SNP - dbSNP |
dbSNP | Type | Alleles | Het | Se(het) | Fxn-class | Gene Name | Assembly | Chr-pos | Sequence | Entrez Gene |
rs11150 | snp | C/T | 0.295529 | 0.245828 | utr-variant-3-prime, synonymous-codon | TLE2 | GRCh38.p7 | 19:2997899 | AAATAACAAATACAT[C/T]GTGACAGGCTCGGGG | 7089 |
rs14089 | snp | A/G | 0.272921 | 0.248947 | utr-variant-3-prime | TLE2 | GRCh38.p7 | 19:2997792 | GGGGAATCAGCAGCC[A/G]GGACAGACATCCTAG | 7089 |
rs83488 | snp | A/G | 0.214239 | 0.247429 | intron-variant | TLE2 | GRCh38.p7 | 19:3006276 | GCGGAGCTCGTAGTC[A/G]CATGGGACAAGGCTT | 7089 |
rs188621 | snp | C/T | 0.0193772 | 0.0965046 | intron-variant | TLE2 | GRCh38.p7 | 19:3017514 | gaagggagctgtgat[C/T]gtgccactgcactcc | 7089 |
rs216267 | snp | C/T | 0.0189856 | 0.0955633 | intron-variant | TLE2 | GRCh38.p7 | 19:3012450 | tccaactcctgttct[C/T]gagtgatcgtcctgc | 7089 |
rs216268 | snp | A/G | 0.108402 | 0.206034 | intron-variant | TLE2 | GRCh38.p7 | 19:3012559 | ATTAGAAACTCCGGG[A/G]TGGGCTCGTGGAGAG | 7089 |
rs216269 | snp | A/G | 0.093777 | 0.195178 | intron-variant | TLE2 | GRCh38.p7 | 19:3012885 | ACCCGCGAGAGAGTG[A/G]ATGGGACGACTGTGG | 7089 |
rs216270 | snp | A/G | 0.493477 | 0.0567349 | intron-variant | TLE2 | GRCh38.p7 | 19:3013229 | CAGGAGGTCCAACTG[A/G]AAACTTGTTCCTATA | 7089 |
rs216271 | snp | A/G | 0.499996 | 0.00139776 | intron-variant | TLE2 | GRCh38.p7 | 19:3013618 | GTAGCGTCTGCTTCG[A/G]GGCCCCCGGGATGAA | 7089 |
rs216272 | snp | A/T | 0.424503 | 0.179021 | intron-variant | TLE2 | GRCh38.p7 | 19:3013973 | GCTGCCTCAGTTTAC[A/T]CATCTGTAAAATGTA | 7089 |
rs216273 | snp | A/G | 0.399983 | 0.200013 | intron-variant | TLE2 | GRCh38.p7 | 19:3014641 | TGGGGGAGAGAGCTC[A/G]TTGTGGTCATGCCCC | 7089 |
rs216274 | snp | A/G | 0.116138 | 0.211142 | intron-variant | TLE2 | GRCh38.p7 | 19:3003987 | gctgagattacaggc[A/G]tgagccactgcaccc | 7089 |
rs216275 | snp | C/G | 0.227959 | 0.249026 | intron-variant | TLE2 | GRCh38.p7 | 19:3004643 | aaaaaaGAGGAGCTT[C/G]GGAGTTAGGAGTTAG | 7089 |
rs216276 | snp | A/G | 0.311859 | 0.242226 | intron-variant | TLE2 | GRCh38.p7 | 19:3004794 | CCTCAGAGCTGTCCC[A/G]GAGTATGGTGTGCAT | 7089 |
rs216277 | snp | C/G | 0.321053 | 0.23969 | intron-variant | TLE2 | GRCh38.p7 | 19:3004843 | CCCTGAATGACAGAA[C/G]AAGGAGCTCACAGCT | 7089 |
rs216278 | snp | C/G | 0.222928 | 0.24853 | intron-variant | TLE2 | GRCh38.p7 | 19:3005110 | CGCTCTCGGCGGCGT[C/G]CAGAGATTAAAGGCT | 7089 |
rs216279 | snp | C/G | 0.128976 | 0.218754 | intron-variant | TLE2 | GRCh38.p7 | 19:3005233 | CCCACAGCTTCCTAT[C/G]AATCAGCTCTTTTGT | 7089 |
rs216280 | snp | A/C | 0.0456336 | 0.143994 | intron-variant | TLE2 | GRCh38.p7 | 19:3006946 | cgccaccatgcctgg[A/C]taagttttttgtatt | 7089 |
rs216281 | snp | C/T | 0.443195 | 0.158668 | intron-variant | TLE2 | GRCh38.p7 | 19:3007321 | tctcaaactcctgac[C/T]tcaaatgatcctccc | 7089 |
rs216282 | snp | A/G | 0.214541 | 0.247473 | intron-variant | TLE2 | GRCh38.p7 | 19:3007370 | gctgggattacaggc[A/G]tgagccaccgggccc | 7089 |
rs216283 | snp | G/T | 0.442926 | 0.158996 | intron-variant | TLE2 | GRCh38.p7 | 19:3007700 | TGGAACACTCAAGGT[G/T]TCTTTGTGGGTCCTC | 7089 |
rs216284 | snp | A/G | 0.279461 | 0.248258 | intron-variant | TLE2 | GRCh38.p7 | 19:3009790 | GCACATGGAAACTCT[A/G]AATGAAAGGCCAGGG | 7089 |
rs216285 | snp | A/G | 0.442791 | 0.15916 | intron-variant | TLE2 | GRCh38.p7 | 19:3009887 | aacaaaagaaaaaaa[A/G]agagagagaaaGTCG | 7089 |
rs306029 | snp | C/T | 0.0100644 | 0.0702206 | intron-variant | TLE2 | GRCh38.p7 | 19:3019516 | TCTTGGGCTGGGGAC[C/T]GCTGGGCTCCTGCCG | 7089 |
rs306030 | snp | C/T | 0.145305 | 0.227022 | intron-variant | TLE2 | GRCh38.p7 | 19:3017961 | GTGGGGTGGTGGGGG[C/T]GGGGGGCTTTATAAA | 7089 |
rs306031 | snp | A/G | 0.142609 | 0.225759 | intron-variant | TLE2 | GRCh38.p7 | 19:3017317 | aaccctgtctctact[A/G]aaaattcaaaaatta | 7089 |
rs306044 | snp | C/T | 0.491421 | 0.0649309 | intron-variant | TLE2 | GRCh38.p7 | 19:3043407 | ggcggatcacgaggt[C/T]aggcgttcgagacca | 7089 |
rs306045 | snp | A/G | 0.128288 | 0.218372 | intron-variant | TLE2 | GRCh38.p7 | 19:3041702 | ggacccagacggagc[A/G]cctctcgaccctcgt | 7089 |
rs306046 | snp | A/C | 0.499187 | 0.0201513 | intron-variant | TLE2 | GRCh38.p7 | 19:3041265 | ctgaggcaggtggat[A/C]atttgaggtcaagag | 7089 |
rs306047 | snp | C/T | 0.0123036 | 0.0774623 | intron-variant | TLE2 | GRCh38.p7 | 19:3040186 | AGAGACGGGAGTCCA[C/T]GGCGATCCTAGGAGG | 7089 |
rs306048 | snp | G/T | 0.499767 | 0.0107802 | intron-variant | TLE2 | GRCh38.p7 | 19:3040156 | GGTGAACCCCCAACT[G/T]GGTACAGAGGGGTTA | 7089 |
rs306049 | snp | C/G | 0.327492 | 0.251694 | intron-variant | TLE2 | GRCh38.p7 | 19:3039492 | gaaaggaagagaaag[C/G]ctggccgtggttcag | 7089 |
rs373172 | snp | A/G | 0.178144 | 0.239451 | intron-variant | TLE2 | GRCh38.p7 | 19:3002899 | AGACGGCGTTTCACC[A/G]TATTGGCCAGGCTGG | 7089 |
rs375069 | snp | C/T | 0.0479149 | 0.147179 | intron-variant | TLE2 | GRCh38.p7 | 19:2999034 | GGCACGGTGGctcgg[C/T]gcttccggaggccga | 7089 |
rs375083 | snp | C/G | 0.487113 | 0.0792303 | intron-variant | TLE2 | GRCh38.p7 | 19:2999040 | GTGGctcggcgcttc[C/G]ggaggccgaggcagg | 7089 |
rs416799 | snp | A/G | 0.165248 | 0.235196 | intron-variant | TLE2 | GRCh38.p7 | 19:2997978 | GGGAAGGGAGAGAGA[A/G]AAGGGCACAGTGAGG | 7089 |
rs513955 | snp | A/G | 0.480853 | 0.0959518 | intron-variant | TLE2 | GRCh38.p7 | 19:3000289 | accatattagccagg[A/G]tggtctcgatctcct | 7089 |
rs518399 | snp | C/T | 0.472896 | 0.113214 | intron-variant | TLE2 | GRCh38.p7 | 19:3000374 | gcgaccgtgcccggc[C/T]GGCaaattttaaatt | 7089 |
rs531153 | snp | C/G | 0.0452528 | 0.143452 | intron-variant | TLE2 | GRCh38.p7 | 19:2998080 | TCCATCTCAAAAAAA[C/G]AAACACGTCACTCTG | 7089 |
rs568827 | snp | A/C | 0.152667 | 0.230274 | intron-variant | TLE2 | GRCh38.p7 | 19:3001649 | ACCTACTGGCTGTTT[A/C]ATTTTTTTGTAGAGA | 7089 |
rs692919 | snp | C/T | 0.481396 | 0.0946345 | intron-variant | TLE2 | GRCh38.p7 | 19:3000164 | gcaagctccacctcc[C/T]gggttcatgccattc | 7089 |
rs818433 | snp | C/G/T | 0 | 0 | intron-variant | TLE2 | GRCh38.p7 | 19:3008641 | tttttagcagagaca[C/G/T]ggtttcaccatgttg | 7089 |
rs818436 | snp | A/G | | | intron-variant | TLE2 | GRCh38.p7 | 19:3018691 | ggaggcggaggttgc[A/G]gtgagccaagatcac | 7089 |
rs902715 | snp | A/T | 0.426201 | 0.177351 | intron-variant | TLE2 | GRCh38.p7 | 19:3034635 | GGAGGCTGGGGGAGA[A/T]GGCTTTTGCAGGAGA | 7089 |
rs902716 | snp | C/G | 0.426047 | 0.177503 | intron-variant | TLE2 | GRCh38.p7 | 19:3034610 | AGGAGACAGTTTTTG[C/G]GTTGGGCCTTGAAAA | 7089 |
rs953155 | snp | C/T | 0.0452528 | 0.143452 | intron-variant | TLE2 | GRCh38.p7 | 19:3023145 | ctgcaacctccaccc[C/T]ccgggttcaagcaat | 7089 |
rs953156 | snp | C/T | 0.509615 | 0.0938218 | intron-variant | TLE2 | GRCh38.p7 | 19:3023276 | CTCCTGACCTCATGA[C/T]CCGCACGCCTTGGCC | 7089 |
rs963178 | snp | C/T | 0.294064 | 0.246086 | intron-variant | TLE2 | GRCh38.p7 | 19:3033939 | GGTGTCTCAGAGCCC[C/T]GGAAGCCAGAGGTGT | 7089 |
rs963179 | snp | C/T | 0.49998 | 0.00319482 | intron-variant | TLE2 | GRCh38.p7 | 19:3033833 | atggggggtgggggt[C/T]gggtctcgctatgtt | 7089 |
rs1058721 | snp | A/C/T | 0 | 0 | utr-variant-3-prime | TLE2 | GRCh38.p7 | 19:2997736 | AACCGTACATCCCAT[A/C/T]TGCTCTCTGGCCAAC | 7089 |
rs1058723 | snp | C/T | 0 | 0 | utr-variant-3-prime | TLE2 | GRCh38.p7 | 19:2997729 | CATCCCATCTGCTCT[C/T]TGGCCAACGGCTTCA | 7089 |
rs1615419 | snp | C/T | 0.499295 | 0.0187567 | intron-variant, upstream-variant-2KB | TLE2 | GRCh38.p7 | 19:3030120 | ACAGCGTTCATGCAC[C/T]ATCTCATTTAAGTGC | 7089 |
rs1617345 | snp | C/G | 0.499234 | 0.0195537 | intron-variant, upstream-variant-2KB | TLE2 | GRCh38.p7 | 19:3029828 | GCCTGGGCAACACAG[C/G]GAGACCCTATCTCTG | 7089 |
rs1654674 | snp | C/G | 0.349671 | 0.229272 | intron-variant | TLE2 | GRCh38.p7 | 19:3036516 | GTGGCCCGGCAGTTC[C/G]GCTGGAGGGGGCGGT | 7089 |
rs1654675 | snp | C/G | 0 | 0 | intron-variant | TLE2 | GRCh38.p7 | 19:3036475 | TGGCGGTGTCGGAAG[C/G]CAAAGGCTTGGCCTC | 7089 |
rs1654677 | snp | C/G | 0.0279526 | 0.114869 | intron-variant | TLE2 | GRCh38.p7 | 19:3034553 | GAGGGGGAGGGAATT[C/G]CAGGAAGAGATAACA | 7089 |
rs1654678 | snp | C/T | 0.152334 | 0.230133 | intron-variant | TLE2 | GRCh38.p7 | 19:3034079 | TGAGATCTGGGGGAC[C/T]TCTAGGGGAGATGCC | 7089 |
rs1654679 | snp | A/G | 0.4711 | 0.116682 | intron-variant, upstream-variant-2KB | TLE2 | GRCh38.p7 | 19:3030420 | GTTGATTGACTTCAC[A/G]AACCTCTCCTGAGGT | 7089 |
rs1688114 | snp | A/G | 0.118584 | 0.212673 | intron-variant | TLE2 | GRCh38.p7 | 19:3037789 | TTTGAAGATTCTATT[A/G]TTAATCTTGTGTTCC | 7089 |
rs1688115 | snp | A/G | 0.0111196 | 0.0737302 | intron-variant | TLE2 | GRCh38.p7 | 19:3037371 | GCACTGCTCAAATGA[A/G]GCAACTCCTATGCAT | 7089 |
rs1688118 | snp | C/G | 0.111576 | 0.20818 | intron-variant | TLE2 | GRCh38.p7 | 19:3034536 | aggaagagataacaa[C/G]cagggaaaggctcag | 7089 |
rs1688126 | snp | A/C | 0.0876345 | 0.190099 | intron-variant, upstream-variant-2KB | TLE2 | GRCh38.p7 | 19:3030972 | GCTTTAAATTTGATA[A/C]GGGCttttttttttt | 7089 |
rs1688127 | snp | C/T | 0.492287 | 0.0616198 | intron-variant, upstream-variant-2KB | TLE2 | GRCh38.p7 | 19:3030440 | TATGCATTTAGTACA[C/T]GTTTGTTGATTGACT | 7089 |
rs1688128 | snp | A/G | 0.499203 | 0.0199521 | intron-variant, upstream-variant-2KB | TLE2 | GRCh38.p7 | 19:3030170 | AGGAACACAATTCCC[A/G]TCTGTGGAAGTTTGC | 7089 |
rs1688134 | snp | C/T | 0.498133 | 0.030494 | intron-variant | TLE2 | GRCh38.p7 | 19:3044903 | cttcacagcattttt[C/T]gctccgcacaattta | 7089 |
rs1826321 | snp | C/T | 0.478603 | 0.101197 | intron-variant | TLE2 | GRCh38.p7 | 19:3008500 | ccgtgccattgcact[C/T]cagcctgggcaatag | 7089 |
rs1844880 | snp | G/T | 0.497245 | 0.0370121 | intron-variant | TLE2 | GRCh38.p7 | 19:3014649 | TGGAGGCAGGGGCAT[G/T]ACCACAATGAGCTCT | 7089 |
rs1975184 | snp | C/T | 0.236144 | 0.249616 | intron-variant | TLE2 | GRCh38.p7 | 19:3025707 | CAGGCAGAGGCAAAG[C/T]CCGTGGCCATTGTAT | 7089 |
rs1975185 | snp | G/T | 0.445328 | 0.156035 | intron-variant | TLE2 | GRCh38.p7 | 19:3023812 | CTCCACCTCCTGGGT[G/T]CAAGCGATTCTCATG | 7089 |
rs1975186 | snp | C/T | 0.445328 | 0.156035 | intron-variant | TLE2 | GRCh38.p7 | 19:3023753 | AGGCGTGCACCACCA[C/T]GCCCGGCTAATTTTT | 7089 |
rs1975187 | snp | C/T | | | intron-variant | TLE2 | GRCh38.p7 | 19:3023721 | tatttttagtagaga[C/T]gggtctccctatgtt | 7089 |
rs1982083 | snp | C/T | 0 | 0 | intron-variant | TLE2 | GRCh38.p7 | 19:3027612 | TTCTGAAGACAGTAT[C/T]TAGCAGTTGGAGCGT | 7089 |
rs2013994 | snp | A/G | 0.499921 | 0.00629039 | intron-variant | TLE2 | GRCh38.p7 | 19:3023059 | TCAAAAAAAAAAAAA[A/G]AAGATTAGGTAAAAT | 7089 |
rs2015037 | snp | A/T | 0.445064 | 0.156365 | intron-variant | TLE2 | GRCh38.p7 | 19:3023120 | TTGCAGTGAGCCGAG[A/T]TCGCACCATTGCACT | 7089 |
rs2116964 | snp | A/G | 0.417521 | 0.185571 | intron-variant | TLE2 | GRCh38.p7 | 19:3023672 | CCCCCGGACTCAAGC[A/G]ATCCGCCCGTGTCAG | 7089 |
rs2163867 | snp | C/T | 0.406296 | 0.19512 | intron-variant | TLE2 | GRCh38.p7 | 19:3023863 | GCTCTGTTACCCAGG[C/T]TGGAGTGCAGTGGCA | 7089 |
rs2163868 | snp | C/T | 0.445724 | 0.155538 | intron-variant | TLE2 | GRCh38.p7 | 19:3023552 | CGTGAAAGATAGTTC[C/T]ACTTCAGAGTGGATA | 7089 |
rs2201123 | snp | C/G | 0.0962929 | 0.197165 | intron-variant | TLE2 | GRCh38.p7 | 19:3023147 | gaattgcttgaaccc[C/G]gggggtggaggttgc | 7089 |
rs2228175 | snp | C/T | 9.08142e-05 | 0.00673787 | synonymous-codon | TLE2 | GRCh38.p7 | 19:3011023 | TTCCACGGACAGCGT[C/T]GGTGAGCACCTTGCC | 7089 |
rs2238621 | snp | A/G | 0.477853 | 0.102875 | intron-variant | TLE2 | GRCh38.p7 | 19:3005278 | TTAGAGAGTTACAGG[A/G]GAAGCCTGTGGATGT | 7089 |
rs2288950 | snp | C/G | 0.479016 | 0.100258 | intron-variant | TLE2 | GRCh38.p7 | 19:3028873 | GGCACCCGGTGAGTG[C/G]GGACTGCGGGGAGGG | 7089 |
rs2304251 | snp | A/T | 0.00119737 | 0.0244387 | intron-variant | TLE2 | GRCh38.p7 | 19:3025269 | CTCGCTCAGCTGAGC[A/T]CGCAGCCTGGTGGGG | 7089 |
rs2542227 | snp | A/G | | | intron-variant | TLE2 | GRCh38.p7 | 19:3003448 | ttcatgaccagcctg[A/G]ccaacatggcgaaaa | 7089 |
rs2873158 | snp | A/G | 0.411074 | 0.191194 | upstream-variant-2KB | TLE2 | GRCh38.p7 | 19:3048767 | tgatccgtccgcctc[A/G]gcctcccaaaatgct | 7089 |
rs2909198 | snp | A/G | 0.487995 | 0.0765403 | intron-variant | TLE2 | GRCh38.p7 | 19:2998275 | tgtgtgtgtgtgtgt[A/G]taatttttttttttt | 7089 |
rs3050847 | in-del | -/AT | 0.441841 | 0.160303 | intron-variant | TLE2 | GRCh38.p7 | 19:3006238 | AAAGGGGTGGGGCTC[-/AT]TGGCCAATCTGAATT | 7089 |
rs3760961 | snp | A/G | 0.335559 | 0.234904 | intron-variant | TLE2 | GRCh38.p7 | 19:3013376 | ACTATGTTTATTTCC[A/G]TGGGATTTCCTATTG | 7089 |
rs3760963 | snp | A/G | 0.0929672 | 0.194527 | intron-variant | TLE2 | GRCh38.p7 | 19:3013626 | TGCTTCGGGGCCCCC[A/G]GGATGAATAAAGTGA | 7089 |
rs3760965 | snp | C/T | 0.403684 | 0.197183 | intron-variant, upstream-variant-2KB | TLE2 | GRCh38.p7 | 19:3030054 | TCAAGCCTCTCTCTT[C/T]GGCCTTCCAAAGTGC | 7089 |
rs3816055 | snp | C/G | 0 | 0 | intron-variant | TLE2 | GRCh38.p7 | 19:3024779 | GCTGTTTTCCCCCTT[C/G]ATGGGAAGCAAGGCA | 7089 |
rs3831629 | in-del | -/AAAAC | 0.330947 | 0.236533 | intron-variant | TLE2 | GRCh38.p7 | 19:3008084 | GAAACTCAGTCTCAG[-/AAAAC]AAAACAAAACAAAAC | 7089 |
rs3834644 | in-del | -/A | | | intron-variant | TLE2 | GRCh38.p7 | 19:3013533 | GGTTTAAAAAAAAAA[-/A]GCACAGGGAAAGGGT | 7089 |
rs3894589 | snp | C/T | 0.5 | 0 | intron-variant | TLE2 | GRCh38.p7 | 19:3000841 | ttttttttttttttt[C/T]ccaagaaagggtctt | 7089 |
rs4061734 | in-del | -/A/AA | 0.483636 | 0.0889627 | intron-variant | TLE2 | GRCh38.p7 | 19:3000824 | aaaaaaaaaaaaaaa[-/A/AA]NGGGAGAGGCCAGAC | 7089 |
rs4257327 | snp | A/C | 0 | 0 | intron-variant | TLE2 | GRCh38.p7 | 19:2999542 | accatcctggctaac[A/C]cggtgaaaccccgtc | 7089 |
rs4270285 | snp | A/G | 0 | 0 | intron-variant | TLE2 | GRCh38.p7 | 19:3043501 | CAGCTTTTAATATCA[A/G]AAAACATCTACCTGG | 7089 |
rs4361051 | snp | C/T | 0.0944967 | 0.195752 | intron-variant | TLE2 | GRCh38.p7 | 19:2999595 | agccaggtgtggtgg[C/T]gggtacctggagtcc | 7089 |
rs4399658 | snp | A/G | | | intron-variant | TLE2 | GRCh38.p7 | 19:3025350 | ACAGATACACCACCC[A/G]CCAGACGCACACCCG | 7089 |
rs4522524 | snp | C/T | 0.478685 | 0.10101 | intron-variant | TLE2 | GRCh38.p7 | 19:3008599 | gggattacaggtgcc[C/T]gccaccacgtccggc | 7089 |
rs4613189 | snp | A/C | 0.272511 | 0.248984 | downstream-variant-500B | TLE2 | GRCh38.p7 | 19:2997155 | TCAACATGGAGAAAC[A/C]TTGTCTCTACTAAAA | 7089 |