	Loxodonta africana	90.40	0.00e+00	1406.00
IUUC-Mcc-055885	Macaca mulatta	94.04	0.00e+00	1461.00
IUUC-Meu-056573	Macropus eugenii	66.54	0.00e+00	947.00
IUUC-Mga-059346	Meleagris gallopavo	72.63	0.00e+00	1001.00
IUUC-Mmr-061612	Microcebus murinus	91.89	0.00e+00	1377.00
IUUC-Mdo-062887	Monodelphis domestica	73.02	0.00e+00	1056.00
IUUC-Mmu-064044	Mus musculus	86.71	0.00e+00	1336.00
IUUC-Mpu-066847	Mustela putorius furo	94.55	0.00e+00	1429.00
IUUC-Mlu-067684	Myotis lucifugus	91.66	0.00e+00	1412.00
IUUC-Nle-070057	Nomascus leucogenys	93.79	0.00e+00	1462.00
IUUC-Opr-070463	Ochotona princeps	87.81	0.00e+00	998.00
IUUC-Ont-071975	Oreochromis niloticus	52.79	3.00e-141	495.00
IUUC-Oan-073062	Ornithorhynchus anatinus	84.31	7.00e-47	179.00
IUUC-Ocu-074840	Oryctolagus cuniculus	91.13	0.00e+00	1404.00
IUUC-Ola-087088	Oryzias latipes	47.60	1.00e-178	619.00
IUUC-Oga-088472	Otolemur garnettii	92.02	0.00e+00	1405.00
IUUC-Oar-089498	Ovis aries	93.53	0.00e+00	1423.00
IUUC-Ptr-091395	Pan troglodytes	94.17	0.00e+00	1462.00
IUUC-Pan-092462	Papio anubis	94.17	0.00e+00	1461.00
IUUC-Psi-093583	Pelodiscus sinensis	71.51	0.00e+00	899.00
IUUC-Pma-094644	Petromyzon marinus	33.99	8.00e-28	116.00
IUUC-Pfo-096314	Poecilia formosa	46.61	9.00e-169	587.00
IUUC-Pab-098568	Pongo abelii	94.68	0.00e+00	1472.00
IUUC-Pca-100948	Procavia capensis	81.42	0.00e+00	1227.00
IUUC-Pva-102853	Pteropus vampyrus	93.27	0.00e+00	1424.00
IUUC-Rno-105573	Rattus norvegicus	86.82	0.00e+00	1316.00
IUUC-Sha-107495	Sarcophilus harrisii	72.80	0.00e+00	896.00
IUUC-Sar-113545	Sorex araneus	76.65	0.00e+00	1086.00
IUUC-Tgu-116731	Taeniopygia guttata	68.88	0.00e+00	969.00
IUUC-Tru-117893	Takifugu rubripes	46.80	3.00e-156	545.00
IUUC-Tsy-119644	Tarsius syrichta	83.35	0.00e+00	1239.00
IUUC-Tni-119819	Tetraodon nigroviridis	44.55	9.00e-172	597.00
IUUC-Tbe-127272	Tupaia belangeri	88.37	0.00e+00	1241.00
IUUC-Ttr-128404	Tursiops truncatus	94.28	0.00e+00	1457.00
IUUC-Vpa-130205	Vicugna pacos	93.39	0.00e+00	1447.00
IUUC-Xtr-132613	Xenopus tropicalis	56.63	0.00e+00	746.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence