SNP - dbSNP |
dbSNP | Type | Alleles | Het | Se(het) | Fxn-class | Gene Name | Assembly | Chr-pos | Sequence | Entrez Gene |
rs8173 | snp | C/G | 0.499598 | 0.0141716 | utr-variant-3-prime | AURKA | GRCh38.p7 | 20:56369735 | AGCTTTACCAGGCTT[C/G]GCCAACCCAATAAGT | 6790 |
rs732417 | snp | C/G | 0.133435 | 0.221162 | upstream-variant-2KB, utr-variant-5-prime, intron-variant | CSTF1, AURKA | GRCh38.p7 | 20:56392009 | AGGAGCGGATGCAAA[C/G]GCGCTGGGCGGGCAC | 6790 |
rs911160 | snp | C/G | 0.494358 | 0.0528145 | intron-variant | AURKA | GRCh38.p7 | 20:56382507 | TGCAGGTAGCTGCTC[C/G]CAATTCCTGCATACC | 6790 |
rs911161 | snp | C/G | 0.17332 | 0.23795 | upstream-variant-2KB, intron-variant | CSTF1, AURKA | GRCh38.p7 | 20:56390750 | CCAGACTACAGGCTG[C/G]AGCCCTTATAAAAAA | 6790 |
rs911162 | snp | A/G | 0.109108 | 0.206518 | upstream-variant-2KB, intron-variant | CSTF1, AURKA | GRCh38.p7 | 20:56391393 | TAACCCCAGGTCTAA[A/G]AAAACAGATTCTGCA | 6790 |
rs1047972 | snp | A/G | 0.257532 | 0.249887 | missense | AURKA | GRCh38.p7 | 20:56386407 | AATTCTTCCCAGCGC[A/G]TTCCTTTGCAAGCAC | 6790 |
rs1468055 | snp | A/C | 0.184838 | 0.241358 | upstream-variant-2KB, intron-variant | CSTF1, AURKA | GRCh38.p7 | 20:56390845 | TTAATTTCACACATG[A/C]TCTAATGCTTTACTT | 6790 |
rs1468056 | snp | C/G | 0.468949 | 0.12067 | upstream-variant-2KB, intron-variant | CSTF1, AURKA | GRCh38.p7 | 20:56390932 | TCAACATTCTTCTGA[C/G]AGAAGCTACAGGCAT | 6790 |
rs1476394 | snp | C/G | 0.110872 | 0.20771 | intron-variant | AURKA | GRCh38.p7 | 20:56372087 | TGGGAACAGCAGACA[C/G]CAAGCCAGAACAGTC | 6790 |
rs2064863 | snp | A/C | 0.466824 | 0.124448 | intron-variant | AURKA | GRCh38.p7 | 20:56387716 | TGCTGCGTTGTGGAC[A/C]GTGTGCTAATTTCAG | 6790 |
rs2104015 | snp | A/G | 0.0887219 | 0.191022 | intron-variant, upstream-variant-2KB, utr-variant-5-prime | CSTF1, AURKA | GRCh38.p7 | 20:56392556 | AAGTAAGATGGCGAG[A/G]AAAGCAAGAGTGGGA | 6790 |
rs2180691 | snp | A/G | 0.49753 | 0.0350569 | intron-variant | AURKA | GRCh38.p7 | 20:56389305 | GACCACTCAAAGTGC[A/G]TCTTCTGCCCTAGTC | 6790 |
rs2230743 | snp | C/T | 0.00202411 | 0.0317483 | missense | AURKA | GRCh38.p7 | 20:56386265 | AGCAGCCCCTGCCAT[C/T]GGCACCTGGTAAACT | 6790 |
rs2236207 | snp | A/G | 0.221439 | 0.248363 | utr-variant-5-prime, upstream-variant-2KB | CSTF1, AURKA | GRCh38.p7 | 20:56392509 | TTGGAGATAAAGTCC[A/G]AGGAGGTGAACTAAC | 6790 |
rs2236208 | snp | C/T | 0.224116 | 0.248656 | intron-variant, upstream-variant-2KB | CSTF1, AURKA | GRCh38.p7 | 20:56392837 | TGCGCCTCTACTTTG[C/T]GTTTCCTAAGTTGCC | 6790 |
rs2273535 | snp | A/T | 0.397355 | 0.201957 | AURKA | 20 | allele_origin=T(germline)/A(germline) | 20:56386485 | GATTCTGACAAGGAA[A/T]TTGCTGAGTCACGAG | 6790 |
rs2298016 | snp | C/G | 0.414701 | 0.188093 | intron-variant | AURKA | GRCh38.p7 | 20:56384240 | TATTCTAGTAGAACA[C/G]TACAGAACTTTGTAA | 6790 |
rs2426615 | snp | G/T | 0.108048 | 0.20579 | intron-variant | AURKA | GRCh38.p7 | 20:56377860 | gagataccaccacat[G/T]ccgattagaataact | 6790 |
rs2426616 | snp | C/G | 0.0919752 | 0.193722 | intron-variant | AURKA | GRCh38.p7 | 20:56383857 | AACCTTTACAATAAA[C/G]AACTAAAACTATAAT | 6790 |
rs3044185 | in-del | -/GAGA | | | intron-variant, upstream-variant-2KB, utr-variant-5-prime | CSTF1, AURKA | GRCh38.p7 | 20:56392564 | TGGCGAGAAAAGCAA[-/GAGA]GAGTGGGACCGATCG | 6790 |
rs3202520 | snp | C/T | 0 | 0 | utr-variant-3-prime | AURKA | GRCh38.p7 | 20:56370000 | GCCTTAACCTCCCTA[C/T]TCAGAAAGCTCCACA | 6790 |
rs3838041 | in-del | -/A | 0.457388 | 0.139608 | intron-variant | AURKA | GRCh38.p7 | 20:56382721 | AATAAATTTATACTT[-/A]AAAAAAAAAAAAGGA | 6790 |
rs4474939 | snp | A/G | 0.0298908 | 0.118541 | upstream-variant-2KB, intron-variant | CSTF1, AURKA | GRCh38.p7 | 20:56390944 | TGACAGAAGCTACAG[A/G]CATTTGCTCCAATTT | 6790 |
rs6014710 | snp | A/C | 0.0178098 | 0.0926698 | intron-variant | AURKA | GRCh38.p7 | 20:56375175 | tgtcacccagcctgg[A/C]ttgctatggcatgat | 6790 |
rs6014711 | snp | A/G | 0.253544 | 0.249975 | intron-variant | AURKA | GRCh38.p7 | 20:56386017 | AAAGGACACCAATTT[A/G]TGCTGTGTCCTCCCT | 6790 |
rs6014712 | snp | C/G | 0.000399281 | 0.0141238 | intron-variant | AURKA | GRCh38.p7 | 20:56388108 | CGACAAGACCAACCT[C/G]CATGTGGGTTTATAA | 6790 |
rs6014713 | snp | C/T | 0.0700422 | 0.173537 | intron-variant | AURKA | GRCh38.p7 | 20:56388264 | TAAAGTGCTGTTGCT[C/T]GATAGGCAGCGTTAC | 6790 |
rs6024836 | snp | A/G | 0.499767 | 0.0107802 | downstream-variant-500B | AURKA, FAM210B | GRCh38.p7 | 20:56369012 | CCAAGGGGGCTGGCA[A/G]CTGCAGTTTTACTGA | 6790 |
rs6024840 | snp | A/G | 0.494187 | 0.0535994 | intron-variant | AURKA | GRCh38.p7 | 20:56381651 | TCAAACAAACTCTTC[A/G]TGTAAAACCAGTGGT | 6790 |
rs6024844 | snp | C/T | 5.01282e-05 | 0.00500616 | intron-variant | AURKA | GRCh38.p7 | 20:56386568 | AAACTTTCTGGCATT[C/T]ATGAAAGCAAAAGAT | 6790 |
rs6024845 | snp | C/T | 0.0704125 | 0.17392 | intron-variant | AURKA | GRCh38.p7 | 20:56387951 | AGAAACTTAAGCAGC[C/T]GATTATAAGACAAAG | 6790 |
rs6024846 | snp | G/T | 0.497803 | 0.033074 | intron-variant, utr-variant-5-prime | AURKA | GRCh38.p7 | 20:56388683 | tgagcgtggtggcag[G/T]cacctgtaatcccag | 6790 |
rs6064386 | snp | C/T | 0 | 0 | synonymous-codon | AURKA | GRCh38.p7 | 20:56388156 | GATTATTCAATTTAC[C/T]TTAACAGGTCCTGAA | 6790 |
rs6064387 | snp | A/G | 0.497121 | 0.0378299 | intron-variant, upstream-variant-2KB | CSTF1, AURKA | GRCh38.p7 | 20:56393103 | AGTTGAGAAGTTAGG[A/G]GTGGGCCACTTAAAA | 6790 |
rs6064388 | snp | C/G/T | 0.00557542 | 0.0525036 | intron-variant, upstream-variant-2KB | CSTF1, AURKA | GRCh38.p7 | 20:56393163 | atacatatatataca[C/G/T]acacatatgtgtgtg | 6790 |
rs6064389 | snp | G/T | 0.499958 | 0.00459246 | intron-variant, upstream-variant-2KB | CSTF1, AURKA | GRCh38.p7 | 20:56393679 | GCAGCTCTAACACAA[G/T]TTATGGGACGGTGAA | 6790 |
rs6069717 | snp | C/T | 0.0113247 | 0.0743914 | missense | AURKA | GRCh38.p7 | 20:56388167 | TTACCTTAACAGGTC[C/T]TGAAATGCAGTTTTC | 6790 |
rs6069718 | snp | C/T | 1.64977e-05 | 0.00287203 | intron-variant | AURKA | GRCh38.p7 | 20:56388223 | AAGAAAAAGAAGAAC[C/T]TTTAATTTGAACAAA | 6790 |
rs6069720 | snp | C/T | 0.277778 | 0.248452 | intron-variant, upstream-variant-2KB | CSTF1, AURKA | GRCh38.p7 | 20:56393133 | ATATATATATATATA[C/T]ACACACACACACATA | 6790 |
rs6069721 | snp | C/T | | | intron-variant, upstream-variant-2KB | CSTF1, AURKA | GRCh38.p7 | 20:56393135 | atatatatatataca[C/T]acacacacacatata | 6790 |
rs6069723 | snp | C/T | 0.375 | 0.216506 | intron-variant, upstream-variant-2KB | CSTF1, AURKA | GRCh38.p7 | 20:56393161 | ATATACATATATATA[C/T]ACACACATATGTGTG | 6790 |
rs6092309 | snp | A/G | 0.0689305 | 0.172377 | intron-variant | AURKA | GRCh38.p7 | 20:56386661 | TAAGAGATGGAAGGT[A/G]AAAAGGTATTTTAAT | 6790 |
rs6092310 | snp | C/T | 0.00874735 | 0.0655527 | intron-variant | AURKA | GRCh38.p7 | 20:56390059 | tcagttcagaagacc[C/T]ccatggctcccaact | 6790 |
rs6099117 | snp | A/G | 0 | 0 | utr-variant-3-prime | AURKA | GRCh38.p7 | 20:56369745 | GGCTTCGCCAACCCA[A/G]TAAGTTACACACTCA | 6790 |
rs6099118 | snp | C/T | 0 | 0 | utr-variant-3-prime | AURKA | GRCh38.p7 | 20:56369873 | GTGAAGACACCATGC[C/T]TAGCACAGGCTGACG | 6790 |
rs6099119 | snp | A/G | 0.0248432 | 0.108648 | utr-variant-3-prime | AURKA | GRCh38.p7 | 20:56369904 | GGGCGGCTGCAGTCG[A/G]ACCTTGCCTCCAGAT | 6790 |
rs6099121 | snp | G/T | 0.213937 | 0.247385 | intron-variant | AURKA | GRCh38.p7 | 20:56378086 | ATGGGAGGATTGCTT[G/T]AGCCAGGGAGTTTGA | 6790 |
rs6099122 | snp | G/T | 0.209084 | 0.246629 | intron-variant | AURKA | GRCh38.p7 | 20:56378228 | caagaggacctcaat[G/T]cattgGTTCCGATAC | 6790 |
rs6099124 | snp | C/T | 0.257454 | 0.249889 | intron-variant | AURKA | GRCh38.p7 | 20:56379919 | agtgagccaagatta[C/T]gccactgcactccag | 6790 |
rs6099125 | snp | G/T | 0.0178098 | 0.0926698 | intron-variant | AURKA | GRCh38.p7 | 20:56386696 | ACCTCCAGAGGATAG[G/T]TAGTATGTGGCTAAG | 6790 |
rs6099126 | snp | C/T | 0.115251 | 0.210577 | intron-variant | AURKA | GRCh38.p7 | 20:56388247 | GAACAAAGCCACCTG[C/T]TTAAAGTGCTGTTGC | 6790 |
rs6099127 | snp | C/T | 0.32627 | 0.238082 | intron-variant, utr-variant-5-prime | AURKA | GRCh38.p7 | 20:56388499 | TGTGCAGCCTACTGG[C/T]ATACCTGCTACCTTA | 6790 |
rs6099128 | snp | G/T | 0.25214 | 0.249991 | intron-variant | AURKA | GRCh38.p7 | 20:56390288 | aggtgtgtagttcag[G/T]ctttcatttcactga | 6790 |
rs6099129 | snp | G/T | 0.141934 | 0.225437 | intron-variant, upstream-variant-2KB | CSTF1, AURKA | GRCh38.p7 | 20:56393583 | TACGAGACTAAAAGT[G/T]GAAGTCAGATGATTA | 6790 |
rs6099130 | snp | G/T | 0.021333 | 0.101051 | intron-variant, upstream-variant-2KB | CSTF1, AURKA | GRCh38.p7 | 20:56394286 | AGTGTCATACAGTGT[G/T]TAAGAAATCAGGCTC | 6790 |
rs6127737 | snp | A/G | 0.394354 | 0.204112 | intron-variant | AURKA | GRCh38.p7 | 20:56388905 | AGCTCCAGAAGAACC[A/G]TCCACACTTGCCACC | 6790 |
rs7273847 | snp | A/G | 0 | 0 | intron-variant | AURKA | GRCh38.p7 | 20:56374232 | caccaacctaaAGTT[A/G]CAACACCATACGGCA | 6790 |
rs7354204 | snp | G/T | 0 | 0 | intron-variant | AURKA | GRCh38.p7 | 20:56382765 | ttaacatgcagagca[G/T]gggagaatcacagga | 6790 |
rs7360388 | snp | C/T | 0.0558544 | 0.157504 | intron-variant, upstream-variant-2KB | CSTF1, AURKA | GRCh38.p7 | 20:56393151 | ACACACACACATATA[C/T]ATATATATACACACA | 6790 |
rs7361468 | snp | C/T | | | intron-variant | AURKA | GRCh38.p7 | 20:56377529 | cgcagtggctcacgc[C/T]tataatcccagcact | 6790 |
rs8117896 | snp | C/T | 0.499663 | 0.0129749 | intron-variant | AURKA | GRCh38.p7 | 20:56381008 | actatcctagccagg[C/T]acaatggtgtgcacc | 6790 |
rs8183282 | snp | A/C | | | intron-variant | AURKA | GRCh38.p7 | 20:56389294 | gccttcatgaggacc[A/C]ctcaaagtgcgtctt | 6790 |
rs10485805 | snp | A/G | 0.453453 | 0.145282 | intron-variant | AURKA | GRCh38.p7 | 20:56370727 | CAGCTGCTAACAATC[A/G]TTAAAGAGTCCACTA | 6790 |
rs10716404 | in-del | -/A | 0 | 0 | intron-variant | AURKA | GRCh38.p7 | 20:56372554 | aaaaaaaaaaaaaaa[-/A]GACTGCAATAGCAGA | 6790 |
rs11411143 | in-del | -/A/AA | 0.5 | 0 | upstream-variant-2KB, intron-variant | CSTF1, AURKA | GRCh38.p7 | 20:56390683 | TCTCAAAAAAAAAAA[-/A/AA]TTAAGATTACCATTT | 6790 |
rs11467339 | in-del | -/CA | | | intron-variant | AURKA | GRCh38.p7 | 20:56374050 | ACACACACACACACA[-/CA]TCAACTGAACCAATT | 6790 |
rs11467613 | in-del | -/AC | 0.5 | 0 | intron-variant | AURKA | GRCh38.p7 | 20:56374017 | ATTATATAGGAGTCT[-/AC]ACACACACACACACA | 6790 |
rs11473393 | in-del | -/GT | 0 | 0 | intron-variant, upstream-variant-2KB | CSTF1, AURKA | GRCh38.p7 | 20:56393189 | TGTGTGTGTGTGTGT[-/GT]ATGTACACCCGGGAT | 6790 |
rs11478522 | in-del | -/A | 0.377187 | 0.215229 | intron-variant | AURKA | GRCh38.p7 | 20:56372534 | AATGACAACCAGTTT[-/A]AAAAAAAAAAAAAAA | 6790 |
rs11480282 | in-del | -/A | 0.441568 | 0.160629 | intron-variant | AURKA | GRCh38.p7 | 20:56386934 | TTTAAGAAAAAGACC[-/A]AAAAAAAAATACGTC | 6790 |
rs11539195 | snp | C/T | 0.029116 | 0.117091 | upstream-variant-2KB, utr-variant-5-prime, intron-variant | CSTF1, AURKA | GRCh38.p7 | 20:56390566 | TAATCCCAGCATTTT[C/T]GGAGGCCGAGGTGGG | 6790 |
rs11539196 | snp | A/C | | | missense | AURKA | GRCh38.p7 | 20:56370541 | CAAAAGGAGGCTTCC[A/C]AACTAAAAATTCATA | 6790 |
rs11696737 | snp | C/G/T | 0 | 0 | intron-variant, upstream-variant-2KB | CSTF1, AURKA | GRCh38.p7 | 20:56393986 | caGTGGTTAAGCTCA[C/G/T]GGATCTGGAGTTGGC | 6790 |
rs12626079 | snp | C/T | 0.00938946 | 0.0678717 | intron-variant | AURKA | GRCh38.p7 | 20:56383198 | GGAATTTGAACACTT[C/T]AGAATGTGAAGAAAA | 6790 |
rs16979823 | snp | A/C | 0.0150606 | 0.0854603 | downstream-variant-500B | AURKA, FAM210B | GRCh38.p7 | 20:56369158 | CTAAGTTCAACACTT[A/C]TACTTTTCCTTCATC | 6790 |
rs16979826 | snp | C/T | 0.0766824 | 0.180169 | intron-variant | AURKA | GRCh38.p7 | 20:56371124 | GATACTTGGTACGAG[C/T]GATGCTGAAATTTTG | 6790 |
rs16979829 | snp | G/T | 0.142947 | 0.22592 | intron-variant | AURKA | GRCh38.p7 | 20:56371994 | TGAACGTAGGCACTG[G/T]ATAGACAGGTATGCC | 6790 |
rs16979832 | snp | A/G | 0.00676609 | 0.0577691 | intron-variant | AURKA | GRCh38.p7 | 20:56373628 | TTAGACATCTCTTCC[A/G]AAAGGAACACAACAT | 6790 |
rs16979865 | snp | A/C | 0.122758 | 0.215196 | upstream-variant-2KB, intron-variant | CSTF1, AURKA | GRCh38.p7 | 20:56391090 | CCAGATTGAAGAACC[A/C]GATGACTTTCACAGG | 6790 |
rs16979877 | snp | A/G | 0.0829062 | 0.185956 | intron-variant, upstream-variant-2KB | CSTF1, AURKA | GRCh38.p7 | 20:56392982 | TGTTCTAGCCTTTCC[A/G]ACTGCGATGTATCCG | 6790 |
rs28403620 | snp | C/T | 0.375 | 0.216506 | intron-variant, upstream-variant-2KB | CSTF1, AURKA | GRCh38.p7 | 20:56393170 | ACACACACACACACA[C/T]ATGTGTGTGTATATA | 6790 |
rs28403621 | snp | A/G | 0.499946 | 0.00519141 | intron-variant, upstream-variant-2KB | CSTF1, AURKA | GRCh38.p7 | 20:56393167 | CACACACACACATAT[A/G]TGTGTGTATATATAT | 6790 |
rs28403622 | snp | A/G | 0.0581099 | 0.160244 | intron-variant, upstream-variant-2KB | CSTF1, AURKA | GRCh38.p7 | 20:56393153 | TGTGTGTGTATATAT[A/G]TGTATATGTGTGTGT | 6790 |
rs28403623 | snp | A/G | 0.109108 | 0.206518 | intron-variant, upstream-variant-2KB | CSTF1, AURKA | GRCh38.p7 | 20:56393147 | TGTATATATATGTAT[A/G]TGTGTGTGTGTGTGT | 6790 |
rs33923703 | snp | A/G | 0.0362995 | 0.129739 | missense | AURKA | GRCh38.p7 | 20:56370253 | CCCAGCCAGAGGCCA[A/G]TGCTCAGAGAAGTAC | 6790 |
rs34120746 | snp | C/T | 0.0238531 | 0.106572 | intron-variant, upstream-variant-2KB | CSTF1, AURKA | GRCh38.p7 | 20:56393057 | GGGATAATTARGCTT[C/T]TGTTTACCTGGCGAG | 6790 |
rs34189236 | snp | A/G | 0.0387552 | 0.1337 | utr-variant-3-prime | AURKA | GRCh38.p7 | 20:56370089 | GAACATGCTACTGAA[A/G]TTTATTTTACCATTG | 6790 |
rs34361943 | snp | A/C | 0.0360462 | 0.12932 | utr-variant-3-prime | AURKA | GRCh38.p7 | 20:56370155 | CAAACAGTCTTAGGA[A/C]TCGTGCAGGGGGAGA | 6790 |
rs34554352 | snp | C/G | 0.00119737 | 0.0244387 | intron-variant, utr-variant-5-prime, upstream-variant-2KB | CSTF1, AURKA | GRCh38.p7 | 20:56392703 | GGATACCAAGAGAAC[C/G]GGACCAGCTGGTACT | 6790 |
rs34572020 | snp | A/G | 0.00264861 | 0.0362945 | missense | AURKA | GRCh38.p7 | 20:56386427 | TGGGAAGAATTTGAA[A/G]GACACAAGACCCGCT | 6790 |
rs34579616 | snp | C/G | 0.00318978 | 0.0398085 | utr-variant-5-prime, upstream-variant-2KB | CSTF1, AURKA | GRCh38.p7 | 20:56392404 | GARCCAACGGCCAGC[C/G]AGACCTGTGGCAGTC | 6790 |
rs34584916 | in-del | -/G | | | intron-variant | AURKA | GRCh38.p7 | 20:56374628 | TAATAGAGATGGGGG[-/G]TCTCACTATGTTGAC | 6790 |
rs34615099 | in-del | -/C | | | intron-variant | AURKA | GRCh38.p7 | 20:56377535 | GCTCACGCCTATAAT[-/C]CCCAGCACTTTGGGA | 6790 |
rs34728205 | in-del | -/A | | | frameshift-variant | AURKA | GRCh38.p7 | 20:56370505 | TATTCTTTTGTAGGT[-/A]CTCTTGGTATGTGTT | 6790 |
rs34841266 | in-del | -/T | | | intron-variant | AURKA | GRCh38.p7 | 20:56379262 | AATTCTGATACCATT[-/T]ATACATGTATATTGG | 6790 |
rs34852291 | snp | A/G | 0.00119737 | 0.0244387 | utr-variant-3-prime | AURKA | GRCh38.p7 | 20:56369532 | GAAAAATAGGAACAC[A/G]TGCTCTACCTCCATT | 6790 |
rs34952971 | in-del | -/A | | | intron-variant | AURKA | GRCh38.p7 | 20:56376180 | ACCTGAAACAACAAA[-/A]CTACAACCCACCATA | 6790 |
rs35055384 | in-del | -/G | | | intron-variant | AURKA | GRCh38.p7 | 20:56382097 | TAACCTGGGAGGCAG[-/G]AGGTTGCAGTGAGCT | 6790 |
rs35106507 | snp | C/G | 0.16976 | 0.236773 | downstream-variant-500B | AURKA | GRCh38.p7 | 20:56369357 | AATTCTTTCCACCAT[C/G]TGTTCATTGTTGGCC | 6790 |
rs35120455 | snp | C/T | | | intron-variant | AURKA | GRCh38.p7 | 20:56374673 | ACTCCTGGCCTCAAG[C/T]GATCCTCCCATCTCA | 6790 |