iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Apl-003637

Ensembl Protein ID

ENSAPLP00000002657.1

UniProt Accession

R0KCF7; R0KCF7_ANAPL

Genbank Protein ID

EOB08051.1

Protein Name

mRNA export factor

Genbank Nucleotide ID

ADON01010405

Gene Name

RAE1; Anapl_00273

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSAPLG00000003160.1	ENSAPLT00000003249.1	ENSAPLP00000002657.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.90e-19	67.1	126	163

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf...sd.tllvsGsdDgtikvWDlrtgvl 35
           H ++v  +++   ++   + +Gs+D+t+k WD+r+ ++
   Q: 126  HDAPVKTIHWikaPNySCVMTGSWDKTLKFWDTRSPTP 163
           999**********877789*************998765 PP

Organism

Anas platyrhynchos

Protein Sequence
(Fasta)

MSLFGSTSGF GTGGTSMFGS TTADNHNPMK DIEVTSPPDD SVSCLAFSPP TLPGNFLIAG 60
SWANDVRCWE VQDNGQTIPK AQQMHTGPVL DGCWSDDGSK VFTASCDKTA KMWDLNSNQA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TGGTGGGACG CGGCGTGAGG GGTGCTCTGT GGTGCTCAGG GGGACGTTTT GTCGTTTGCA 60
GAGCAAGGAT GAGTCTTTTC GGGTCAACCT CGGGGTTCGG GACTGGAGGT ACCAGCATGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0001650--C:fibrillar center
GO:0005643--C:nuclear pore
GO:0003723--F:RNA binding
GO:0071407--P:cellular response to organic cyclic compound

KEGG

apla:101793929

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000293	Aegilops tauschii	46.87	2.00e-81	295.00
IUUC-Aml-002179	Ailuropoda melanoleuca	95.65	0.00e+00	704.00
IUUC-Atr-002609	Amborella trichopoda	51.33	3.00e-95	341.00
IUUC-Aca-005042	Anolis carolinensis	96.52	0.00e+00	707.00
IUUC-Aly-006015	Arabidopsis lyrata	50.00	1.00e-96	345.00
IUUC-Ath-007659	Arabidopsis thaliana	49.44	5.00e-95	340.00
IUUC-Ago-008004	Ashbya gossypii	42.90	9.00e-77	280.00
IUUC-Acl-008030	Aspergillus clavatus	46.04	6.00e-82	297.00
IUUC-Afl-008636	Aspergillus flavus	46.04	9.00e-82	296.00
IUUC-Afu-009121	Aspergillus fumigatus	46.63	4.00e-83	301.00
IUUC-Ani-009238	Aspergillus nidulans	45.45	7.00e-81	293.00
IUUC-Ang-009801	Aspergillus niger	45.88	9.00e-80	290.00
IUUC-Aor-009974	Aspergillus oryzae	46.04	9.00e-82	296.00
IUUC-Ate-010406	Aspergillus terreus	46.04	2.00e-82	298.00
IUUC-Ame-011368	Astyanax mexicanus	92.17	0.00e+00	693.00
IUUC-Bgr-012233	Blumeria graminis	43.06	3.00e-70	258.00
IUUC-Bta-012856	Bos taurus	95.65	0.00e+00	704.00
IUUC-Bci-013964	Botrytis cinerea	44.87	1.00e-76	279.00
IUUC-Bdi-014049	Brachypodium distachyon	50.29	4.00e-92	330.00
IUUC-Bol-015367	Brassica oleracea	50.00	6.00e-94	337.00
IUUC-Bra-016903	Brassica rapa	50.00	6.00e-94	337.00
IUUC-Cel-018563	Caenorhabditis elegans	52.05	3.00e-97	348.00
IUUC-Cja-019700	Callithrix jacchus	95.65	0.00e+00	703.00
IUUC-Cfa-020337	Canis familiaris	95.94	0.00e+00	705.00
IUUC-Cpo-021858	Cavia porcellus	95.94	0.00e+00	706.00
IUUC-Cre-022748	Chlamydomonas reinhardtii	45.45	5.00e-85	307.00
IUUC-Csa-023322	Chlorocebus sabaeus	95.65	0.00e+00	704.00
IUUC-Cho-024533	Choloepus hoffmanni	69.28	7.00e-132	462.00
IUUC-Cin-025393	Ciona intestinalis	73.09	6.00e-160	556.00
IUUC-Csv-026093	Ciona savignyi	72.30	7.00e-162	562.00
IUUC-Cgl-026503	Colletotrichum gloeosporioides	38.17	5.00e-55	207.00
IUUC-Cne-026774	Cryptococcus neoformans	42.82	1.00e-69	256.00
IUUC-Cme-027243	Cyanidioschyzon merolae	37.00	5.00e-66	244.00
IUUC-Dre-028159	Danio rerio	92.75	0.00e+00	696.00
IUUC-Dno-028852	Dasypus novemcinctus	95.94	0.00e+00	705.00
IUUC-Dor-030445	Dipodomys ordii	80.00	1.00e-161	561.00
IUUC-Dse-031161	Dothistroma septosporum	42.40	3.00e-67	248.00
IUUC-Dme-032009	Drosophila melanogaster	69.34	2.00e-148	518.00
IUUC-Eca-033306	Equus caballus	95.94	0.00e+00	704.00
IUUC-Fca-035579	Felis catus	95.94	0.00e+00	705.00
IUUC-Fal-037582	Ficedula albicollis	99.13	0.00e+00	729.00
IUUC-Fox-037772	Fusarium oxysporum	42.73	2.00e-73	268.00
IUUC-Fso-038368	Fusarium solani	43.15	2.00e-74	271.00
IUUC-Gmo-038500	Gadus morhua	90.14	0.00e+00	679.00
IUUC-Ggr-040019	Gaeumannomyces graminis	43.43	7.00e-76	276.00
IUUC-Gga-040684	Gallus gallus	99.42	0.00e+00	730.00
IUUC-Gac-042592	Gasterosteus aculeatus	91.59	0.00e+00	688.00
IUUC-Gma-043683	Glycine max	51.40	1.00e-95	342.00
IUUC-Ggo-044965	Gorilla gorilla	95.65	0.00e+00	702.00
IUUC-Hsa-046779	Homo sapiens	95.27	0.00e+00	643.00
IUUC-Hvu-047380	Hordeum vulgare	48.15	2.00e-83	302.00
IUUC-Itr-048819	Ictidomys tridecemlineatus	96.23	0.00e+00	707.00
IUUC-Kpa-049284	Komagataella pastoris	43.27	2.00e-73	268.00
IUUC-Lch-050559	Latimeria chalumnae	81.62	1.00e-178	618.00
IUUC-Lpe-051050	Leersia perrieri	50.00	8.00e-91	326.00
IUUC-Loc-052874	Lepisosteus oculatus	91.59	0.00e+00	684.00
IUUC-Lma-053085	Leptosphaeria maculans	40.00	5.00e-64	237.00
IUUC-Laf-053980	Loxodonta africana	95.65	0.00e+00	704.00
IUUC-Mcc-055408	Macaca mulatta	95.65	0.00e+00	703.00
IUUC-Meu-056551	Macropus eugenii	88.46	0.00e+00	629.00
IUUC-Mor-057248	Magnaporthe oryzae	44.71	3.00e-77	281.00
IUUC-Mpo-057390	Magnaporthe poae	42.30	5.00e-75	274.00
IUUC-Mtr-057675	Medicago truncatula	50.56	1.00e-95	342.00
IUUC-Mla-059155	Melampsora laricipopulina	44.86	9.00e-84	303.00
IUUC-Mga-060140	Meleagris gallopavo	99.34	0.00e+00	641.00
IUUC-Mvi-060311	Microbotryum violaceum	45.29	2.00e-80	292.00
IUUC-Mmr-061533	Microcebus murinus	96.23	0.00e+00	707.00
IUUC-Mdo-062593	Monodelphis domestica	97.10	0.00e+00	713.00
IUUC-Mmu-063362	Mus musculus	96.23	0.00e+00	706.00
IUUC-Mac-064968	Musa acuminata	47.49	4.00e-82	297.00
IUUC-Mpu-065722	Mustela putorius furo	95.94	0.00e+00	707.00
IUUC-Mlu-068124	Myotis lucifugus	95.65	0.00e+00	704.00
IUUC-Nfi-068595	Neosartorya fischeri	46.63	2.00e-83	301.00
IUUC-Ncr-068790	Neurospora crassa	42.42	2.00e-74	272.00
IUUC-Nle-069395	Nomascus leucogenys	81.16	2.00e-163	568.00
IUUC-Opr-070320	Ochotona princeps	87.83	0.00e+00	630.00
IUUC-Ont-071303	Oreochromis niloticus	93.04	0.00e+00	696.00
IUUC-Oan-073724	Ornithorhynchus anatinus	96.81	0.00e+00	712.00
IUUC-Ocu-074961	Oryctolagus cuniculus	95.31	0.00e+00	646.00
IUUC-Oba-075879	Oryza barthii	50.45	9.00e-90	323.00
IUUC-Obr-076805	Oryza brachyantha	49.71	1.00e-90	325.00
IUUC-Ogl-077767	Oryza glaberrima	50.00	1.00e-90	326.00
IUUC-Ogu-078760	Oryza glumaepatula	49.57	1.00e-88	319.00
IUUC-Oin-080219	Oryza indica	50.00	1.00e-90	326.00
IUUC-Olo-081007	Oryza longistaminata	50.00	1.00e-90	326.00
IUUC-Ome-081848	Oryza meridionalis	47.01	3.00e-86	311.00
IUUC-Oni-082844	Oryza nivara	50.00	1.00e-90	326.00
IUUC-Opu-083511	Oryza punctata	46.72	6.00e-86	310.00
IUUC-Oru-084270	Oryza rufipogon	49.57	2.00e-89	322.00
IUUC-Osa-085287	Oryza sativa	50.00	1.00e-90	326.00
IUUC-Ola-087292	Oryzias latipes	93.04	0.00e+00	696.00
IUUC-Olu-087689	Ostreococcus lucimarinus	49.27	4.00e-93	334.00
IUUC-Oga-088821	Otolemur garnettii	95.94	0.00e+00	705.00
IUUC-Oar-090253	Ovis aries	95.94	0.00e+00	705.00
IUUC-Ptr-091097	Pan troglodytes	94.20	0.00e+00	694.00
IUUC-Pan-091835	Papio anubis	95.65	0.00e+00	703.00
IUUC-Psi-093000	Pelodiscus sinensis	97.39	0.00e+00	715.00
IUUC-Pma-094273	Petromyzon marinus	85.51	0.00e+00	657.00
IUUC-Pno-094920	Phaeosphaeria nodorum	39.27	2.00e-57	216.00
IUUC-Ppa-095202	Physcomitrella patens	53.16	2.00e-77	281.00
IUUC-Pfo-096388	Poecilia formosa	92.75	0.00e+00	694.00
IUUC-Pab-097533	Pongo abelii	95.65	0.00e+00	703.00
IUUC-Pop-099348	Populus trichocarpa	47.47	2.00e-87	315.00
IUUC-Pca-100638	Procavia capensis	73.65	2.00e-61	229.00
IUUC-Ppe-101817	Prunus persica	51.31	3.00e-95	341.00
IUUC-Pva-102233	Pteropus vampyrus	95.07	0.00e+00	698.00
IUUC-Pgr-103342	Puccinia graminis	45.77	4.00e-86	311.00
IUUC-Ptt-103836	Puccinia triticina	45.59	6.00e-87	313.00
IUUC-Pte-104387	Pyrenophora teres	41.74	5.00e-66	244.00
IUUC-Pyt-104737	Pyrenophora triticirepentis	41.69	6.00e-67	247.00
IUUC-Rno-105548	Rattus norvegicus	95.65	0.00e+00	702.00
IUUC-Sce-106379	Saccharomyces cerevisiae	42.38	1.00e-78	286.00
IUUC-Sha-107617	Sarcophilus harrisii	97.54	3.00e-146	509.00
IUUC-Sja-107668	Schizosaccharomyces japonicus	47.35	9.00e-81	293.00
IUUC-Spo-108293	Schizosaccharomyces pombe	48.97	4.00e-88	317.00
IUUC-Smo-109611	Selaginella moellendorffii	50.14	9.00e-95	339.00
IUUC-Sit-110436	Setaria italica	48.71	3.00e-90	324.00
IUUC-Sly-111037	Solanum lycopersicum	50.28	7.00e-98	350.00
IUUC-Sbi-114361	Sorghum bicolor	48.04	5.00e-91	327.00
IUUC-Sre-114922	Sporisorium reilianum	41.28	5.00e-66	244.00
IUUC-Ssc-116305	Sus scrofa	95.94	0.00e+00	705.00
IUUC-Tgu-116751	Taeniopygia guttata	99.13	0.00e+00	728.00
IUUC-Tru-117798	Takifugu rubripes	91.88	0.00e+00	687.00
IUUC-Tsy-119523	Tarsius syrichta	96.36	1.00e-162	565.00
IUUC-Tni-120477	Tetraodon nigroviridis	91.93	0.00e+00	686.00
IUUC-Tca-121802	Theobroma cacao	51.13	4.00e-96	343.00
IUUC-Tre-121994	Trichoderma reesei	43.79	1.00e-71	263.00
IUUC-Tvi-122631	Trichoderma virens	43.20	2.00e-70	258.00
IUUC-Tae-124004	Triticum aestivum	50.58	5.00e-91	327.00
IUUC-Tur-126390	Triticum urartu	50.00	2.00e-91	328.00
IUUC-Tme-127152	Tuber melanosporum	47.93	2.00e-79	288.00
IUUC-Tbe-127319	Tupaia belangeri	81.35	2.00e-119	422.00
IUUC-Ttr-129207	Tursiops truncatus	94.77	0.00e+00	691.00
IUUC-Uma-129342	Ustilago maydis	40.82	2.00e-60	226.00
IUUC-Vda-129865	Verticillium dahliae	42.73	4.00e-76	278.00
IUUC-Vpa-130076	Vicugna pacos	84.82	1.00e-155	541.00
IUUC-Vvi-131104	Vitis vinifera	50.85	7.00e-96	343.00
IUUC-Xtr-132917	Xenopus tropicalis	73.49	4.00e-146	510.00
IUUC-Xma-133615	Xiphophorus maculatus	92.75	0.00e+00	695.00
IUUC-Yli-134431	Yarrowia lipolytica	41.64	4.00e-73	268.00
IUUC-Zma-135142	Zea mays	49.15	3.00e-92	331.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence