iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

mRNA Expression
GEO
DNA & RNA Element
microRNA	RAID2
Protein-protein Interaction
IID	iRefIndex	PINA	Mentha
Post-translational Modifications (PTMs)
dbPAF	PHOSIDA
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	4.50e-14	52.7	909	1065

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 216  eaekklklkklPevLilhLkRfsfseeqksrekinkkvefple.Ldlspfcts............................................. 267
             + ++++ k P+vLi++L R+        ++k+++k+  ple +d++pf++                                              
   Q: 909  MRSAQVTFAKAPPVLIMQLPRY-------GQQKVFDKIL-PLEtIDITPFVAGavpacskcqacsevycptcfltrrvfysevifcrkcfhhthllpe 998
           46789*****************.......456999**98.5555*******99999999899999999999999988888888888888888888888 PP
   S: 268  ..............peekqkekkkYeLiavvvHsGslssGHYvayvknekgkWllfdD.............s 312
                         p++k  +++k  L+av++ +      HYvayv+ ++++W+ fd               
   Q: 999  iedhksrdlyppgkPQKK-PHSHKMVLSAVLCIET----SHYVAYVRTSSNQWVFFDSmadreglsdgfnvP 1065
           888888888877643333.349**********999....9*****************855555555554443 PP

Organism

Caenorhabditis elegans

Protein Sequence
(Fasta)

MPGEFAKFPE QSAGSHQFRN PLDELTGSNT ITNLTAHDFD YFTQSEKNSN LYTSENTSNS 60
NRLNLNQNIP VGTLIDGFEL INEASGSGFL DDQLVDVSDY SRDRTTKLDR NRNSPELIVA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AATGCCCGGC GAATTTGCAA AGTTTCCGGA GCAATCAGGT ATTTTACGAA ATAATAATAA 60
TTTTTTTTAA AACTATGTTT TTAATTTCAG CTGGATCTCA TCAATTTCGT AACCCACTCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome

Interpro

IPR000938--CAP-Gly_domain
IPR001394--Peptidase_C19_UCH
IPR028889--USP_dom

PROSITE

PS50235--USP_3

Pfam

PF01302--CAP_GLY
PF00443--UCH

SMART

SM01052--CAP_GLY

Gene Ontology

GO:0005829--C:cytosol
GO:0004843--F:thiol-dependent ubiquitin-specific protease activity
GO:0070536--P:protein K63-linked deubiquitination

KEGG

cel:CELE_F40F12.5

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001298	Ailuropoda melanoleuca	34.64	3.00e-56	212.00
IUUC-Apl-003356	Anas platyrhynchos	35.43	3.00e-58	219.00
IUUC-Aca-004402	Anolis carolinensis	34.81	2.00e-56	213.00
IUUC-Ame-011581	Astyanax mexicanus	35.86	1.00e-54	206.00
IUUC-Bta-012359	Bos taurus	34.91	2.00e-56	213.00
IUUC-Cja-018797	Callithrix jacchus	34.72	4.00e-56	211.00
IUUC-Cfa-020264	Canis familiaris	34.11	2.00e-56	213.00
IUUC-Cpo-022057	Cavia porcellus	34.64	2.00e-56	213.00
IUUC-Csa-023093	Chlorocebus sabaeus	34.97	2.00e-56	213.00
IUUC-Cho-024486	Choloepus hoffmanni	32.05	1.00e-34	140.00
IUUC-Cin-025179	Ciona intestinalis	32.73	1.00e-60	226.00
IUUC-Dre-028233	Danio rerio	30.75	3.00e-55	209.00
IUUC-Dno-029496	Dasypus novemcinctus	34.64	7.00e-57	214.00
IUUC-Dor-030919	Dipodomys ordii	35.16	1.00e-56	213.00
IUUC-Dme-032159	Drosophila melanogaster	36.29	2.00e-61	229.00
IUUC-Ete-032734	Echinops telfairi	32.55	1.00e-46	180.00
IUUC-Eca-033350	Equus caballus	34.72	3.00e-56	212.00
IUUC-Eeu-034566	Erinaceus europaeus	30.61	8.00e-19	88.20
IUUC-Fca-035632	Felis catus	42.86	8.00e-16	77.80
IUUC-Fal-037313	Ficedula albicollis	35.16	3.00e-59	222.00
IUUC-Gmo-039239	Gadus morhua	36.84	2.00e-55	209.00
IUUC-Gga-040668	Gallus gallus	35.17	1.00e-57	216.00
IUUC-Gac-042630	Gasterosteus aculeatus	34.10	1.00e-54	207.00
IUUC-Ggo-044462	Gorilla gorilla	34.72	6.00e-56	211.00
IUUC-Hsa-045846	Homo sapiens	34.72	6.00e-56	211.00
IUUC-Itr-048894	Ictidomys tridecemlineatus	42.50	5.00e-23	100.00
IUUC-Lch-049660	Latimeria chalumnae	37.63	5.00e-51	195.00
IUUC-Loc-052087	Lepisosteus oculatus	35.02	1.00e-60	226.00
IUUC-Laf-054480	Loxodonta africana	31.78	8.00e-46	177.00
IUUC-Mcc-055849	Macaca mulatta	34.97	2.00e-56	213.00
IUUC-Meu-056755	Macropus eugenii	43.40	3.00e-06	46.20
IUUC-Mga-059561	Meleagris gallopavo	34.90	3.00e-56	212.00
IUUC-Mmr-060942	Microcebus murinus	34.97	1.00e-56	213.00
IUUC-Mdo-062618	Monodelphis domestica	34.64	3.00e-56	212.00
IUUC-Mmu-063843	Mus musculus	34.88	6.00e-56	211.00
IUUC-Mpu-066919	Mustela putorius furo	34.64	3.00e-56	212.00
IUUC-Mlu-066983	Myotis lucifugus	35.16	5.00e-57	214.00
IUUC-Nle-069893	Nomascus leucogenys	34.72	6.00e-56	211.00
IUUC-Opr-071181	Ochotona princeps	32.28	1.00e-36	147.00
IUUC-Ont-071697	Oreochromis niloticus	33.95	1.00e-54	207.00
IUUC-Oan-073658	Ornithorhynchus anatinus	34.64	2.00e-56	213.00
IUUC-Ocu-074954	Oryctolagus cuniculus	34.97	1.00e-56	213.00
IUUC-Ola-086523	Oryzias latipes	36.68	2.00e-54	206.00
IUUC-Oga-089003	Otolemur garnettii	34.64	5.00e-57	215.00
IUUC-Oar-090376	Ovis aries	34.64	9.00e-57	214.00
IUUC-Ptr-090520	Pan troglodytes	34.03	3.00e-50	192.00
IUUC-Pan-092281	Papio anubis	34.97	2.00e-56	213.00
IUUC-Psi-093047	Pelodiscus sinensis	34.90	9.00e-58	217.00
IUUC-Pma-094575	Petromyzon marinus	31.25	2.00e-18	84.30
IUUC-Pfo-096358	Poecilia formosa	36.51	6.00e-54	204.00
IUUC-Pab-097740	Pongo abelii	34.72	7.00e-56	211.00
IUUC-Pca-100461	Procavia capensis	32.91	8.00e-40	157.00
IUUC-Pva-102134	Pteropus vampyrus	31.23	5.00e-46	178.00
IUUC-Rno-105807	Rattus norvegicus	34.88	5.00e-56	211.00
IUUC-Sha-107236	Sarcophilus harrisii	36.58	3.00e-55	209.00
IUUC-Sar-113366	Sorex araneus	34.38	3.00e-56	212.00
IUUC-Tgu-117201	Taeniopygia guttata	33.68	7.00e-51	194.00
IUUC-Tru-117953	Takifugu rubripes	31.20	2.00e-55	209.00
IUUC-Tsy-119610	Tarsius syrichta	33.16	9.00e-51	194.00
IUUC-Tni-120743	Tetraodon nigroviridis	31.39	4.00e-45	175.00
IUUC-Tbe-128155	Tupaia belangeri	33.17	2.00e-24	106.00
IUUC-Ttr-128942	Tursiops truncatus	33.20	2.00e-30	126.00
IUUC-Vpa-130281	Vicugna pacos	31.28	9.00e-37	147.00
IUUC-Xtr-132627	Xenopus tropicalis	33.59	5.00e-44	171.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence