iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPSIG00000009147.1	ENSPSIT00000010668.1	ENSPSIP00000010615.1
ENSPSIG00000009147.1	ENSPSIT00000010682.1	ENSPSIP00000010629.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.20e-30	103.4	118	156
UBD/Beta-Prp	2.60e-53	181.1	221	479

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlrtgvllk 37
           gH +sv+c+af  s++++ +GsdD+ +k+W +++g+ll 
   Q: 118  GHLSSVYCVAFdrSGRRIFTGSDDCLVKIWATDDGRLLS 156
           8**********96669******************99875 PP

UBD/Beta-Prp

   S: 23   sllatgsrdgtikvwdvttgkl........lrslsgheaevtavkfspdgkilvtgseDrtikvw..dlstgkcvhtlkghedsvlsls 101
           ++l+++++dg i  w+++  +         +++ s    ++++ +fs+ g +++tgs+D++i+++    ++++ +  l+ h+d+v++++
   Q: 221  RYLTSTGADGAICFWQWHANTIkfkdrpvkFAERSRPGVQISCSSFSSGGMFIATGSTDHVIRIYylGSESPEKIAELESHTDKVVAIQ 309
           7999*************997776677764444444444449************************88888******************* PP
   S: 102  fspsg..dklvsGshdrtirvwdletgqclee................tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkll 172
           f+ +g   ++vsGs+d t+r+w+ +++++ +                  +++++  v++v+++  +  ++++ ++  +++W++ tg+ll
   Q: 310  FCNNGdsLRFVSGSRDGTARIWQYQQQEWKSLvldmatkmtgnnllsgEDKVTKMKVTMVAWDRYDATVITAVNNFLLKVWNSTTGQLL 398
           ***8832468***************999998799**********8888888888889******************************** PP
   S: 173  rtltgghtdsvysls...fdsngkelvsgsldgtvklwdlqtgecvrtlnght.....dnvksvrfspnderlvsgssDgsiri 248
           + l+g h+d v  l+   fd+  + ++s+++dg + +wdl +g+ +r + +         v + +fsp++++++++ s+g + +
   Q: 399  HSLSG-HDDEVFVLEahpFDQ--RIMLSAGHDGNIFVWDLDKGTKIRNYFNMIegqghGAVFDCKFSPDGQHFACTDSHGHLLL 479
           ****9.*********555555..999*******************988877554555577778899999999999999887766 PP

Organism

Pelodiscus sinensis

Protein Sequence
(Fasta)

VAANAHIPPD YLLKICERIG PLLDKEIPQS VLGVQTLLGV GRQSLLRAAK DCRHTLWKGS 60
AFAALHRGRP PELPVNYGKP PNVVNIISAK QLTGYGRFSH LFPTSNYQHM KMHKRILGHL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGTGGCAGCC AATGCGCACA TCCCTCCAGA TTACCTTCTG AAAATCTGTG AGAGAATTGG 60
GCCCCTCTTA GACAAAGAGA TTCCACAGAG TGTTCTTGGA GTGCAGACTT TACTAGGTGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0103--Bromodomain
KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR001487--Bromodomain
IPR018359--Bromodomain_CS
IPR027295--Quinoprotein_ADH-like_fam
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00633--BROMODOMAIN_1
PS50014--BROMODOMAIN_2
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00439--Bromodomain
PF00400--WD40

PRINTS

PR00503--BROMODOMAIN

SMART

SM00297--BROMO
SM00320--WD40

Gene Ontology

GO:0007010--P:cytoskeleton organization
GO:0008360--P:regulation of cell shape

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001881	Ailuropoda melanoleuca	82.66	0.00e+00	2478.00
IUUC-Apl-004016	Anas platyrhynchos	86.64	0.00e+00	2428.00
IUUC-Aca-004722	Anolis carolinensis	85.25	0.00e+00	2546.00
IUUC-Ame-010602	Astyanax mexicanus	66.98	0.00e+00	1863.00
IUUC-Bta-013198	Bos taurus	81.41	0.00e+00	2344.00
IUUC-Cfa-020963	Canis familiaris	82.34	0.00e+00	2469.00
IUUC-Cpo-022448	Cavia porcellus	77.16	0.00e+00	2357.00
IUUC-Csa-023166	Chlorocebus sabaeus	82.24	0.00e+00	2447.00
IUUC-Cin-025553	Ciona intestinalis	40.73	1.00e-115	410.00
IUUC-Csv-025813	Ciona savignyi	46.14	8.00e-174	603.00
IUUC-Dre-028508	Danio rerio	67.81	0.00e+00	1825.00
IUUC-Dno-030070	Dasypus novemcinctus	79.98	0.00e+00	2369.00
IUUC-Dor-031052	Dipodomys ordii	76.71	0.00e+00	981.00
IUUC-Dme-031752	Drosophila melanogaster	49.11	4.00e-171	596.00
IUUC-Ete-032650	Echinops telfairi	81.77	0.00e+00	1607.00
IUUC-Eca-033953	Equus caballus	82.63	0.00e+00	2306.00
IUUC-Eeu-034871	Erinaceus europaeus	75.89	0.00e+00	1145.00
IUUC-Fca-036099	Felis catus	82.28	0.00e+00	2465.00
IUUC-Fal-037246	Ficedula albicollis	89.40	0.00e+00	2648.00
IUUC-Gmo-039451	Gadus morhua	53.60	9.00e-164	570.00
IUUC-Gga-041097	Gallus gallus	89.91	0.00e+00	2693.00
IUUC-Gac-042435	Gasterosteus aculeatus	65.29	0.00e+00	1775.00
IUUC-Hsa-045666	Homo sapiens	82.18	0.00e+00	2450.00
IUUC-Lch-050646	Latimeria chalumnae	62.44	0.00e+00	1776.00
IUUC-Loc-051802	Lepisosteus oculatus	71.34	0.00e+00	2065.00
IUUC-Laf-053942	Loxodonta africana	82.04	0.00e+00	2495.00
IUUC-Mcc-054645	Macaca mulatta	82.30	0.00e+00	2451.00
IUUC-Meu-056321	Macropus eugenii	74.20	0.00e+00	1057.00
IUUC-Mga-060063	Meleagris gallopavo	90.64	0.00e+00	2672.00
IUUC-Mmr-061262	Microcebus murinus	82.68	0.00e+00	2484.00
IUUC-Mdo-062320	Monodelphis domestica	74.75	0.00e+00	2164.00
IUUC-Mmu-063163	Mus musculus	81.44	0.00e+00	2438.00
IUUC-Mpu-066628	Mustela putorius furo	80.86	0.00e+00	2591.00
IUUC-Mlu-068082	Myotis lucifugus	82.00	0.00e+00	2416.00
IUUC-Nle-069609	Nomascus leucogenys	82.43	0.00e+00	2468.00
IUUC-Opr-070971	Ochotona princeps	61.41	3.00e-172	599.00
IUUC-Ont-071589	Oreochromis niloticus	63.64	0.00e+00	1768.00
IUUC-Ocu-074122	Oryctolagus cuniculus	81.96	0.00e+00	1829.00
IUUC-Ogl-077493	Oryza glaberrima	25.83	5.00e-29	124.00
IUUC-Oin-079669	Oryza indica	30.84	8.00e-50	191.00
IUUC-Oni-082991	Oryza nivara	25.50	3.00e-28	121.00
IUUC-Ola-086580	Oryzias latipes	66.00	0.00e+00	1800.00
IUUC-Oga-089053	Otolemur garnettii	81.60	0.00e+00	2456.00
IUUC-Oar-090042	Ovis aries	82.24	0.00e+00	2476.00
IUUC-Ptr-091268	Pan troglodytes	82.11	0.00e+00	2447.00
IUUC-Pan-092376	Papio anubis	82.30	0.00e+00	2451.00
IUUC-Pma-094427	Petromyzon marinus	65.80	9.00e-106	376.00
IUUC-Pfo-096515	Poecilia formosa	66.50	0.00e+00	1721.00
IUUC-Pab-097672	Pongo abelii	80.30	0.00e+00	2414.00
IUUC-Pca-101128	Procavia capensis	71.65	0.00e+00	1064.00
IUUC-Pva-102512	Pteropus vampyrus	87.60	0.00e+00	2045.00
IUUC-Rno-105797	Rattus norvegicus	81.54	0.00e+00	2422.00
IUUC-Sha-107061	Sarcophilus harrisii	75.75	0.00e+00	2393.00
IUUC-Sar-113004	Sorex araneus	68.76	0.00e+00	1343.00
IUUC-Sbi-114195	Sorghum bicolor	27.84	5.00e-49	189.00
IUUC-Ssc-115461	Sus scrofa	60.20	0.00e+00	954.00
IUUC-Tgu-117254	Taeniopygia guttata	90.49	0.00e+00	2650.00
IUUC-Tru-118186	Takifugu rubripes	66.21	0.00e+00	1754.00
IUUC-Tsy-119003	Tarsius syrichta	78.06	0.00e+00	2294.00
IUUC-Tni-120110	Tetraodon nigroviridis	65.58	0.00e+00	1728.00
IUUC-Tae-125478	Triticum aestivum	30.03	5.00e-60	226.00
IUUC-Tur-126809	Triticum urartu	29.98	1.00e-57	219.00
IUUC-Tbe-127479	Tupaia belangeri	58.47	0.00e+00	852.00
IUUC-Ttr-129265	Tursiops truncatus	82.68	0.00e+00	2387.00
IUUC-Vpa-130736	Vicugna pacos	72.62	0.00e+00	1170.00
IUUC-Xtr-132717	Xenopus tropicalis	60.86	0.00e+00	1736.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence