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Basic Information Integrated Annotations

Tag Content
UUCD2 ID IUUC-Mmu-063469
UUCD1 version UUC-MuM-00942
Ensembl Protein ID ENSMUSP00000019229.8
UniProt Accession Q9D7W5; Q3UGB4; Q99LM4; Q9JJ84; MED8_MOUSE
Genbank Protein ID BAA95113.1; BAB25879.1; BAE27624.1; BAE28295.1; AAH02315.1; AAH21870.1
Protein Name Mediator of RNA polymerase II transcription subunit 8; Activator-recruited cofactor 32 kDa component; Mediator complex subunit 8
Genbank Nucleotide ID AB041805; AK008759; AK147032; AK148025; BC002315; BC021870
Gene Name Med8; MNCb-2386
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSMUSG00000006392.16 ENSMUST00000019229.14 ENSMUSP00000019229.8
ENSMUSG00000006392.16 ENSMUST00000106384.9 ENSMUSP00000101992.3
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEOArrayExpressGXD
DNA & RNA Element
AREsitemiRTarBasemicroRNATRANSFAC
RepTarmiRNAMapRAID2
Protein-protein Interaction
IIDiRefIndexHINTMentha
Post-translational Modifications (PTMs)
dbPAFPhosphositePlusdbPTM
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family Identity E-Value Score Source Orthology
E3 adaptor/Cullin RING/ECS/SOCS_VHL_BC-box 96.64 8.00e-128 453.00 IUUC-Hsa-046908
Active Site
Position(s) Description Evidence
N/A N/A N/A
Organism Mus musculus
Functional Description
(View)

Functional Description



     Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. May play a role as a target recruitment subunit in E3 ubiquitin-protein ligase complexes and thus in ubiquitination and subsequent proteasomal degradation of target proteins (By similarity).
Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. May play a role as a target recruitment subunit in E3 ubiquitin-protein ligase complexes and thus in ubiquitination and subsequent proteasomal degradation of target proteins (By similarity).
Protein Sequence
(Fasta)
MQREEKQLEA SLDALLNQVA DLKNSLGSFI YKLENEYDRL TWPSVLDSFA LLSGQLNTLN 60
KVLKHEKTPL FRNQVIIPLV LSPDRDEDLM RQTEGRVPVF SHEVVPDHLR TKPDPEVEEQ 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Mmu-063469|E3,SOCS|Mus musculus
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Nucleotide Sequence
(Fasta)
GAGAAACCGG AAAGGGAAGT GGTTGCGCCC GCCGGGCCGC GGCAATGCAG GTGAGAAGCG 60
GGTTGGGCCT TATAGCCGCT GGCGGGAGGG TGATTGGGCT GAGGACACCG GGGAGTTGGG 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Mmu-063469|E3,SOCS|Mus musculus
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0010--Activator
KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0539--Nucleus
KW-0597--Phosphoprotein
KW-1185--Reference proteome
KW-0804--Transcription
KW-0805--Transcription regulation
KW-0833--Ubl conjugation pathway

Interpro

IPR019364--Mediatior_Med8_fun/met

Pfam

PF10232--Med8

Gene Ontology

GO:0016592--C:mediator complex
GO:0005654--C:nucleoplasm
GO:0001104--F:RNA polymerase II transcription cofactor activity
GO:0016567--P:protein ubiquitination
GO:0006351--P:transcription, DNA-templated

KEGG mmu:80509
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aml-001562 Ailuropoda melanoleuca 96.27 1.00e-129 455.00
IUUC-Apl-004218 Anas platyrhynchos 89.10 3.00e-112 397.00
IUUC-Aca-005363 Anolis carolinensis 87.31 2.00e-124 438.00
IUUC-Ame-011384 Astyanax mexicanus 67.16 5.00e-102 363.00
IUUC-Bta-012751 Bos taurus 97.03 9.00e-130 456.00
IUUC-Cel-018292 Caenorhabditis elegans 26.73 1.00e-19 90.50
IUUC-Cja-019318 Callithrix jacchus 96.64 3.00e-128 451.00
IUUC-Cfa-020106 Canis familiaris 98.20 4.00e-61 227.00
IUUC-Cpo-022416 Cavia porcellus 96.27 1.00e-119 422.00
IUUC-Csa-023695 Chlorocebus sabaeus 96.64 9.00e-128 449.00
IUUC-Cin-025570 Ciona intestinalis 45.31 3.00e-43 168.00
IUUC-Csv-025808 Ciona savignyi 42.86 2.00e-43 169.00
IUUC-Dre-027606 Danio rerio 73.94 6.00e-70 256.00
IUUC-Dno-029924 Dasypus novemcinctus 97.01 1.00e-119 422.00
IUUC-Dor-030115 Dipodomys ordii 97.39 2.00e-129 454.00
IUUC-Dme-031887 Drosophila melanogaster 42.86 2.00e-51 195.00
IUUC-Eca-034101 Equus caballus 97.76 1.00e-131 462.00
IUUC-Eeu-034655 Erinaceus europaeus 91.42 7.00e-122 429.00
IUUC-Fca-036172 Felis catus 97.39 4.00e-130 457.00
IUUC-Fal-036877 Ficedula albicollis 88.39 9.00e-114 402.00
IUUC-Gmo-039244 Gadus morhua 63.84 1.00e-88 319.00
IUUC-Gga-040751 Gallus gallus 88.81 1.00e-112 399.00
IUUC-Gac-041885 Gasterosteus aculeatus 68.27 1.00e-95 342.00
IUUC-Ggo-045201 Gorilla gorilla 96.64 2.00e-127 448.00
IUUC-Hsa-046908 Homo sapiens 96.64 2.00e-127 448.00
IUUC-Itr-048814 Ictidomys tridecemlineatus 97.39 5.00e-131 460.00
IUUC-Lch-049994 Latimeria chalumnae 74.34 5.00e-65 240.00
IUUC-Loc-051765 Lepisosteus oculatus 71.75 1.00e-104 372.00
IUUC-Laf-053336 Loxodonta africana 95.15 2.00e-129 454.00
IUUC-Mcc-055259 Macaca mulatta 97.01 2.00e-129 454.00
IUUC-Meu-056166 Macropus eugenii 87.97 6.00e-108 383.00
IUUC-Mga-059317 Meleagris gallopavo 87.97 7.00e-111 392.00
IUUC-Mmr-061501 Microcebus murinus 97.76 4.00e-131 460.00
IUUC-Mdo-062026 Monodelphis domestica 89.96 7.00e-117 412.00
IUUC-Mpu-065945 Mustela putorius furo 97.01 2.00e-130 458.00
IUUC-Mlu-067414 Myotis lucifugus 95.52 3.00e-127 447.00
IUUC-Nle-069411 Nomascus leucogenys 96.27 8.00e-127 446.00
IUUC-Opr-070733 Ochotona princeps 95.90 7.00e-126 443.00
IUUC-Ont-071344 Oreochromis niloticus 67.90 1.00e-95 342.00
IUUC-Oan-073366 Ornithorhynchus anatinus 85.98 5.00e-104 370.00
IUUC-Ocu-074762 Oryctolagus cuniculus 97.76 2.00e-124 438.00
IUUC-Ola-086874 Oryzias latipes 66.42 8.00e-91 326.00
IUUC-Oga-088187 Otolemur garnettii 96.63 8.00e-129 452.00
IUUC-Oar-089832 Ovis aries 97.01 6.00e-130 456.00
IUUC-Ptr-091178 Pan troglodytes 96.27 8.00e-127 446.00
IUUC-Pan-092520 Papio anubis 97.01 5.00e-129 453.00
IUUC-Psi-093517 Pelodiscus sinensis 86.47 1.00e-115 409.00
IUUC-Pma-094752 Petromyzon marinus 58.97 1.00e-79 289.00
IUUC-Pfo-096659 Poecilia formosa 68.63 2.00e-92 332.00
IUUC-Pca-101064 Procavia capensis 91.04 6.00e-116 410.00
IUUC-Pva-102173 Pteropus vampyrus 96.64 3.00e-130 457.00
IUUC-Spo-108036 Schizosaccharomyces pombe 28.81 2.00e-03 35.80
IUUC-Sar-113363 Sorex araneus 94.76 3.00e-126 444.00
IUUC-Ssc-115563 Sus scrofa 97.39 2.00e-143 501.00
IUUC-Tgu-116686 Taeniopygia guttata 88.35 1.00e-113 402.00
IUUC-Tru-118003 Takifugu rubripes 65.68 2.00e-89 322.00
IUUC-Tsy-118875 Tarsius syrichta 86.94 7.00e-117 413.00
IUUC-Tni-120624 Tetraodon nigroviridis 62.13 4.00e-83 300.00
IUUC-Tca-121018 Theobroma cacao 22.22 2.40e-02 30.80
IUUC-Tbe-127611 Tupaia belangeri 96.59 5.00e-102 363.00
IUUC-Ttr-129198 Tursiops truncatus 97.39 2.00e-143 501.00
IUUC-Vpa-130245 Vicugna pacos 95.38 8.00e-48 183.00
IUUC-Xtr-132397 Xenopus tropicalis 78.73 2.00e-115 408.00
Created Date 25-Jun-2017

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