iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
DNA & RNA Element
microRNA	RAID2
Protein-protein Interaction
IID	iRefIndex	PINA	Mentha
Protein Expression/Proteomics
GPMDB

Status

Reviewed

Details

Family	Domain	References (PMIDs)
E3 adaptor/Cullin RING/SCF/F-box	F-box	17936033; 18280734

Reviewed

Classification

Family	Identity	E-value	Score	Source Orthology
E3 adaptor/Cullin RING/SCF/F-box	53.29	1.00e-44	177.00	IUUC-Hsa-046735

Organism

Drosophila melanogaster

Protein Sequence
(Fasta)

MNLLDLPQTL IQDILELLPY DEVAKKREVC TLFNYLGQQI LNKGFNKIIM AHAKNFKRIK 60
SMLPRRESER RNHILSRHSD ILTSIETRIS MLTMTYSKFI DLNICCFIPG RVLDEINSIL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GACATCACAG TCTTATTAAA AACAATAGCA ATATTCTCGA CTATAATCGC TCCGCTCGAA 60
ACTAGTAATA AGTATAAACG AGAAATATGA ATCTGTTAGA CTTGCCACAA ACACTAATTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001810--F-box_dom

PROSITE

PS50181--FBOX

Gene Ontology

GO:0019005--C:SCF ubiquitin ligase complex
GO:0000209--P:protein polyubiquitination
GO:0031146--P:SCF-dependent proteasomal ubiquitin-dependent protein catabolic process

KEGG

dme:Dmel_CG3428

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000802	Aegilops tauschii	25.49	8.00e-03	34.70
IUUC-Aml-001643	Ailuropoda melanoleuca	52.29	9.00e-46	176.00
IUUC-Apl-003253	Anas platyrhynchos	56.35	1.00e-40	159.00
IUUC-Aca-004567	Anolis carolinensis	50.91	4.00e-30	122.00
IUUC-Ang-009668	Aspergillus niger	25.61	2.20e-01	28.50
IUUC-Ame-011558	Astyanax mexicanus	53.69	3.00e-45	174.00
IUUC-Bta-013374	Bos taurus	53.29	5.00e-46	177.00
IUUC-Cel-018423	Caenorhabditis elegans	24.11	7.00e-03	35.00
IUUC-Cja-019723	Callithrix jacchus	53.29	6.00e-46	177.00
IUUC-Cfa-020187	Canis familiaris	53.29	7.00e-46	176.00
IUUC-Cpo-021654	Cavia porcellus	53.29	4.00e-46	177.00
IUUC-Csa-024022	Chlorocebus sabaeus	53.29	6.00e-46	177.00
IUUC-Cho-024424	Choloepus hoffmanni	46.41	6.00e-33	133.00
IUUC-Cin-025692	Ciona intestinalis	47.44	3.00e-34	137.00
IUUC-Csv-026080	Ciona savignyi	46.15	8.00e-34	136.00
IUUC-Cgl-026698	Colletotrichum gloeosporioides	37.78	2.40e-02	32.30
IUUC-Dre-028588	Danio rerio	54.86	2.00e-44	171.00
IUUC-Dno-029117	Dasypus novemcinctus	53.29	5.00e-46	177.00
IUUC-Dor-031090	Dipodomys ordii	52.63	1.00e-43	169.00
IUUC-Dse-031513	Dothistroma septosporum	33.33	5.20e-02	28.90
IUUC-Ete-032337	Echinops telfairi	48.68	2.00e-40	159.00
IUUC-Eca-033767	Equus caballus	53.29	1.00e-45	176.00
IUUC-Eeu-035177	Erinaceus europaeus	56.35	1.00e-40	159.00
IUUC-Fca-036035	Felis catus	56.35	2.00e-40	158.00
IUUC-Fal-037596	Ficedula albicollis	56.35	1.00e-40	159.00
IUUC-Fox-038041	Fusarium oxysporum	36.92	3.20e-02	29.30
IUUC-Gmo-038626	Gadus morhua	51.97	2.00e-44	172.00
IUUC-Gga-041259	Gallus gallus	53.95	3.00e-46	177.00
IUUC-Gac-042395	Gasterosteus aculeatus	47.85	2.00e-46	178.00
IUUC-Ggo-045281	Gorilla gorilla	36.31	8.00e-20	90.10
IUUC-Hsa-046735	Homo sapiens	53.29	6.00e-46	177.00
IUUC-Itr-048750	Ictidomys tridecemlineatus	54.74	4.00e-43	167.00
IUUC-Lch-049411	Latimeria chalumnae	54.86	3.00e-44	171.00
IUUC-Loc-052291	Lepisosteus oculatus	48.92	2.00e-46	178.00
IUUC-Lma-053008	Leptosphaeria maculans	34.38	2.00e-03	33.50
IUUC-Laf-053345	Loxodonta africana	52.94	1.00e-44	172.00
IUUC-Mcc-055319	Macaca mulatta	53.29	6.00e-46	177.00
IUUC-Meu-056588	Macropus eugenii	57.26	2.00e-36	145.00
IUUC-Mtr-057635	Medicago truncatula	25.64	2.70e-01	30.80
IUUC-Mga-059617	Meleagris gallopavo	56.35	2.00e-40	158.00
IUUC-Mmr-060648	Microcebus murinus	53.29	1.00e-45	176.00
IUUC-Mdo-062884	Monodelphis domestica	50.29	3.00e-46	177.00
IUUC-Mmu-063401	Mus musculus	53.29	1.00e-45	176.00
IUUC-Mpu-065851	Mustela putorius furo	53.29	6.00e-46	177.00
IUUC-Mlu-068195	Myotis lucifugus	56.35	1.00e-40	159.00
IUUC-Nle-069203	Nomascus leucogenys	53.29	6.00e-46	177.00
IUUC-Opr-070448	Ochotona princeps	49.71	1.00e-45	176.00
IUUC-Ont-071937	Oreochromis niloticus	48.39	1.00e-46	179.00
IUUC-Oan-073133	Ornithorhynchus anatinus	53.29	5.00e-46	177.00
IUUC-Ocu-073883	Oryctolagus cuniculus	53.29	6.00e-46	177.00
IUUC-Ola-087506	Oryzias latipes	48.39	3.00e-46	177.00
IUUC-Olu-087841	Ostreococcus lucimarinus	31.88	4.10e-02	31.60
IUUC-Oga-088778	Otolemur garnettii	53.29	6.00e-46	177.00
IUUC-Oar-089482	Ovis aries	50.67	1.00e-39	156.00
IUUC-Ptr-090499	Pan troglodytes	53.29	6.00e-46	177.00
IUUC-Pan-091794	Papio anubis	61.36	1.00e-10	58.90
IUUC-Psi-093843	Pelodiscus sinensis	56.25	2.00e-40	158.00
IUUC-Pno-094781	Phaeosphaeria nodorum	35.14	4.20e-02	30.40
IUUC-Pfo-096172	Poecilia formosa	48.39	1.00e-46	179.00
IUUC-Pab-098536	Pongo abelii	53.29	6.00e-46	177.00
IUUC-Pca-100276	Procavia capensis	44.08	1.00e-33	135.00
IUUC-Pva-102517	Pteropus vampyrus	53.29	5.00e-46	177.00
IUUC-Rno-104911	Rattus norvegicus	53.29	8.00e-46	176.00
IUUC-Sce-106417	Saccharomyces cerevisiae	44.74	1.40e-01	30.00
IUUC-Sha-107380	Sarcophilus harrisii	52.41	3.00e-40	158.00
IUUC-Sar-112981	Sorex araneus	56.35	2.00e-40	158.00
IUUC-Ssc-115642	Sus scrofa	52.94	1.00e-44	172.00
IUUC-Tgu-117114	Taeniopygia guttata	53.59	4.00e-46	177.00
IUUC-Tru-118076	Takifugu rubripes	48.39	1.00e-46	179.00
IUUC-Tsy-119060	Tarsius syrichta	56.35	2.00e-40	158.00
IUUC-Tni-119916	Tetraodon nigroviridis	46.67	1.00e-19	86.70
IUUC-Tae-124429	Triticum aestivum	25.49	7.00e-03	34.70
IUUC-Tur-126007	Triticum urartu	38.78	1.40e-02	31.20
IUUC-Tbe-128023	Tupaia belangeri	62.79	3.00e-10	58.50
IUUC-Ttr-128756	Tursiops truncatus	53.29	5.00e-46	177.00
IUUC-Vda-129943	Verticillium dahliae	30.56	2.60e-01	32.00
IUUC-Vpa-130447	Vicugna pacos	53.29	5.00e-46	177.00
IUUC-Xtr-132156	Xenopus tropicalis	41.71	4.00e-32	130.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence