iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ssc-115901

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CU466934

Gene Name

UBE2O

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSSCG00000029901.1	ENSSSCT00000032146.1	ENSSSCP00000019572.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E2/UBC	6.90e-30	103.9	960	1104

Active Site

Position(s)	Description	Evidence
1042	Glycyl thioester intermediate	{ECO:0000256\|PROSITE-ProRule:PRU00388}

Domain Profile

E2/UBC

   S: 2    lkkelkelekdppegisakpvdesdltewevlilGpedtpYeggvFkleiefpedYPfkPPkvkfltk...ifhPnvyenGkvClsi 85
           ++ke++ l+++ p+gi++k+ ++  ++ +++li Gp++tpYe+g++ ++i++p+ YP+ PP++++l++   +++Pn+y+nGkvC+s+
   Q: 960  VRKEMALLATSLPDGIMVKTFED-RMDLFSALIKGPTRTPYEDGLYLFDIQLPNIYPAVPPHFCYLSQcsgRLNPNLYDNGKVCVSL 1045
           589********************.5*******************************************999**************** PP
   S: 86   lk.....eeekWspalsvesvllsiqsll..aepnpesplneeaa...ellkknreeykk 135
           l+      +e+W++++s+ +vl+siq l+  +ep+++++  ++ +   e ++++r+ y++
   Q: 1046 LGtwigkGTERWTSKSSLLQVLISIQGLIlvNEPYYNEAGFDSDRglqEGYENSRC-YNE 1104
           *66666699******************9999*******998887655456666665.666 PP

Organism

Sus scrofa

Protein Sequence
(Fasta)

SASPSAQRPA GPPSCPGGLP GPSLVPSPRP TPVPALLPQQ VQESSPGARC GTEVSKHREL 60
YSIFLVCGPA RTVFYSGLLL QLWGDSSHAV AEKRGRGSES LRGAGSACPE QGRHASLRRG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TCGGCATCGC CCTCTGCTCA GAGGCCTGCG GGACCTCCCT CTTGCCCGGG AGGACTCCCG 60
GGTCCTTCCC TGGTGCCGTC CCCAAGGCCC ACACAACCTG GCCCCGCCTC CTGCTCCCCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome

Interpro

IPR000608--UBQ-conjugat_E2
IPR016135--UBQ-conjugating_enzyme/RWD

PROSITE

PS50127--UBIQUITIN_CONJUGAT_2

Pfam

PF00179--UQ_con

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005829--C:cytosol
GO:0016604--C:nuclear body
GO:0003723--F:RNA binding
GO:0061631--F:ubiquitin conjugating enzyme activity
GO:0061630--F:ubiquitin protein ligase activity
GO:0031625--F:ubiquitin protein ligase binding
GO:0030513--P:positive regulation of BMP signaling pathway
GO:0070534--P:protein K63-linked ubiquitination
GO:0006513--P:protein monoubiquitination
GO:0042147--P:retrograde transport, endosome to Golgi

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000412	Aegilops tauschii	30.32	1.00e-55	211.00
IUUC-Aml-001463	Ailuropoda melanoleuca	95.67	0.00e+00	1974.00
IUUC-Atr-002469	Amborella trichopoda	29.02	4.00e-56	213.00
IUUC-Apl-004084	Anas platyrhynchos	78.17	0.00e+00	1598.00
IUUC-Aca-004435	Anolis carolinensis	72.74	0.00e+00	1522.00
IUUC-Aly-005970	Arabidopsis lyrata	41.70	2.00e-46	181.00
IUUC-Ath-007320	Arabidopsis thaliana	41.70	1.00e-46	181.00
IUUC-Acl-008031	Aspergillus clavatus	38.59	5.00e-33	136.00
IUUC-Afl-008480	Aspergillus flavus	37.31	2.00e-35	144.00
IUUC-Afu-009040	Aspergillus fumigatus	38.46	9.00e-34	139.00
IUUC-Ani-009341	Aspergillus nidulans	41.77	1.00e-23	105.00
IUUC-Ang-009816	Aspergillus niger	39.51	4.00e-32	133.00
IUUC-Aor-010121	Aspergillus oryzae	38.95	1.00e-30	128.00
IUUC-Ate-010487	Aspergillus terreus	36.06	7.00e-35	142.00
IUUC-Ame-010604	Astyanax mexicanus	67.55	0.00e+00	880.00
IUUC-Bta-013234	Bos taurus	93.29	0.00e+00	1985.00
IUUC-Bdi-015067	Brachypodium distachyon	38.84	5.00e-42	166.00
IUUC-Bol-016468	Brassica oleracea	42.51	2.00e-46	181.00
IUUC-Bra-016796	Brassica rapa	42.51	7.00e-47	183.00
IUUC-Cja-018812	Callithrix jacchus	92.53	0.00e+00	1889.00
IUUC-Cfa-020448	Canis familiaris	95.96	0.00e+00	1938.00
IUUC-Cpo-021316	Cavia porcellus	89.69	0.00e+00	1934.00
IUUC-Csa-023869	Chlorocebus sabaeus	92.28	0.00e+00	1877.00
IUUC-Cin-025614	Ciona intestinalis	34.96	1.00e-36	146.00
IUUC-Cne-026812	Cryptococcus neoformans	45.70	2.00e-45	177.00
IUUC-Dre-028814	Danio rerio	65.62	0.00e+00	877.00
IUUC-Dno-029590	Dasypus novemcinctus	94.18	0.00e+00	1440.00
IUUC-Dor-030644	Dipodomys ordii	82.95	0.00e+00	1135.00
IUUC-Dse-031508	Dothistroma septosporum	36.89	5.00e-34	139.00
IUUC-Dme-032211	Drosophila melanogaster	49.32	1.00e-65	244.00
IUUC-Eca-033413	Equus caballus	91.64	0.00e+00	1824.00
IUUC-Eeu-035035	Erinaceus europaeus	90.89	0.00e+00	1393.00
IUUC-Fca-035610	Felis catus	94.57	0.00e+00	1969.00
IUUC-Fal-036879	Ficedula albicollis	76.79	0.00e+00	1568.00
IUUC-Gmo-039262	Gadus morhua	64.86	0.00e+00	962.00
IUUC-Gga-040958	Gallus gallus	76.29	0.00e+00	1603.00
IUUC-Gac-041730	Gasterosteus aculeatus	66.51	0.00e+00	961.00
IUUC-Gma-042690	Glycine max	42.37	2.00e-43	171.00
IUUC-Ggo-045316	Gorilla gorilla	92.36	0.00e+00	1876.00
IUUC-Hsa-046126	Homo sapiens	92.28	0.00e+00	1874.00
IUUC-Hvu-047713	Hordeum vulgare	40.45	1.00e-42	168.00
IUUC-Itr-048048	Ictidomys tridecemlineatus	94.55	0.00e+00	1922.00
IUUC-Lch-050531	Latimeria chalumnae	65.59	0.00e+00	1325.00
IUUC-Lpe-051268	Leersia perrieri	46.08	1.00e-39	158.00
IUUC-Loc-052209	Lepisosteus oculatus	69.86	0.00e+00	949.00
IUUC-Lma-053064	Leptosphaeria maculans	42.99	9.00e-35	142.00
IUUC-Laf-053567	Loxodonta africana	97.45	1.00e-125	441.00
IUUC-Mcc-055722	Macaca mulatta	92.36	0.00e+00	1880.00
IUUC-Meu-056834	Macropus eugenii	89.89	0.00e+00	629.00
IUUC-Mtr-057804	Medicago truncatula	30.09	3.00e-59	223.00
IUUC-Mga-059571	Meleagris gallopavo	78.67	0.00e+00	1598.00
IUUC-Mvi-060389	Microbotryum violaceum	43.33	5.00e-44	172.00
IUUC-Mmr-061535	Microcebus murinus	92.53	0.00e+00	1836.00
IUUC-Mdo-062111	Monodelphis domestica	85.21	0.00e+00	1761.00
IUUC-Mmu-064171	Mus musculus	88.67	0.00e+00	1917.00
IUUC-Mac-065585	Musa acuminata	39.91	3.00e-42	166.00
IUUC-Mpu-065697	Mustela putorius furo	95.52	0.00e+00	1873.00
IUUC-Mlu-068177	Myotis lucifugus	93.61	0.00e+00	1847.00
IUUC-Nfi-068366	Neosartorya fischeri	38.68	6.00e-34	139.00
IUUC-Nle-069704	Nomascus leucogenys	94.03	0.00e+00	1901.00
IUUC-Opr-070982	Ochotona princeps	91.05	0.00e+00	1860.00
IUUC-Ont-072115	Oreochromis niloticus	61.47	0.00e+00	915.00
IUUC-Oan-072991	Ornithorhynchus anatinus	86.03	0.00e+00	789.00
IUUC-Ocu-073994	Oryctolagus cuniculus	91.43	0.00e+00	1791.00
IUUC-Oba-075236	Oryza barthii	39.73	4.00e-42	166.00
IUUC-Obr-076363	Oryza brachyantha	39.73	6.00e-43	169.00
IUUC-Ogl-077340	Oryza glaberrima	39.73	4.00e-42	166.00
IUUC-Ogu-078661	Oryza glumaepatula	43.69	1.00e-42	168.00
IUUC-Oin-079331	Oryza indica	43.78	8.00e-45	174.00
IUUC-Olo-080524	Oryza longistaminata	46.15	1.00e-44	173.00
IUUC-Ome-081767	Oryza meridionalis	39.73	3.00e-42	167.00
IUUC-Oni-082897	Oryza nivara	39.73	3.00e-42	167.00
IUUC-Opu-083143	Oryza punctata	40.18	1.00e-42	168.00
IUUC-Oru-084813	Oryza rufipogon	39.73	4.00e-42	166.00
IUUC-Osa-085536	Oryza sativa	39.73	5.00e-42	166.00
IUUC-Ola-087200	Oryzias latipes	63.98	0.00e+00	1256.00
IUUC-Oga-088737	Otolemur garnettii	89.71	0.00e+00	1851.00
IUUC-Oar-090259	Ovis aries	89.77	0.00e+00	1844.00
IUUC-Ptr-091146	Pan troglodytes	92.91	0.00e+00	1625.00
IUUC-Pan-091743	Papio anubis	92.36	0.00e+00	1880.00
IUUC-Psi-093231	Pelodiscus sinensis	78.37	0.00e+00	1609.00
IUUC-Pma-094499	Petromyzon marinus	56.33	1.00e-152	534.00
IUUC-Pno-095065	Phaeosphaeria nodorum	45.71	5.00e-31	129.00
IUUC-Ppa-095324	Physcomitrella patens	46.95	6.00e-54	206.00
IUUC-Pfo-096799	Poecilia formosa	64.34	0.00e+00	915.00
IUUC-Pab-098220	Pongo abelii	92.28	0.00e+00	1876.00
IUUC-Pop-099156	Populus trichocarpa	43.52	7.00e-43	169.00
IUUC-Pca-100963	Procavia capensis	85.70	0.00e+00	1694.00
IUUC-Ppe-101372	Prunus persica	29.25	6.00e-59	222.00
IUUC-Pva-102384	Pteropus vampyrus	93.51	0.00e+00	1858.00
IUUC-Pte-104381	Pyrenophora teres	42.93	6.00e-37	149.00
IUUC-Pyt-104607	Pyrenophora triticirepentis	42.42	1.00e-36	148.00
IUUC-Rno-105947	Rattus norvegicus	92.54	0.00e+00	1895.00
IUUC-Sha-106642	Sarcophilus harrisii	86.93	0.00e+00	1767.00
IUUC-Smo-108758	Selaginella moellendorffii	39.68	3.00e-54	206.00
IUUC-Sit-110041	Setaria italica	40.18	2.00e-43	171.00
IUUC-Sly-111922	Solanum lycopersicum	44.60	3.00e-44	173.00
IUUC-Stu-112339	Solanum tuberosum	40.38	2.00e-44	174.00
IUUC-Sbi-114493	Sorghum bicolor	28.92	4.00e-62	233.00
IUUC-Sre-114954	Sporisorium reilianum	44.34	6.00e-46	179.00
IUUC-Tgu-116873	Taeniopygia guttata	78.87	0.00e+00	1587.00
IUUC-Tru-118710	Takifugu rubripes	56.86	0.00e+00	790.00
IUUC-Tsy-119256	Tarsius syrichta	83.18	0.00e+00	655.00
IUUC-Tni-120839	Tetraodon nigroviridis	62.92	0.00e+00	860.00
IUUC-Tca-121665	Theobroma cacao	29.26	6.00e-60	226.00
IUUC-Tae-125159	Triticum aestivum	40.22	1.00e-51	197.00
IUUC-Tur-126696	Triticum urartu	38.74	2.00e-42	167.00
IUUC-Tme-127207	Tuber melanosporum	42.79	5.00e-35	143.00
IUUC-Ttr-128990	Tursiops truncatus	93.38	0.00e+00	1986.00
IUUC-Uma-129323	Ustilago maydis	43.04	1.00e-46	181.00
IUUC-Vvi-131411	Vitis vinifera	28.92	1.00e-57	218.00
IUUC-Xtr-132000	Xenopus tropicalis	72.22	3.00e-151	528.00
IUUC-Xma-133380	Xiphophorus maculatus	72.92	0.00e+00	876.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence