iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sja-107833

Ensembl Protein ID

EEB05889

UniProt Accession

B6JWY8; B6JWY8_SCHJY

Genbank Protein ID

EEB05889.1

Protein Name

Protein HIR

Genbank Nucleotide ID

KE651166

Gene Name

SJAG_00913

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SJAG_00913	EEB05889	EEB05889

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.10e-25	85.3	66	97

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDl 30
           +Ht+ vt+++f ++  +l+sGsdD ++ vW  
   Q: 66   THTGTVTSVRFsPNgQFLASGSDDRVVIVWHK 97
           5***********777***************75 PP

Organism

Schizosaccharomyces japonicus

Functional Description
(View)

Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle.

Protein Sequence
(Fasta)

MKLLKPSWLG HFDDRGHRLS VFSIHVHPDG SRIVTGGLDG TVRIWSTKAL YEEDKGLPKQ 60
LCCMSTHTGT VTSVRFSPNG QFLASGSDDR VVIVWHKDDS VPGLRTIFGS TETNSENWRS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTCAAATATA TATATTTGCC TTGTGAAACT GTAGTGCTGC AATAAAACAT AATGATATTA 60
GTACTACTGG TCTCAAGTTG CCATTTATTC AGTAATGACA CTCTTTTTAT TGGTCTTCAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0156--Chromatin regulator
KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0678--Repressor
KW-0804--Transcription
KW-0805--Transcription regulation
KW-0853--WD repeat

Interpro

IPR031120--HIR1
IPR011494--Hira
IPR019015--HIRA_B_motif
IPR011659--PD40
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF07569--Hira
PF09453--HIRA_B
PF07676--PD40
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0034507--C:chromosome, centromeric outer repeat region
GO:0005829--C:cytosol
GO:0000417--C:HIR complex
GO:0005634--C:nucleus
GO:1990141--P:chromatin silencing at centromere outer repeat region
GO:0030466--P:chromatin silencing at silent mating-type cassette
GO:0016569--P:covalent chromatin modification
GO:0070868--P:heterochromatin organization involved in chromatin silencing
GO:0000070--P:mitotic sister chromatid segregation
GO:0034728--P:nucleosome organization
GO:0006351--P:transcription, DNA-templated

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001039	Aegilops tauschii	26.71	7.00e-87	313.00
IUUC-Aml-001723	Ailuropoda melanoleuca	39.28	2.00e-72	265.00
IUUC-Atr-003132	Amborella trichopoda	32.82	4.00e-68	251.00
IUUC-Apl-003197	Anas platyrhynchos	35.31	5.00e-74	270.00
IUUC-Aca-004733	Anolis carolinensis	34.60	1.00e-77	282.00
IUUC-Aly-005446	Arabidopsis lyrata	28.35	7.00e-81	293.00
IUUC-Ath-007627	Arabidopsis thaliana	32.94	6.00e-70	257.00
IUUC-Ago-007766	Ashbya gossypii	33.33	2.00e-125	441.00
IUUC-Acl-008104	Aspergillus clavatus	37.73	0.00e+00	642.00
IUUC-Afl-008591	Aspergillus flavus	37.73	3.00e-178	617.00
IUUC-Afu-008781	Aspergillus fumigatus	38.25	7.00e-174	602.00
IUUC-Ani-009272	Aspergillus nidulans	36.12	3.00e-164	570.00
IUUC-Ang-009655	Aspergillus niger	37.61	3.00e-179	620.00
IUUC-Aor-010119	Aspergillus oryzae	37.73	1.00e-178	618.00
IUUC-Ate-010530	Aspergillus terreus	36.14	6.00e-167	579.00
IUUC-Bgr-012237	Blumeria graminis	37.24	6.00e-169	586.00
IUUC-Bta-013320	Bos taurus	35.17	6.00e-74	270.00
IUUC-Bci-013795	Botrytis cinerea	37.51	0.00e+00	639.00
IUUC-Bdi-014075	Brachypodium distachyon	32.94	1.00e-70	259.00
IUUC-Bol-016440	Brassica oleracea	33.40	1.00e-71	262.00
IUUC-Bra-016651	Brassica rapa	33.00	2.00e-71	262.00
IUUC-Cel-018692	Caenorhabditis elegans	30.00	2.00e-46	179.00
IUUC-Cja-018987	Callithrix jacchus	35.02	7.00e-67	246.00
IUUC-Cfa-020132	Canis familiaris	39.28	2.00e-72	265.00
IUUC-Cpo-021484	Cavia porcellus	38.13	5.00e-76	277.00
IUUC-Cre-022846	Chlamydomonas reinhardtii	31.05	2.00e-57	216.00
IUUC-Csa-023081	Chlorocebus sabaeus	34.48	4.00e-77	281.00
IUUC-Cin-025182	Ciona intestinalis	37.38	2.00e-73	268.00
IUUC-Csv-026154	Ciona savignyi	36.32	7.00e-69	253.00
IUUC-Cgl-026655	Colletotrichum gloeosporioides	37.89	2.00e-180	624.00
IUUC-Cne-026891	Cryptococcus neoformans	46.28	1.00e-100	358.00
IUUC-Cme-027349	Cyanidioschyzon merolae	25.59	3.00e-37	149.00
IUUC-Dre-027655	Danio rerio	40.69	4.00e-75	274.00
IUUC-Dno-029557	Dasypus novemcinctus	34.22	3.00e-62	231.00
IUUC-Dor-030687	Dipodomys ordii	33.16	3.00e-58	218.00
IUUC-Dse-031334	Dothistroma septosporum	37.69	2.00e-172	597.00
IUUC-Dme-031746	Drosophila melanogaster	34.84	2.00e-76	279.00
IUUC-Ete-032384	Echinops telfairi	29.24	1.00e-54	206.00
IUUC-Eca-033430	Equus caballus	34.75	2.00e-72	265.00
IUUC-Fca-036121	Felis catus	39.28	1.00e-72	266.00
IUUC-Fal-036817	Ficedula albicollis	40.73	1.00e-73	269.00
IUUC-Fox-037906	Fusarium oxysporum	44.65	1.00e-134	471.00
IUUC-Fso-038409	Fusarium solani	38.16	0.00e+00	641.00
IUUC-Gmo-039151	Gadus morhua	39.89	1.00e-78	285.00
IUUC-Ggr-040016	Gaeumannomyces graminis	36.82	1.00e-177	615.00
IUUC-Gga-040936	Gallus gallus	35.57	6.00e-78	283.00
IUUC-Gac-041405	Gasterosteus aculeatus	38.89	4.00e-73	267.00
IUUC-Gma-044252	Glycine max	32.75	2.00e-70	259.00
IUUC-Ggo-045430	Gorilla gorilla	34.48	4.00e-77	281.00
IUUC-Hsa-046442	Homo sapiens	34.48	4.00e-77	281.00
IUUC-Hvu-047587	Hordeum vulgare	27.31	2.00e-81	295.00
IUUC-Itr-048910	Ictidomys tridecemlineatus	38.59	8.00e-57	211.00
IUUC-Kpa-049145	Komagataella pastoris	32.72	2.00e-121	427.00
IUUC-Lch-050474	Latimeria chalumnae	40.16	9.00e-77	280.00
IUUC-Lpe-051209	Leersia perrieri	26.82	2.00e-86	311.00
IUUC-Loc-052119	Lepisosteus oculatus	35.56	7.00e-76	276.00
IUUC-Lma-053237	Leptosphaeria maculans	37.17	4.00e-169	586.00
IUUC-Laf-053718	Loxodonta africana	34.96	5.00e-77	280.00
IUUC-Mcc-055621	Macaca mulatta	34.62	5.00e-67	247.00
IUUC-Meu-055914	Macropus eugenii	36.51	3.00e-52	198.00
IUUC-Mor-057090	Magnaporthe oryzae	49.76	2.00e-122	431.00
IUUC-Mpo-057364	Magnaporthe poae	37.04	2.00e-180	624.00
IUUC-Mtr-057744	Medicago truncatula	27.55	5.00e-88	317.00
IUUC-Mla-058914	Melampsora laricipopulina	32.75	8.00e-115	405.00
IUUC-Mga-060181	Meleagris gallopavo	35.50	8.00e-75	273.00
IUUC-Mvi-060432	Microbotryum violaceum	40.71	3.00e-81	294.00
IUUC-Mmr-060871	Microcebus murinus	34.76	4.00e-77	281.00
IUUC-Mdo-062301	Monodelphis domestica	40.16	1.00e-75	275.00
IUUC-Mmu-063888	Mus musculus	35.16	2.00e-77	281.00
IUUC-Mac-064768	Musa acuminata	28.20	1.00e-92	332.00
IUUC-Mpu-066732	Mustela putorius furo	38.03	1.00e-72	266.00
IUUC-Mlu-067542	Myotis lucifugus	34.39	5.00e-73	267.00
IUUC-Nfi-068396	Neosartorya fischeri	38.36	2.00e-173	600.00
IUUC-Ncr-068842	Neurospora crassa	38.52	0.00e+00	631.00
IUUC-Nle-070156	Nomascus leucogenys	34.62	2.00e-77	282.00
IUUC-Opr-070808	Ochotona princeps	37.74	3.00e-47	181.00
IUUC-Ont-072105	Oreochromis niloticus	35.09	2.00e-75	275.00
IUUC-Ocu-074962	Oryctolagus cuniculus	34.60	9.00e-74	270.00
IUUC-Oba-075178	Oryza barthii	27.33	7.00e-89	320.00
IUUC-Obr-076399	Oryza brachyantha	32.28	3.00e-68	251.00
IUUC-Ogu-078797	Oryza glumaepatula	27.33	7.00e-89	320.00
IUUC-Oin-080085	Oryza indica	26.44	4.00e-78	284.00
IUUC-Olo-081048	Oryza longistaminata	34.04	1.00e-48	187.00
IUUC-Ome-081324	Oryza meridionalis	27.33	8.00e-89	320.00
IUUC-Oni-082548	Oryza nivara	27.28	1.00e-88	319.00
IUUC-Opu-084008	Oryza punctata	35.90	2.00e-67	248.00
IUUC-Oru-084339	Oryza rufipogon	27.17	2.00e-88	318.00
IUUC-Osa-085782	Oryza sativa	27.17	2.00e-88	318.00
IUUC-Ola-087302	Oryzias latipes	32.52	4.00e-67	247.00
IUUC-Olu-087611	Ostreococcus lucimarinus	38.33	4.00e-74	271.00
IUUC-Oga-087935	Otolemur garnettii	33.69	5.00e-73	267.00
IUUC-Oar-089229	Ovis aries	30.75	8.00e-54	203.00
IUUC-Ptr-090715	Pan troglodytes	34.48	3.00e-77	281.00
IUUC-Pan-092318	Papio anubis	34.24	1.00e-73	269.00
IUUC-Psi-094053	Pelodiscus sinensis	33.94	1.00e-71	262.00
IUUC-Pno-094985	Phaeosphaeria nodorum	36.49	1.00e-153	535.00
IUUC-Ppa-095499	Physcomitrella patens	33.77	3.00e-73	268.00
IUUC-Pfo-096857	Poecilia formosa	40.32	6.00e-74	270.00
IUUC-Pab-098047	Pongo abelii	34.48	4.00e-77	281.00
IUUC-Pop-099865	Populus trichocarpa	27.23	2.00e-93	335.00
IUUC-Pca-100558	Procavia capensis	40.39	8.00e-44	170.00
IUUC-Ppe-101261	Prunus persica	26.98	9.00e-90	323.00
IUUC-Pva-102683	Pteropus vampyrus	35.77	1.00e-74	272.00
IUUC-Pgr-103660	Puccinia graminis	32.53	1.00e-105	375.00
IUUC-Ptt-103900	Puccinia triticina	39.55	6.00e-96	343.00
IUUC-Pte-104209	Pyrenophora teres	37.85	1.00e-171	595.00
IUUC-Pyt-104802	Pyrenophora triticirepentis	37.78	6.00e-173	599.00
IUUC-Rno-105566	Rattus norvegicus	35.16	2.00e-77	281.00
IUUC-Sce-106291	Saccharomyces cerevisiae	32.13	1.00e-123	435.00
IUUC-Sha-107514	Sarcophilus harrisii	37.88	1.00e-60	226.00
IUUC-Spo-108162	Schizosaccharomyces pombe	56.55	0.00e+00	1001.00
IUUC-Ssl-108629	Sclerotinia sclerotiorum	29.64	3.00e-78	284.00
IUUC-Smo-109186	Selaginella moellendorffii	33.14	1.00e-71	262.00
IUUC-Sit-109980	Setaria italica	34.06	2.00e-71	262.00
IUUC-Sly-111547	Solanum lycopersicum	27.71	4.00e-95	340.00
IUUC-Stu-112705	Solanum tuberosum	27.68	8.00e-95	340.00
IUUC-Sar-113222	Sorex araneus	32.84	8.00e-64	236.00
IUUC-Sbi-114528	Sorghum bicolor	34.77	2.00e-73	268.00
IUUC-Sre-115061	Sporisorium reilianum	39.67	3.00e-101	361.00
IUUC-Ssc-116364	Sus scrofa	34.96	1.00e-72	266.00
IUUC-Tgu-116645	Taeniopygia guttata	35.43	1.00e-73	269.00
IUUC-Tru-117590	Takifugu rubripes	39.89	3.00e-74	271.00
IUUC-Tsy-119212	Tarsius syrichta	39.06	7.00e-63	233.00
IUUC-Tni-119915	Tetraodon nigroviridis	39.89	1.00e-74	272.00
IUUC-Tca-121765	Theobroma cacao	33.07	3.00e-71	261.00
IUUC-Tre-121887	Trichoderma reesei	38.01	7.00e-176	609.00
IUUC-Tvi-122262	Trichoderma virens	38.21	2.00e-174	604.00
IUUC-Tur-126483	Triticum urartu	27.67	3.00e-92	331.00
IUUC-Tme-127202	Tuber melanosporum	37.61	2.00e-174	603.00
IUUC-Tbe-127350	Tupaia belangeri	31.17	1.00e-42	166.00
IUUC-Ttr-129077	Tursiops truncatus	32.42	4.00e-66	244.00
IUUC-Uma-129465	Ustilago maydis	38.81	6.00e-100	356.00
IUUC-Vda-129844	Verticillium dahliae	38.71	3.00e-138	484.00
IUUC-Vvi-131397	Vitis vinifera	29.55	1.00e-91	329.00
IUUC-Xtr-132057	Xenopus tropicalis	39.63	8.00e-76	276.00
IUUC-Xma-134139	Xiphophorus maculatus	39.94	2.00e-64	238.00
IUUC-Yli-134424	Yarrowia lipolytica	35.59	2.00e-170	591.00
IUUC-Zma-135506	Zea mays	28.10	7.00e-94	336.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence