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Basic Information Integrated Annotations

Tag Content
iUUCD ID IUUC-Rno-105448
Ensembl Protein ID ENSRNOP00000011654.3
UniProt Accession O35987; NSF1C_RAT
Genbank Protein ID CAA71742.1; BAA21659.1; AAH72464.1
Protein Name NSFL1 cofactor p47; XY body-associated protein XY40; p97 cofactor p47
Genbank Nucleotide ID Y10769; AB002086; BC072464
Gene Name Nsfl1c
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSRNOG00000008604.7 ENSRNOT00000011654.6 ENSRNOP00000011654.3
ENSRNOG00000008604.7 ENSRNOT00000090211.1 ENSRNOP00000074814.1
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEOArrayExpress
DNA & RNA Element
microRNATRANSFACmiRNAMapRAID2
Protein-protein Interaction
IIDiRefIndexPINAHINT
Mentha
Protein 3D Structure
PDBMMDB
Post-translational Modifications (PTMs)
CPLMdbPAFPhosphositePlusdbPTM
Phospho.ELMUniProt
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family E-Value Score Start End
ULD/UDP/UFD/UBX 4.00e-17 62.9 292 367
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   ULD/UDP/UFD/UBX

   S: 2    tteqatlqiRlpdGkrlvrkFpssttleqiyqfve.yllvessdpFeLvspfPrrtlkpeehmstlqeagLvpsgsll 78
    +++++++qiRl+dG rlv+kF++s+++++i+ f+ + + + F L+++fP+++l++e++ tl+ea+L++ +++
   Q: 292 AEPTTNIQIRLADGGRLVQKFNHSHRISDIRLFIVdARPAMAATSFVLMTTFPNKELADENQ--TLKEANLLNAVIVQ 367
    6889*******************************9999***********************..*********99986 PP
   

Organism Rattus norvegicus
Functional Description
(View)

Functional Description



     Reduces the ATPase activity of VCP. Necessary for the fragmentation of Golgi stacks during mitosis and for VCP-mediated reassembly of Golgi stacks after mitosis. May play a role in VCP-mediated formation of transitional endoplasmic reticulum (tER).
Reduces the ATPase activity of VCP. Necessary for the fragmentation of Golgi stacks during mitosis and for VCP-mediated reassembly of Golgi stacks after mitosis. May play a role in VCP-mediated formation of transitional endoplasmic reticulum (tER).
Protein Sequence
(Fasta)
MAEERQDALR EFVAVTGAEE DRARFFLESA GWDLQIALAS FYEDGGDEDI VTISQATPSS 60
VSRGTAPSDN RVTSFRDLIH DQDEEEEEEE GQRFYAGGSE RSGQQIVGPP RKKSPNELVD 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Rno-105448|ULD,UBX|Rattus norvegicus
Please wait for a moment...
Nucleotide Sequence
(Fasta)
GCCAGGCGCC CTGCCGCTGG ACACTGTAGA ACGGCGGGCG GAACGCAGAC CTGGGTTCGG 60
GCTGTTGCAG TGTCCGCCGG AGCGGTTTGG GGAGTGCACG GGGTGAAGAT GGCGGAGGAG 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Rno-105448|ULD,UBX|Rattus norvegicus
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0002--3D-structure
KW-0158--Chromosome
KW-0181--Complete proteome
KW-0903--Direct protein sequencing
KW-0333--Golgi apparatus
KW-0446--Lipid-binding
KW-0539--Nucleus
KW-0597--Phosphoprotein
KW-1185--Reference proteome

Interpro

IPR012989--SEP_domain
IPR009060--UBA-like
IPR029071--Ubiquitin-rel_dom
IPR001012--UBX_dom

PROSITE

PS51399--SEP
PS50033--UBX

Pfam

PF08059--SEP
PF00789--UBX

SMART

SM00553--SEP
SM00166--UBX

Gene Ontology

GO:0005694--C:chromosome
GO:0005829--C:cytosol
GO:0005795--C:Golgi stack
GO:0045111--C:intermediate filament cytoskeleton
GO:0005654--C:nucleoplasm
GO:0005634--C:nucleus
GO:0005886--C:plasma membrane
GO:1990730--C:VCP-NSFL1C complex
GO:0051117--F:ATPase binding
GO:0008289--F:lipid binding
GO:0043130--F:ubiquitin binding
GO:0007030--P:Golgi organization
GO:0061025--P:membrane fusion
GO:0031468--P:nuclear envelope reassembly
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG rno:83809
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000550 Aegilops tauschii 36.36 6.00e-35 140.00
IUUC-Aml-001919 Ailuropoda melanoleuca 95.99 0.00e+00 706.00
IUUC-Atr-002543 Amborella trichopoda 30.73 3.00e-39 155.00
IUUC-Apl-003388 Anas platyrhynchos 86.83 0.00e+00 629.00
IUUC-Aca-005210 Anolis carolinensis 86.34 0.00e+00 637.00
IUUC-Aly-006329 Arabidopsis lyrata 34.29 3.00e-35 142.00
IUUC-Ath-007064 Arabidopsis thaliana 36.33 2.00e-34 139.00
IUUC-Ago-007933 Ashbya gossypii 27.84 2.00e-18 87.00
IUUC-Ani-009398 Aspergillus nidulans 30.65 7.00e-38 150.00
IUUC-Ang-009594 Aspergillus niger 32.62 4.00e-29 122.00
IUUC-Ate-010455 Aspergillus terreus 34.49 3.00e-34 139.00
IUUC-Ame-011089 Astyanax mexicanus 72.24 2.00e-149 521.00
IUUC-Bta-012898 Bos taurus 97.57 0.00e+00 724.00
IUUC-Bdi-014746 Brachypodium distachyon 34.64 1.00e-35 143.00
IUUC-Bol-015874 Brassica oleracea 30.65 1.00e-36 146.00
IUUC-Bra-017734 Brassica rapa 34.74 6.00e-34 137.00
IUUC-Cel-018169 Caenorhabditis elegans 40.18 2.00e-38 152.00
IUUC-Cja-018993 Callithrix jacchus 96.24 0.00e+00 714.00
IUUC-Cfa-020958 Canis familiaris 97.30 0.00e+00 723.00
IUUC-Cpo-021417 Cavia porcellus 96.49 0.00e+00 715.00
IUUC-Csa-023244 Chlorocebus sabaeus 96.49 0.00e+00 718.00
IUUC-Cho-024335 Choloepus hoffmanni 74.90 1.00e-98 352.00
IUUC-Cin-025686 Ciona intestinalis 47.53 2.00e-91 329.00
IUUC-Csv-025945 Ciona savignyi 44.02 2.00e-86 312.00
IUUC-Cne-026798 Cryptococcus neoformans 37.93 1.00e-35 144.00
IUUC-Cme-027347 Cyanidioschyzon merolae 32.03 7.00e-28 117.00
IUUC-Dre-028748 Danio rerio 71.00 3.00e-146 511.00
IUUC-Dno-029977 Dasypus novemcinctus 96.77 0.00e+00 716.00
IUUC-Dor-030203 Dipodomys ordii 95.85 0.00e+00 640.00
IUUC-Dse-031256 Dothistroma septosporum 31.19 2.00e-30 126.00
IUUC-Dme-031878 Drosophila melanogaster 44.41 5.00e-60 224.00
IUUC-Ete-032997 Echinops telfairi 95.12 0.00e+00 700.00
IUUC-Eca-034132 Equus caballus 97.92 0.00e+00 658.00
IUUC-Eeu-035097 Erinaceus europaeus 71.56 1.00e-83 303.00
IUUC-Fca-036037 Felis catus 96.76 0.00e+00 653.00
IUUC-Fal-037100 Ficedula albicollis 85.88 2.00e-173 601.00
IUUC-Fso-038190 Fusarium solani 26.28 1.00e-28 120.00
IUUC-Gmo-039429 Gadus morhua 66.40 2.00e-131 461.00
IUUC-Gga-040864 Gallus gallus 87.74 0.00e+00 654.00
IUUC-Gac-041589 Gasterosteus aculeatus 70.08 7.00e-146 509.00
IUUC-Ggo-044601 Gorilla gorilla 95.97 0.00e+00 713.00
IUUC-Hsa-045773 Homo sapiens 96.49 0.00e+00 718.00
IUUC-Itr-047949 Ictidomys tridecemlineatus 96.77 0.00e+00 718.00
IUUC-Kpa-049322 Komagataella pastoris 33.45 1.00e-29 124.00
IUUC-Lch-050608 Latimeria chalumnae 74.73 2.00e-161 561.00
IUUC-Lpe-050944 Leersia perrieri 34.08 1.00e-30 128.00
IUUC-Loc-052555 Lepisosteus oculatus 74.39 1.00e-158 552.00
IUUC-Laf-054237 Loxodonta africana 96.51 0.00e+00 717.00
IUUC-Mcc-055472 Macaca mulatta 95.70 0.00e+00 712.00
IUUC-Meu-056093 Macropus eugenii 71.75 3.00e-124 437.00
IUUC-Mor-057220 Magnaporthe oryzae 25.38 7.00e-29 121.00
IUUC-Mtr-058376 Medicago truncatula 35.56 8.00e-34 137.00
IUUC-Mla-059077 Melampsora laricipopulina 33.75 6.00e-35 141.00
IUUC-Mga-059836 Meleagris gallopavo 86.76 9.00e-173 599.00
IUUC-Mvi-060292 Microbotryum violaceum 37.70 2.00e-31 130.00
IUUC-Mmr-060897 Microcebus murinus 96.77 0.00e+00 716.00
IUUC-Mdo-062066 Monodelphis domestica 89.89 0.00e+00 675.00
IUUC-Mmu-063686 Mus musculus 99.19 0.00e+00 733.00
IUUC-Mac-065403 Musa acuminata 33.92 6.00e-32 131.00
IUUC-Mpu-065688 Mustela putorius furo 97.57 0.00e+00 725.00
IUUC-Mlu-067566 Myotis lucifugus 93.24 0.00e+00 673.00
IUUC-Nle-069169 Nomascus leucogenys 96.14 0.00e+00 652.00
IUUC-Opr-070979 Ochotona princeps 93.79 2.00e-179 621.00
IUUC-Ont-071803 Oreochromis niloticus 68.11 2.00e-142 498.00
IUUC-Ocu-074276 Oryctolagus cuniculus 96.77 0.00e+00 716.00
IUUC-Ola-086761 Oryzias latipes 68.38 2.00e-136 478.00
IUUC-Olu-087598 Ostreococcus lucimarinus 32.75 2.00e-31 129.00
IUUC-Oga-088533 Otolemur garnettii 97.03 0.00e+00 719.00
IUUC-Oar-089450 Ovis aries 97.84 0.00e+00 724.00
IUUC-Ptr-090926 Pan troglodytes 96.49 0.00e+00 718.00
IUUC-Pan-092100 Papio anubis 96.22 0.00e+00 716.00
IUUC-Psi-093446 Pelodiscus sinensis 85.76 5.00e-166 576.00
IUUC-Pma-094475 Petromyzon marinus 66.31 7.00e-104 370.00
IUUC-Ppa-095833 Physcomitrella patens 33.66 6.00e-35 141.00
IUUC-Pfo-096193 Poecilia formosa 70.08 3.00e-147 514.00
IUUC-Pab-097971 Pongo abelii 96.49 0.00e+00 718.00
IUUC-Pop-098970 Populus trichocarpa 34.06 2.00e-42 166.00
IUUC-Pca-100390 Procavia capensis 96.65 1.00e-128 451.00
IUUC-Pva-102504 Pteropus vampyrus 88.17 0.00e+00 641.00
IUUC-Pgr-103447 Puccinia graminis 38.34 9.00e-33 134.00
IUUC-Ptt-103729 Puccinia triticina 33.55 3.00e-36 146.00
IUUC-Pyt-104504 Pyrenophora triticirepentis 32.19 7.00e-35 141.00
IUUC-Sce-106457 Saccharomyces cerevisiae 31.23 2.00e-29 123.00
IUUC-Spo-108358 Schizosaccharomyces pombe 29.01 1.00e-31 130.00
IUUC-Smo-109535 Selaginella moellendorffii 35.49 6.00e-33 134.00
IUUC-Sit-110328 Setaria italica 35.15 9.00e-34 137.00
IUUC-Sly-111135 Solanum lycopersicum 30.62 2.00e-39 156.00
IUUC-Stu-112733 Solanum tuberosum 33.22 1.00e-36 147.00
IUUC-Sar-113445 Sorex araneus 78.62 8.00e-129 452.00
IUUC-Sbi-114761 Sorghum bicolor 35.99 2.00e-33 135.00
IUUC-Ssc-116008 Sus scrofa 97.57 0.00e+00 723.00
IUUC-Tgu-117238 Taeniopygia guttata 86.92 0.00e+00 649.00
IUUC-Tru-118521 Takifugu rubripes 64.34 2.00e-135 475.00
IUUC-Tni-119705 Tetraodon nigroviridis 68.00 1.00e-139 489.00
IUUC-Tre-121941 Trichoderma reesei 33.83 1.00e-29 124.00
IUUC-Tvi-122602 Trichoderma virens 26.90 6.00e-27 115.00
IUUC-Tae-123686 Triticum aestivum 37.10 3.00e-37 149.00
IUUC-Tur-126267 Triticum urartu 36.82 4.00e-32 131.00
IUUC-Tme-127193 Tuber melanosporum 33.00 2.00e-38 152.00
IUUC-Tbe-127716 Tupaia belangeri 94.41 2.00e-162 564.00
IUUC-Ttr-128262 Tursiops truncatus 95.16 0.00e+00 702.00
IUUC-Uma-129600 Ustilago maydis 29.78 2.00e-39 156.00
IUUC-Vda-129743 Verticillium dahliae 29.37 1.00e-27 117.00
IUUC-Vpa-130068 Vicugna pacos 96.75 1.00e-170 591.00
IUUC-Xma-133944 Xiphophorus maculatus 69.81 2.00e-147 514.00
IUUC-Zma-135978 Zea mays 35.31 5.00e-34 138.00
Created Date 25-Jun-2017

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