iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Cpo-021316

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAKN02056018

Gene Name

UBE2O

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCPOG00000012196.3	ENSCPOT00000012312.2	ENSCPOP00000010969.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E2/UBC	5.60e-30	103.9	956	1100

Active Site

Position(s)	Description	Evidence
1038	Glycyl thioester intermediate	{ECO:0000256\|PROSITE-ProRule:PRU00388}

Domain Profile

E2/UBC

   S: 2    lkkelkelekdppegisakpvdesdltewevlilGpedtpYeggvFkleiefpedYPfkPPkvkfltk...ifhPnvyenGkvClsi 85
           ++ke++ l+++ p+gi++k+ ++  ++ +++li Gp++tpYe+g++ ++i++p+ YP+ PP++++l++   +++Pn+y+nGkvC+s+
   Q: 956  VRKEMALLATSLPDGIMVKTFED-RMDLFSALIKGPTRTPYEDGLYLFDIQLPNIYPAVPPHFCYLSQcsgRLNPNLYDNGKVCVSL 1041
           589********************.5*******************************************999**************** PP
   S: 86   lk.....eeekWspalsvesvllsiqsll..aepnpesplneeaa...ellkknreeykk 135
           l+      +e+W++++s+ +vl+siq l+  +ep+++++  ++ +   e ++++r+ y++
   Q: 1042 LGtwigkGTERWTSKSSLLQVLISIQGLIlvNEPYYNEAGFDSDRglqEGYENSRC-YNE 1100
           *66666699******************9999*******998887655456666665.666 PP

Organism

Cavia porcellus

Protein Sequence
(Fasta)

FSGPPLSAPV AYGQSSTPPW PLPFSSVTTP LPSPLDPRPL PITSRSPPRE AGSQRLLFSH 60
DLVSGRYRGS VHFGLVRLIH GEDSDSEGEE EGRGSSGCSE AGGAGHEEGR ASPLRRGYVR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTCTCTGGGC CTCCTTTATC TGCTCCTGGT CAATCTTTGT TTTTTCTTTT TCTTTTTCTT 60
TTTTTTGGTC TTTTTCGTTT TTTATCGGTA CCAGGGATCA AACTCACGAC TGCCTGCTGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR000608--UBQ-conjugat_E2
IPR016135--UBQ-conjugating_enzyme/RWD

PROSITE

PS50127--UBIQUITIN_CONJUGAT_2

Pfam

PF00179--UQ_con

Gene Ontology

GO:0005829--C:cytosol
GO:0016604--C:nuclear body
GO:0003723--F:RNA binding
GO:0061631--F:ubiquitin conjugating enzyme activity
GO:0061630--F:ubiquitin protein ligase activity
GO:0030513--P:positive regulation of BMP signaling pathway
GO:0070534--P:protein K63-linked ubiquitination
GO:0006513--P:protein monoubiquitination
GO:0042147--P:retrograde transport, endosome to Golgi

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000412	Aegilops tauschii	30.59	1.00e-55	211.00
IUUC-Aml-001463	Ailuropoda melanoleuca	95.50	0.00e+00	1967.00
IUUC-Atr-002469	Amborella trichopoda	29.13	8.00e-56	212.00
IUUC-Apl-004084	Anas platyrhynchos	78.41	0.00e+00	1598.00
IUUC-Aca-004435	Anolis carolinensis	72.48	0.00e+00	1602.00
IUUC-Aly-005970	Arabidopsis lyrata	29.33	7.00e-60	226.00
IUUC-Ath-007320	Arabidopsis thaliana	29.76	1.00e-59	225.00
IUUC-Acl-008031	Aspergillus clavatus	44.23	1.00e-32	136.00
IUUC-Afl-008480	Aspergillus flavus	37.31	2.00e-35	144.00
IUUC-Afu-009040	Aspergillus fumigatus	38.46	2.00e-33	138.00
IUUC-Ani-009341	Aspergillus nidulans	41.77	2.00e-23	105.00
IUUC-Ang-009816	Aspergillus niger	39.51	7.00e-32	132.00
IUUC-Aor-010121	Aspergillus oryzae	38.25	2.00e-30	127.00
IUUC-Ate-010487	Aspergillus terreus	36.06	1.00e-34	142.00
IUUC-Ame-010604	Astyanax mexicanus	63.82	0.00e+00	1315.00
IUUC-Bta-013234	Bos taurus	95.07	0.00e+00	2056.00
IUUC-Bdi-015067	Brachypodium distachyon	38.84	8.00e-42	166.00
IUUC-Bol-016468	Brassica oleracea	42.11	2.00e-46	181.00
IUUC-Bra-016796	Brassica rapa	42.51	9.00e-47	182.00
IUUC-Cja-018812	Callithrix jacchus	96.12	0.00e+00	1999.00
IUUC-Cfa-020448	Canis familiaris	95.52	0.00e+00	1930.00
IUUC-Csa-023869	Chlorocebus sabaeus	96.04	0.00e+00	1991.00
IUUC-Cin-025614	Ciona intestinalis	36.81	2.00e-44	172.00
IUUC-Cne-026812	Cryptococcus neoformans	45.54	5.00e-45	176.00
IUUC-Dre-028814	Danio rerio	66.06	0.00e+00	880.00
IUUC-Dno-029590	Dasypus novemcinctus	94.86	0.00e+00	1444.00
IUUC-Dor-030644	Dipodomys ordii	82.95	0.00e+00	1123.00
IUUC-Dse-031508	Dothistroma septosporum	36.89	7.00e-34	139.00
IUUC-Dme-032211	Drosophila melanogaster	49.32	5.00e-65	243.00
IUUC-Eca-033413	Equus caballus	91.64	0.00e+00	1831.00
IUUC-Eeu-035035	Erinaceus europaeus	91.77	0.00e+00	1409.00
IUUC-Fca-035610	Felis catus	95.77	0.00e+00	2029.00
IUUC-Fal-036879	Ficedula albicollis	76.58	0.00e+00	1564.00
IUUC-Gmo-039262	Gadus morhua	64.43	0.00e+00	953.00
IUUC-Gga-040958	Gallus gallus	76.04	0.00e+00	1683.00
IUUC-Gac-041730	Gasterosteus aculeatus	62.81	0.00e+00	1374.00
IUUC-Gma-044191	Glycine max	29.92	2.00e-53	204.00
IUUC-Ggo-045316	Gorilla gorilla	96.20	0.00e+00	1997.00
IUUC-Hsa-046126	Homo sapiens	95.96	0.00e+00	1987.00
IUUC-Hvu-047713	Hordeum vulgare	40.45	2.00e-42	168.00
IUUC-Itr-048048	Ictidomys tridecemlineatus	96.19	0.00e+00	1976.00
IUUC-Lch-050531	Latimeria chalumnae	65.28	0.00e+00	1416.00
IUUC-Lpe-051268	Leersia perrieri	47.17	2.00e-39	157.00
IUUC-Loc-052209	Lepisosteus oculatus	66.10	0.00e+00	1434.00
IUUC-Lma-053064	Leptosphaeria maculans	42.99	8.00e-35	142.00
IUUC-Laf-053567	Loxodonta africana	95.26	2.00e-123	434.00
IUUC-Mcc-055722	Macaca mulatta	96.12	0.00e+00	1993.00
IUUC-Meu-056834	Macropus eugenii	89.89	9.00e-180	624.00
IUUC-Mtr-057804	Medicago truncatula	30.69	3.00e-59	224.00
IUUC-Mga-059571	Meleagris gallopavo	78.43	0.00e+00	1586.00
IUUC-Mvi-060389	Microbotryum violaceum	43.33	8.00e-44	172.00
IUUC-Mmr-061535	Microcebus murinus	96.28	0.00e+00	1957.00
IUUC-Mdo-062111	Monodelphis domestica	86.44	0.00e+00	1845.00
IUUC-Mmu-064171	Mus musculus	95.25	0.00e+00	2086.00
IUUC-Mac-065585	Musa acuminata	39.91	5.00e-42	166.00
IUUC-Mpu-065697	Mustela putorius furo	95.25	0.00e+00	1871.00
IUUC-Mlu-068177	Myotis lucifugus	93.34	0.00e+00	1858.00
IUUC-Nfi-068366	Neosartorya fischeri	38.68	1.00e-33	138.00
IUUC-Nle-069704	Nomascus leucogenys	95.76	0.00e+00	1912.00
IUUC-Opr-070982	Ochotona princeps	93.33	0.00e+00	1928.00
IUUC-Ont-072115	Oreochromis niloticus	62.10	0.00e+00	917.00
IUUC-Oan-072991	Ornithorhynchus anatinus	85.66	0.00e+00	790.00
IUUC-Ocu-073994	Oryctolagus cuniculus	94.44	0.00e+00	1893.00
IUUC-Oba-075236	Oryza barthii	36.21	2.00e-42	167.00
IUUC-Obr-076363	Oryza brachyantha	39.73	8.00e-43	169.00
IUUC-Ogl-077340	Oryza glaberrima	37.64	3.00e-42	167.00
IUUC-Ogu-078661	Oryza glumaepatula	43.44	2.00e-42	168.00
IUUC-Oin-080044	Oryza indica	46.15	3.00e-44	172.00
IUUC-Olo-080524	Oryza longistaminata	46.15	2.00e-44	172.00
IUUC-Ome-081767	Oryza meridionalis	36.21	1.00e-42	168.00
IUUC-Oni-082897	Oryza nivara	36.21	2.00e-42	167.00
IUUC-Opu-083143	Oryza punctata	36.21	7.00e-43	169.00
IUUC-Oru-084813	Oryza rufipogon	36.21	2.00e-42	167.00
IUUC-Osa-085536	Oryza sativa	37.64	4.00e-42	167.00
IUUC-Ola-087200	Oryzias latipes	64.07	0.00e+00	1261.00
IUUC-Oga-088737	Otolemur garnettii	95.89	0.00e+00	1990.00
IUUC-Oar-090259	Ovis aries	89.26	0.00e+00	1828.00
IUUC-Ptr-091146	Pan troglodytes	97.02	0.00e+00	1744.00
IUUC-Pan-091743	Papio anubis	96.12	0.00e+00	1993.00
IUUC-Psi-093231	Pelodiscus sinensis	78.38	0.00e+00	1634.00
IUUC-Pma-094499	Petromyzon marinus	54.92	8.00e-147	514.00
IUUC-Pno-095065	Phaeosphaeria nodorum	45.71	8.00e-31	129.00
IUUC-Ppa-095324	Physcomitrella patens	44.03	5.00e-54	206.00
IUUC-Pfo-096799	Poecilia formosa	63.91	0.00e+00	904.00
IUUC-Pab-098220	Pongo abelii	95.88	0.00e+00	1985.00
IUUC-Pop-099156	Populus trichocarpa	43.52	1.00e-42	168.00
IUUC-Pca-100963	Procavia capensis	89.65	0.00e+00	1811.00
IUUC-Ppe-101372	Prunus persica	29.42	9.00e-58	219.00
IUUC-Pva-102384	Pteropus vampyrus	94.75	0.00e+00	1973.00
IUUC-Pte-104381	Pyrenophora teres	42.93	1.00e-36	148.00
IUUC-Pyt-104607	Pyrenophora triticirepentis	39.19	2.00e-36	148.00
IUUC-Rno-105947	Rattus norvegicus	95.00	0.00e+00	1966.00
IUUC-Sha-106642	Sarcophilus harrisii	86.83	0.00e+00	1759.00
IUUC-Smo-108758	Selaginella moellendorffii	40.43	3.00e-53	203.00
IUUC-Sit-110041	Setaria italica	40.18	3.00e-43	170.00
IUUC-Sly-111922	Solanum lycopersicum	31.55	3.00e-61	230.00
IUUC-Stu-112339	Solanum tuberosum	40.38	4.00e-44	174.00
IUUC-Sbi-114493	Sorghum bicolor	28.70	5.00e-62	233.00
IUUC-Sre-114954	Sporisorium reilianum	44.34	1.00e-45	178.00
IUUC-Ssc-115901	Sus scrofa	88.73	0.00e+00	1907.00
IUUC-Tgu-116873	Taeniopygia guttata	78.47	0.00e+00	1580.00
IUUC-Tru-118710	Takifugu rubripes	55.74	0.00e+00	782.00
IUUC-Tsy-119256	Tarsius syrichta	83.65	0.00e+00	654.00
IUUC-Tni-120839	Tetraodon nigroviridis	62.08	0.00e+00	855.00
IUUC-Tca-121665	Theobroma cacao	43.78	5.00e-44	173.00
IUUC-Tae-125159	Triticum aestivum	44.30	5.00e-51	196.00
IUUC-Tme-127207	Tuber melanosporum	41.48	6.00e-35	143.00
IUUC-Ttr-128990	Tursiops truncatus	95.47	0.00e+00	2050.00
IUUC-Uma-129323	Ustilago maydis	43.48	4.00e-47	183.00
IUUC-Vvi-131411	Vitis vinifera	28.55	2.00e-59	224.00
IUUC-Xtr-132000	Xenopus tropicalis	66.05	0.00e+00	651.00
IUUC-Xma-133380	Xiphophorus maculatus	65.15	0.00e+00	1269.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence