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Basic Information Integrated Annotations

Tag Content
UUCD2 ID IUUC-Mmu-064088
Ensembl Protein ID ENSMUSP00000050191.5
UniProt Accession Q8R317; Q80V10; Q8C7T4; Q8C835; Q8K141; Q91VI8; Q9D0Z0; Q9QZM1; UBQL1_MOUSE
Genbank Protein ID AAF01365.1; BAC33365.1; BAC33666.1; BAB23211.1; AAH10213.1; AAH26847.1; AAH27375.1; AAH28857.1; AAH51098.1
Protein Name Ubiquilin-1; Protein linking IAP with cytoskeleton 1
Genbank Nucleotide ID AF177345; AK048534; AK049298; AK004183; BC010213; BC026847; BC027375; BC028857; BC051098
Gene Name Ubqln1; Plic1
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSMUSG00000005312.14 ENSMUST00000058735.11 ENSMUSP00000050191.5
ENSMUSG00000005312.14 ENSMUST00000076454.6 ENSMUSP00000075782.6
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEOArrayExpressGXD
DNA & RNA Element
AREsitemicroRNATRANSFACRepTar
miRNAMapRAID2
Protein-protein Interaction
IIDHINTMentha
Post-translational Modifications (PTMs)
CPLMPhosphositePlusmUbiSiDa
Protein Expression/Proteomics
GPMDB
Status Reviewed
Details
Family Domain References (PMIDs)
UBD/Alpha-Helix/UBA UBA 10549293; 24553923
ULD/UDP/UBQ/UBQ_PIM UBQ_PIM 10807547; 12826399
Classification
Family E-value Score Start End
UBD/Alpha-Helix/UBA 9.60e-10 39.4 540 577
ULD/UDP/UBQ/UBQ_PIM 7.30e-25 87.8 28 101
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   UBD/Alpha-Helix/UBA

   S: 3    dedkleqlveMGF.dreealqaLraannnleaAveyLl 39
    ++++leql +MGF +re++lqaL a++++++aA+e+Ll
   Q: 540 FQQQLEQLSAMGFlNREANLQALIATGGDINAAIERLL 577
    799**********************************9 PP
   


   ULD/UDP/UBQ/UBQ_PIM

   S: 1    mkltvktlkgkefelevseddtveelKekiakesgvppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvkksk 75
    mk+tvkt+k+ke e+ v e+++v+++Ke+i+k+++ +++q+ LI+aGkiLkD++tLs++gi+dg +vhlv+k+++
   Q: 28 MKVTVKTPKEKE-EFAVPENSSVQQFKEEISKRFKSHIDQLVLIFAGKILKDQDTLSQHGIHDGLTVHLVIKTQN 101
    99**********.***********************************************************987 PP
   

Organism Mus musculus
Functional Description
(View)

Functional Description



     Plays an important role in the regulation of different protein degradation mechanisms and pathways including ubiquitin-proteasome system (UPS), autophagy and endoplasmic reticulum-associated protein degradation (ERAD) pathway. Mediates the proteasomal targeting of misfolded or accumulated proteins for degradation by binding (via UBA domain) to their polyubiquitin chains and by interacting (via ubiquitin-like domain) with the subunits of the proteasome. Plays a role in the ERAD pathway via its interaction with ER-localized proteins UBXN4, VCP and HERPUD1 and may form a link between the polyubiquitinated ERAD substrates and the proteasome. Plays a role in unfolded protein response (UPR) by attenuating the induction of UPR-inducible genes, DDTI3/CHOP, HSPA5 and PDIA2 during ER stress. Involved in the regulation of macroautophagy and autophagosome formation; required for maturation of autophagy-related protein LC3 from the cytosolic form LC3-I to the membrane-bound form LC3-II and may assist in the maturation of autophagosomes to autolysosomes by mediating autophagosome-lysosome fusion. Negatively regulates the TICAM1/TRIF-dependent toll-like receptor signaling pathway by decreasing the abundance of TICAM1 via the autophagic pathway. Plays a key role in the regulation of the levels of PSEN1 by targeting its accumulation to aggresomes which may then be removed from cells by autophagocytosis. Promotes the ubiquitination and lysosomal degradation of ORAI1, consequently downregulating the ORAI1-mediated Ca2+ mobilization. Suppresses the maturation and proteasomal degradation of amyloid beta A4 protein (A4) by stimulating the lysine 63 (K63)-linked polyubiquitination. Delays the maturation of A4 by sequestering it in the Golgi apparatus and preventing its transport to the cell surface for subsequent processing (By similarity). Links CD47 to the cytoskeleton (PubMed:10549293).
Plays an important role in the regulation of different protein degradation mechanisms and pathways including ubiquitin-proteasome system (UPS), autophagy and endoplasmic reticulum-associated protein degradation (ERAD) pathway. Mediates the proteasomal targeting of misfolded or accumulated proteins for degradation by binding (via UBA domain) to their polyubiquitin chains and by interacting (via ubiquitin-like domain) with the subunits of the proteasome. Plays a role in the ERAD pathway via its interaction with ER-localized proteins UBXN4, VCP and HERPUD1 and may form a link between the polyubiquitinated ERAD substrates and the proteasome. Plays a role in unfolded protein response (UPR) by attenuating the induction of UPR-inducible genes, DDTI3/CHOP, HSPA5 and PDIA2 during ER stress. Involved in the regulation of macroautophagy and autophagosome formation; required for maturation of autophagy-related protein LC3 from the cytosolic form LC3-I to the membrane-bound form LC3-II and may assist in the maturation of autophagosomes to autolysosomes by mediating autophagosome-lysosome fusion. Negatively regulates the TICAM1/TRIF-dependent toll-like receptor signaling pathway by decreasing the abundance of TICAM1 via the autophagic pathway. Plays a key role in the regulation of the levels of PSEN1 by targeting its accumulation to aggresomes which may then be removed from cells by autophagocytosis. Promotes the ubiquitination and lysosomal degradation of ORAI1, consequently downregulating the ORAI1-mediated Ca2+ mobilization. Suppresses the maturation and proteasomal degradation of amyloid beta A4 protein (A4) by stimulating the lysine 63 (K63)-linked polyubiquitination. Delays the maturation of A4 by sequestering it in the Golgi apparatus and preventing its transport to the cell surface for subsequent processing (By similarity). Links CD47 to the cytoskeleton (PubMed:10549293).
Protein Sequence
(Fasta)
MAESAESGGP PGAQDSAADG GPAEPKIMKV TVKTPKEKEE FAVPENSSVQ QFKEEISKRF 60
KSHIDQLVLI FAGKILKDQD TLSQHGIHDG LTVHLVIKTQ NRPQDNSAQQ TNAPGSTVTS 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Mmu-064088|UBD,UBA;ULD,UBQ_PIM|Mus musculus
Please wait for a moment...
Nucleotide Sequence
(Fasta)
AGAGTGCCCT GCGCGGCGCC GGCGACGAGC GTGGGGGAGG TGCGGGAGGA GGAAGCGGCG 60
GCGACGCGGA GAGTCCCCGC GTCCACACGG CAGCCGATCG CCCACCCGGG GCCTGCACCC 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Mmu-064088|UBD,UBA;ULD,UBQ_PIM|Mus musculus
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0007--Acetylation
KW-0025--Alternative splicing
KW-0072--Autophagy
KW-1003--Cell membrane
KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0968--Cytoplasmic vesicle
KW-0903--Direct protein sequencing
KW-0256--Endoplasmic reticulum
KW-0472--Membrane
KW-0539--Nucleus
KW-0647--Proteasome
KW-1185--Reference proteome
KW-0832--Ubl conjugation

Interpro

IPR006636--STI1_HS-bd
IPR015940--UBA
IPR009060--UBA-like
IPR015496--Ubiquilin
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom

PROSITE

PS50030--UBA
PS50053--UBIQUITIN_2

Pfam

PF00627--UBA
PF00240--ubiquitin

SMART

SM00727--STI1
SM00165--UBA
SM00213--UBQ

Gene Ontology

GO:0016235--C:aggresome
GO:0005776--C:autophagosome
GO:0005737--C:cytoplasm
GO:0031410--C:cytoplasmic vesicle
GO:0005829--C:cytosol
GO:0005783--C:endoplasmic reticulum
GO:0005654--C:nucleoplasm
GO:0048471--C:perinuclear region of cytoplasm
GO:0005886--C:plasma membrane
GO:0000502--C:proteasome complex
GO:0043234--C:protein complex
GO:0042802--F:identical protein binding
GO:0019215--F:intermediate filament binding
GO:0019900--F:kinase binding
GO:0031593--F:polyubiquitin binding
GO:0005102--F:receptor binding
GO:0035973--P:aggrephagy
GO:0000045--P:autophagosome assembly
GO:0097352--P:autophagosome maturation
GO:0071456--P:cellular response to hypoxia
GO:0016236--P:macroautophagy
GO:1901340--P:negative regulation of store-operated calcium channel activity
GO:0034140--P:negative regulation of toll-like receptor 3 signaling pathway
GO:1903071--P:positive regulation of ER-associated ubiquitin-dependent protein catabolic process
GO:0031398--P:positive regulation of protein ubiquitination
GO:1902175--P:regulation of oxidative stress-induced intrinsic apoptotic signaling pathway
GO:0031396--P:regulation of protein ubiquitination
GO:0034976--P:response to endoplasmic reticulum stress
GO:0030433--P:ubiquitin-dependent ERAD pathway

KEGG mmu:56085
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000864 Aegilops tauschii 53.44 5.00e-37 149.00
IUUC-Aml-001461 Ailuropoda melanoleuca 83.93 0.00e+00 764.00
IUUC-Atr-002470 Amborella trichopoda 39.78 7.00e-43 168.00
IUUC-Apl-003241 Anas platyrhynchos 79.10 0.00e+00 689.00
IUUC-Aca-004511 Anolis carolinensis 78.15 0.00e+00 704.00
IUUC-Aly-005419 Arabidopsis lyrata 32.16 2.00e-52 199.00
IUUC-Ath-007350 Arabidopsis thaliana 32.38 1.00e-52 201.00
IUUC-Bta-013048 Bos taurus 84.92 0.00e+00 783.00
IUUC-Bdi-014506 Brachypodium distachyon 36.01 1.00e-51 197.00
IUUC-Bol-015452 Brassica oleracea 35.56 1.00e-51 197.00
IUUC-Bra-016907 Brassica rapa 35.00 5.00e-49 188.00
IUUC-Cel-018631 Caenorhabditis elegans 38.86 1.00e-66 247.00
IUUC-Cja-019976 Callithrix jacchus 88.73 0.00e+00 799.00
IUUC-Cfa-020092 Canis familiaris 87.63 0.00e+00 790.00
IUUC-Cpo-022388 Cavia porcellus 87.99 0.00e+00 779.00
IUUC-Csa-024087 Chlorocebus sabaeus 88.41 0.00e+00 790.00
IUUC-Cho-024834 Choloepus hoffmanni 87.82 0.00e+00 797.00
IUUC-Cin-025136 Ciona intestinalis 50.37 8.00e-110 390.00
IUUC-Csv-026009 Ciona savignyi 52.56 3.00e-99 355.00
IUUC-Cne-026833 Cryptococcus neoformans 27.95 2.00e-12 67.00
IUUC-Cme-027155 Cyanidioschyzon merolae 58.82 2.00e-34 140.00
IUUC-Dor-030519 Dipodomys ordii 86.94 0.00e+00 766.00
IUUC-Dse-031421 Dothistroma septosporum 28.88 1.00e-13 71.20
IUUC-Dme-032013 Drosophila melanogaster 45.99 4.00e-112 398.00
IUUC-Ete-032273 Echinops telfairi 86.84 0.00e+00 763.00
IUUC-Eca-033667 Equus caballus 85.96 0.00e+00 801.00
IUUC-Eeu-034865 Erinaceus europaeus 67.12 2.00e-153 535.00
IUUC-Fca-036179 Felis catus 84.79 0.00e+00 750.00
IUUC-Fal-037642 Ficedula albicollis 79.86 0.00e+00 755.00
IUUC-Gmo-039317 Gadus morhua 59.16 2.00e-157 548.00
IUUC-Gga-041264 Gallus gallus 79.12 0.00e+00 791.00
IUUC-Gma-042681 Glycine max 34.67 1.00e-44 174.00
IUUC-Ggo-044969 Gorilla gorilla 89.07 0.00e+00 781.00
IUUC-Hsa-046669 Homo sapiens 88.89 0.00e+00 803.00
IUUC-Itr-048337 Ictidomys tridecemlineatus 89.98 0.00e+00 651.00
IUUC-Lch-050192 Latimeria chalumnae 78.34 3.00e-171 595.00
IUUC-Lpe-050974 Leersia perrieri 54.68 1.00e-33 138.00
IUUC-Loc-052846 Lepisosteus oculatus 78.14 1.00e-163 570.00
IUUC-Lma-053152 Leptosphaeria maculans 29.61 8.00e-12 65.50
IUUC-Laf-054278 Loxodonta africana 88.57 0.00e+00 770.00
IUUC-Mcc-055680 Macaca mulatta 88.71 0.00e+00 803.00
IUUC-Meu-056414 Macropus eugenii 77.10 7.00e-153 534.00
IUUC-Mtr-058674 Medicago truncatula 37.63 1.00e-40 161.00
IUUC-Mga-059894 Meleagris gallopavo 83.29 7.00e-180 623.00
IUUC-Mmr-061094 Microcebus murinus 88.71 0.00e+00 785.00
IUUC-Mdo-062728 Monodelphis domestica 81.23 0.00e+00 756.00
IUUC-Mac-065458 Musa acuminata 34.71 6.00e-46 178.00
IUUC-Mpu-066282 Mustela putorius furo 86.23 0.00e+00 769.00
IUUC-Mlu-068158 Myotis lucifugus 85.30 0.00e+00 761.00
IUUC-Nle-069321 Nomascus leucogenys 88.89 0.00e+00 803.00
IUUC-Opr-071098 Ochotona princeps 80.75 4.00e-173 601.00
IUUC-Oan-072808 Ornithorhynchus anatinus 83.96 5.00e-179 620.00
IUUC-Ocu-074301 Oryctolagus cuniculus 80.47 0.00e+00 754.00
IUUC-Oba-075114 Oryza barthii 38.72 1.00e-37 151.00
IUUC-Obr-076444 Oryza brachyantha 49.70 4.00e-32 132.00
IUUC-Ogl-077319 Oryza glaberrima 33.81 5.00e-44 172.00
IUUC-Ogu-078074 Oryza glumaepatula 33.71 5.00e-47 182.00
IUUC-Oin-079142 Oryza indica 37.18 1.00e-42 167.00
IUUC-Olo-080565 Oryza longistaminata 34.76 9.00e-47 181.00
IUUC-Ome-081155 Oryza meridionalis 50.88 6.00e-34 139.00
IUUC-Oni-082272 Oryza nivara 37.18 1.00e-42 167.00
IUUC-Opu-083241 Oryza punctata 35.28 2.00e-50 193.00
IUUC-Oru-085257 Oryza rufipogon 37.18 1.00e-42 167.00
IUUC-Osa-086257 Oryza sativa 33.81 5.00e-44 172.00
IUUC-Olu-087597 Ostreococcus lucimarinus 30.94 3.00e-24 106.00
IUUC-Oga-088495 Otolemur garnettii 87.46 0.00e+00 764.00
IUUC-Oar-089711 Ovis aries 83.78 0.00e+00 760.00
IUUC-Ptr-091439 Pan troglodytes 88.53 0.00e+00 796.00
IUUC-Pan-092641 Papio anubis 88.71 0.00e+00 803.00
IUUC-Psi-093518 Pelodiscus sinensis 81.46 0.00e+00 699.00
IUUC-Pma-094727 Petromyzon marinus 40.77 1.00e-53 204.00
IUUC-Ppa-095193 Physcomitrella patens 53.60 6.00e-36 145.00
IUUC-Pab-098699 Pongo abelii 86.56 0.00e+00 798.00
IUUC-Pop-099214 Populus trichocarpa 38.38 4.00e-42 166.00
IUUC-Pca-100497 Procavia capensis 76.06 6.00e-125 441.00
IUUC-Ppe-101901 Prunus persica 35.89 9.00e-55 207.00
IUUC-Pva-102513 Pteropus vampyrus 86.42 9.00e-124 437.00
IUUC-Rno-104908 Rattus norvegicus 96.39 0.00e+00 974.00
IUUC-Sce-106332 Saccharomyces cerevisiae 31.96 3.00e-17 82.80
IUUC-Sha-106881 Sarcophilus harrisii 77.43 0.00e+00 672.00
IUUC-Spo-108223 Schizosaccharomyces pombe 27.65 2.00e-09 56.60
IUUC-Smo-108910 Selaginella moellendorffii 38.18 6.00e-40 158.00
IUUC-Sit-110766 Setaria italica 34.40 4.00e-42 166.00
IUUC-Sly-111731 Solanum lycopersicum 40.00 2.00e-41 163.00
IUUC-Stu-112263 Solanum tuberosum 39.85 1.00e-41 164.00
IUUC-Sar-113648 Sorex araneus 80.91 3.00e-168 584.00
IUUC-Sbi-114273 Sorghum bicolor 51.09 2.00e-37 150.00
IUUC-Ssc-115820 Sus scrofa 87.81 0.00e+00 790.00
IUUC-Tgu-116845 Taeniopygia guttata 75.94 0.00e+00 675.00
IUUC-Tsy-119596 Tarsius syrichta 92.61 1.00e-98 353.00
IUUC-Tca-121610 Theobroma cacao 34.32 2.00e-46 179.00
IUUC-Tae-125801 Triticum aestivum 53.44 4.00e-37 149.00
IUUC-Tur-126783 Triticum urartu 55.22 9.00e-39 154.00
IUUC-Tme-127116 Tuber melanosporum 25.00 1.00e-09 57.80
IUUC-Tbe-127379 Tupaia belangeri 76.36 0.00e+00 635.00
IUUC-Ttr-128630 Tursiops truncatus 84.03 0.00e+00 800.00
IUUC-Vpa-130413 Vicugna pacos 71.67 1.00e-130 459.00
IUUC-Vvi-131599 Vitis vinifera 40.53 6.00e-44 172.00
IUUC-Xtr-132595 Xenopus tropicalis 77.28 0.00e+00 688.00
Created Date 25-Jun-2017

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