iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
FBgn0000114	FBtr0331645	FBpp0304035
FBgn0000114	FBtr0331644	FBpp0304034
FBgn0000114	FBtr0300567	FBpp0289794

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
DNA & RNA Element
microRNA	RAID2
Protein-protein Interaction
Mentha
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/SCF/F-box	42.86	8.00e-04	32.70	IUUC-Ots-000041

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Drosophila melanogaster

Protein Sequence
(Fasta)

MFTSRASFLA NRRMIFDFSE KNNDIYLDAF GMSDKSSSAT NSLPNSPIHS NNNNPSLLNN 60
NNNNSNGTSS NNSLNVGNNN SNPSLGGSNS NALVSVGSNG IMSAAGLVNN NNNPCSANRN 120

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Nucleotide Sequence
(Fasta)

GCATCTCCTT TCCTTTTTGT TCGTATTGTG CGGTTTCTGC ATTTTTTAAT GTGTTAATTG 60
TGTTTTAAAC TAAAAGCGAA GATAAAATGT TTTGGGTTTT ATAGACATAA AAAAGTGCGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR034196--CELF1/2_RRM1
IPR012677--Nucleotide-bd_a/b_plait
IPR000504--RRM_dom

PROSITE

PS50102--RRM

Pfam

PF00076--RRM_1

SMART

SM00360--RRM

Gene Ontology

GO:0005737--C:cytoplasm
GO:0016604--C:nuclear body
GO:0031965--C:nuclear membrane
GO:0005634--C:nucleus
GO:0043186--C:P granule
GO:0003730--F:mRNA 3'-UTR binding
GO:0003729--F:mRNA binding
GO:0000166--F:nucleotide binding
GO:0003723--F:RNA binding
GO:0036099--P:female germ-line stem cell population maintenance
GO:0007281--P:germ cell development
GO:0007476--P:imaginal disc-derived wing morphogenesis
GO:0002121--P:inter-male aggressive behavior
GO:0007319--P:negative regulation of oskar mRNA translation
GO:0017148--P:negative regulation of translation
GO:0048477--P:oogenesis
GO:0031536--P:positive regulation of exit from mitosis
GO:2000738--P:positive regulation of stem cell differentiation
GO:0000381--P:regulation of alternative mRNA splicing, via spliceosome
GO:0014881--P:regulation of myofibril size
GO:0045214--P:sarcomere organization
GO:0007286--P:spermatid development

KEGG

dme:Dmel_CG31762

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002542	Amborella trichopoda	30.56	8.50e-01	26.60
IUUC-Mla-058818	Melampsora laricipopulina	30.65	1.70e-01	30.00
IUUC-Pgr-103625	Puccinia graminis	30.16	2.00e-05	43.10

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence