ESR1
Disease associated variation - ClinVar
Allele IDTypeNameRS#dbSNPPhenotype IDsChromosomeStartStopReferenceAlternate
31629indelNM_001122742.1(ESR1):c.1339_1340delTGinsGC (p.Cys447Ala)121913043MedGen:C40160376152382229152382230TGGC
31629indelNM_001122742.1(ESR1):c.1339_1340delTGinsGC (p.Cys447Ala)121913043MedGen:C40160376152061094152061095TGGC
31630single nucleotide variantESR1, 594G-A-1-na-1-1nana
31631single nucleotide variantNM_001122742.1(ESR1):c.469C>T (p.Arg157Ter)104893956MedGen:C1851467,OMIM:6153636152163748152163748CT
31631single nucleotide variantNM_001122742.1(ESR1):c.469C>T (p.Arg157Ter)104893956MedGen:C1851467,OMIM:6153636151842613151842613CT
31632single nucleotide variantNM_001122742.1(ESR1):c.1091T>A (p.Val364Glu)121913044MedGen:C1851467,OMIM:6153636152265638152265638TA
31632single nucleotide variantNM_001122742.1(ESR1):c.1091T>A (p.Val364Glu)121913044MedGen:C1851467,OMIM:6153636151944503151944503TA
31633single nucleotide variantESR1, IVS1, T-C, -401-1MedGen:C1851473;MedGen:C1851468;MedGen:C0027051,SNOMED CT:C0027051na-1-1nana
75131single nucleotide variantNM_000125.3(ESR1):c.1125G>T (p.Gln375His)397509428MedGen:C1851467,OMIM:6153636152332819152332819GT
75131single nucleotide variantNM_000125.3(ESR1):c.1125G>T (p.Gln375His)397509428MedGen:C1851467,OMIM:6153636152011684152011684GT
204580single nucleotide variantNM_000125.3(ESR1):c.908A>G (p.Lys303Arg)796065354MedGen:C0346153,OMIM:114480,Orphanet:ORPHA227535,SNOMED CT:C03461536151944320151944320AG
204580single nucleotide variantNM_000125.3(ESR1):c.908A>G (p.Lys303Arg)796065354MedGen:C0346153,OMIM:114480,Orphanet:ORPHA227535,SNOMED CT:C03461536152265455152265455AG
Disease associated variation - GWASdb
ChrPosSNP ID(dbSNP 142)RefAltOri SNP IDP-valueDrug NameDrug AnnoGWAS TraitHPO IDDO IDAATypeTrait or Drug
6152163381rs9340799AGrs93407991TAMOXIFENCYTOCHROME P-450 CYP2D6|ESTROGEN RECEPTOR ALPHA|LIPIDS|ESTROGEN RECEPTOR BETADrug response to TamoxifenNANAAintronGWASdb_drug
6152200430rs9322336CTrs93223362.66E-04ALDOSTERONEBIOLOGICAL MARKERS|NATRIURETIC PEPTIDE, BRAIN|RENINBlood pressure, CVD RF and other traits (body mass index (BMI), waist:hip ratio, renin activity in plasma, aldosterone concentration in plasma, BNP levels in plasma, alcohol consumption)HPOID:0011025DOID:10763TintronGWASdb_drug
6152229850rs2347867GArs23478679.68E-04ATORVASTATINSERINE ENDOPEPTIDASES|PYRROLES|PCSK9 PROTEIN, HUMAN|HEPTANOIC ACIDS|APOLIPOPROTEINS E|PROPROTEIN CONVERTASESResponse to statin treatment (atorvastatin), change in cholesterol levelsHPOID:0001626DOID:1287A,GintronGWASdb_drug
6152009638rs2941740AGrs29417402.00E-10Bone mineral density (hip)HPOID:0004348DOID:0080011CnearGene-5GWASdb_trait
6152009638rs2941740AGrs29417400.000481Breast cancerHPOID:0003002DOID:1612CnearGene-5GWASdb_trait
6152009638rs2941740AGrs29417400.00085Breast cancerHPOID:0003002DOID:1612CnearGene-5GWASdb_trait
6152010254rs3020333AGrs30203332.90E-09Bone mineral density (spine)HPOID:0004348DOID:0080011GnearGene-5GWASdb_trait
6152010534rs2982573TCrs29825732.30E-09Bone mineral density (spine)HPOID:0004348DOID:0080011AnearGene-5GWASdb_trait
6152010534rs2982573TCrs29825730.000479Breast cancerHPOID:0003002DOID:1612AnearGene-5GWASdb_trait
6152010561rs2982572CTrs29825720.000476Breast cancerHPOID:0003002DOID:1612GnearGene-5GWASdb_trait
6152012739rs2982571ATrs29825713.90E-09Bone mineral density (spine)HPOID:0004348DOID:0080011TintronGWASdb_trait
6152012739rs2982571ATrs29825710.000808Breast cancerHPOID:0003002DOID:1612TintronGWASdb_trait
6152012956rs3020334AGrs30203343.50E-09Bone mineral density (spine)HPOID:0004348DOID:0080011AintronGWASdb_trait
6152012956rs3020334AGrs30203340.000808Breast cancerHPOID:0003002DOID:1612AintronGWASdb_trait
6152012988rs2941742AGrs29417420.000812Breast cancerHPOID:0003002DOID:1612GintronGWASdb_trait
6152013223rs3020335GTrs30203353.30E-09Bone mineral density (spine)HPOID:0004348DOID:0080011TintronGWASdb_trait
6152013223rs3020335GTrs30203350.000806Breast cancerHPOID:0003002DOID:1612TintronGWASdb_trait
6152013748rs2982570CTrs29825703.10E-09Bone mineral density (spine)HPOID:0004348DOID:0080011AintronGWASdb_trait
6152013748rs2982570CTrs29825700.000869Breast cancerHPOID:0003002DOID:1612AintronGWASdb_trait
6152013760rs3020336GTrs30203360.000832Breast cancerHPOID:0003002DOID:1612GintronGWASdb_trait
6152017691rs1293936TGrs12939363.60E-08Bone mineral density (spine)HPOID:0004348DOID:0080011AintronGWASdb_trait
6152017958rs1293935CGrs12939350.000562Breast cancerHPOID:0003002DOID:1612CintronGWASdb_trait
6152020390rs851985AC,G,Trs8519850.000054Breast cancerHPOID:0003002DOID:1612TintronGWASdb_trait
6152023191rs851984GArs8519840.000072Breast cancerHPOID:0003002DOID:1612CintronGWASdb_trait
6152024415rs851983AGrs8519830.000046Breast cancerHPOID:0003002DOID:1612TintronGWASdb_trait
6152024985rs851982TCrs8519821.30E-08Bone mineral density (spine)HPOID:0004348DOID:0080011AintronGWASdb_trait
6152024985rs851982TCrs8519820.000089Breast cancerHPOID:0003002DOID:1612AintronGWASdb_trait
6152027012rs9383591GCrs93835910.000011Breast cancerHPOID:0003002DOID:1612GintronGWASdb_trait
6152027955rs851980TCrs8519802.93E-04Coronary Artery DiseaseHPOID:0001677DOID:3393AintronGWASdb_trait
6152035710rs8180576CArs81805760.000015Breast cancerHPOID:0003002DOID:1612CintronGWASdb_trait
6152040291rs12525163TCrs125251639.80E-06EndometriosisHPOID:0000130DOID:289CintronGWASdb_trait
6152040291rs12525163TCrs125251630.00087Breast cancerHPOID:0003002DOID:1612CintronGWASdb_trait
6152048022rs1159327CTrs11593272.00E-05EndometriosisHPOID:0000130DOID:289AintronGWASdb_trait
6152051854rs2982565GArs29825651.80E-04Coronary Artery DiseaseHPOID:0001677DOID:3393CintronGWASdb_trait
6152052043rs6899458GArs68994588.62E-04Type 2 diabetesHPOID:0005978DOID:9352AintronGWASdb_trait
6152052043rs6899458GArs68994581.60E-04Coronary Artery DiseaseHPOID:0001677DOID:3393AintronGWASdb_trait
6152052601rs2982562CTrs29825625.80E-09Bone mineral density (spine)HPOID:0004348DOID:0080011GintronGWASdb_trait
6152052652rs2982561CTrs29825618.90E-09Bone mineral density (spine)HPOID:0004348DOID:0080011GintronGWASdb_trait
6152054363rs3020343CTrs30203434.80E-09Bone mineral density (spine)HPOID:0004348DOID:0080011CintronGWASdb_trait
6152054363rs3020343CTrs30203439.60E-05EndometriosisHPOID:0000130DOID:289CintronGWASdb_trait
6152055606rs2982560ATrs29825604.30E-09Bone mineral density (spine)HPOID:0004348DOID:0080011TintronGWASdb_trait
6152056146rs2982558AGrs29825587.00E-09Bone mineral density (spine)HPOID:0004348DOID:0080011TintronGWASdb_trait
6152056369rs201941147GGArs29825573.10E-09Bone mineral density (spine)HPOID:0004348DOID:0080011TintronGWASdb_trait
6152056369rs2982557GArs29825573.10E-09Bone mineral density (spine)HPOID:0004348DOID:0080011TintronGWASdb_trait
6152056842rs2982556GArs29825565.00E-09Bone mineral density (spine)HPOID:0004348DOID:0080011CintronGWASdb_trait
6152057914rs3020348CArs30203482.00E-08Bone mineral density (spine)HPOID:0004348DOID:0080011AintronGWASdb_trait
6152057914rs3020348CArs30203487.50E-05EndometriosisHPOID:0000130DOID:289AintronGWASdb_trait
6152058010rs2982554ACrs29825544.80E-09Bone mineral density (spine)HPOID:0004348DOID:0080011GintronGWASdb_trait
6152058268rs3020349CArs30203495.50E-09Bone mineral density (spine)HPOID:0004348DOID:0080011AintronGWASdb_trait
6152058844rs3020300TArs30203008.00E-09Bone mineral density (spine)HPOID:0004348DOID:0080011TintronGWASdb_trait
6152059563rs2982552GArs29825521.50E-09Bone mineral density (spine)HPOID:0004348DOID:0080011CintronGWASdb_trait
6152059563rs2982552GArs29825521.21E-04Bone properties (heel)HPOID:0000939DOID:11476CintronGWASdb_trait
6152059563rs2982552GArs29825522.00E-10Bone properties (heel)HPOID:0000939DOID:11476CintronGWASdb_trait
6152059563rs2982552GArs29825527.32E-16Bone properties (heel)HPOID:0000939DOID:11476CintronGWASdb_trait
6152061210rs2982551GTrs29825512.10E-09Bone mineral density (spine)HPOID:0004348DOID:0080011AintronGWASdb_trait
6152061210rs2982551GTrs29825510.000565Breast cancerHPOID:0003002DOID:1612AintronGWASdb_trait
6152061474rs2982550GTrs29825500.000623Breast cancerHPOID:0003002DOID:1612AintronGWASdb_trait
6152061579rs3020301TCrs30203012.00E-09Bone mineral density (spine)HPOID:0004348DOID:0080011CintronGWASdb_trait
6152061579rs3020301TCrs30203010.000569Breast cancerHPOID:0003002DOID:1612CintronGWASdb_trait
6152063998rs1415194AGrs14151945.00E-10Bone mineral density (spine)HPOID:0004348DOID:0080011TintronGWASdb_trait
6152064199rs1999807CGrs19998075.20E-10Bone mineral density (spine)HPOID:0004348DOID:0080011CintronGWASdb_trait
6152064464rs3020304CTrs30203041.70E-09Bone mineral density (spine)HPOID:0004348DOID:0080011CintronGWASdb_trait
6152065886rs3020306CTrs30203064.80E-10Bone mineral density (spine)HPOID:0004348DOID:0080011CintronGWASdb_trait
6152067244rs3020307ACrs30203075.40E-10Bone mineral density (spine)HPOID:0004348DOID:0080011AintronGWASdb_trait
6152067500rs9397445TCrs93974450.000124Breast cancerHPOID:0003002DOID:1612TintronGWASdb_trait
6152067869rs1856057AGrs18560573.30E-10Bone mineral density (spine)HPOID:0004348DOID:0080011TintronGWASdb_trait
6152068364rs1999805GArs19998052.00E-08Bone mineral density (spine)HPOID:0004348DOID:0080011CintronGWASdb_trait
6152068364rs1999805GArs19998053.90E-09Bone mineral density (spine)HPOID:0004348DOID:0080011CintronGWASdb_trait
6152068364rs1999805GArs19998053.40E-10Bone mineral density (spine)HPOID:0004348DOID:0080011CintronGWASdb_trait
6152068364rs1999805GArs19998050.00041Breast cancerHPOID:0003002DOID:1612CintronGWASdb_trait
6152068685rs3020308AGrs30203083.70E-10Bone mineral density (spine)HPOID:0004348DOID:0080011AintronGWASdb_trait
6152069791rs2982575AGrs29825758.00E-10Bone mineral density (spine)HPOID:0004348DOID:0080011TintronGWASdb_trait
6152069791rs2982575AGrs29825750.000000046Lumbar spine bone mineral density (premenopausal)HPOID:0004348DOID:0080011TintronGWASdb_trait
6152069791rs2982575AGrs29825750.00036Femoral neck bone mineral density (premenopausal)HPOID:0004348DOID:0080011TintronGWASdb_trait
6152070145rs2152750TCrs21527503.20E-10Bone mineral density (spine)HPOID:0004348DOID:0080011GintronGWASdb_trait
6152073318rs9322330GArs93223300.000239Breast cancerHPOID:0003002DOID:1612GintronGWASdb_trait
6152075487rs2982567GArs29825672.90E-10Bone mineral density (spine)HPOID:0004348DOID:0080011TintronGWASdb_trait
6152077846rs11155811CTrs111558117.40E-10Bone mineral density (spine)HPOID:0004348DOID:0080011CintronGWASdb_trait
6152077895rs11155812CTrs111558120.000709Breast cancerHPOID:0003002DOID:1612CintronGWASdb_trait
6152080665rs4644077ATrs46440770.000849Breast cancerHPOID:0003002DOID:1612AintronGWASdb_trait
6152080735rs1124674TGrs11246741.00E-10Bone mineral density (spine)HPOID:0004348DOID:0080011CintronGWASdb_trait
6152080832rs60945108CTrs609451083.00E-06Obesity-related traitsHPOID:0001513DOID:9970CintronGWASdb_trait
6152082369rs1336981CTrs13369811.00E-08Bone mineral density (spine)HPOID:0004348DOID:0080011AintronGWASdb_trait
6152082646rs9371551GArs93715510.000655Breast cancerHPOID:0003002DOID:1612GintronGWASdb_trait
6152082646rs9371551GArs93715516.45E-04Smoking cessationHPOID:0000707DOID:0050742GintronGWASdb_trait
6152082681rs73780860TCrs737808603.09E-06Obesity-related traitsHPOID:0001513DOID:9970TintronGWASdb_trait
6152082973rs9479107TArs94791070.000787Breast cancerHPOID:0003002DOID:1612TintronGWASdb_trait
6152084862rs2504071TCrs25040711.50E-10Bone mineral density (spine)HPOID:0004348DOID:0080011AintronGWASdb_trait
6152085275rs1890010CTrs18900101.10E-08Bone mineral density (spine)HPOID:0004348DOID:0080011GintronGWASdb_trait
6152085517rs2504069CTrs25040691.10E-08Bone mineral density (spine)HPOID:0004348DOID:0080011G,AintronGWASdb_trait
6152087345rs118028050GArs1180280500.000075Breast cancerHPOID:0003002DOID:1612GintronGWASdb_trait
6152090707rs2504063AGrs25040631.50E-08Bone mineral density (spine)HPOID:0004348DOID:0080011AintronGWASdb_trait
6152090707rs2504063AGrs25040636.00E-11Bone mineral density (spine)HPOID:0004348DOID:0080011AintronGWASdb_trait
6152090707rs2504063AGrs25040635.60E-08Bone mineral densityHPOID:0004348DOID:0080011AintronGWASdb_trait
6152092638rs1415193TArs14151933.50E-09Bone mineral density (spine)HPOID:0004348DOID:0080011TintronGWASdb_trait
6152095167rs2504065GArs25040653.10E-07Bone mineral density (spine)HPOID:0004348DOID:0080011GintronGWASdb_trait
6152110943rs543650TGrs5436501.00E-17HeightHPOID:0000002NACintronGWASdb_trait
6152123593rs79994281CArs799942810.000244Breast cancerHPOID:0003002DOID:1612CintronGWASdb_trait
6152125444rs488133TCrs4881331.20E-10HeightHPOID:0000002NACintronGWASdb_trait
6152125444rs488133TCrs4881331.50E-04HeightHPOID:0000002NACintronGWASdb_trait
6152125444rs488133TCrs4881333.40E-06HeightHPOID:0000002NACintronGWASdb_trait
6152128631rs867239CGrs8672390.000568Breast cancerHPOID:0003002DOID:1612CUTR-5GWASdb_trait
6152129588rs6914438CTrs69144380.000213Breast cancerHPOID:0003002DOID:1612CintronGWASdb_trait
6152130918rs532010AGrs5320109.47E-05Non-alcoholic fatty liver disease histology (other)HPOID:0001397|HPOID:0006561DOID:9452TintronGWASdb_trait
6152131121rs12660738AGrs126607380.000356Breast cancerHPOID:0003002DOID:1612AintronGWASdb_trait
6152131321rs6920483GArs69204830.000625Breast cancerHPOID:0003002DOID:1612GintronGWASdb_trait
6152133187rs3778609CTrs37786090.000158Breast cancerHPOID:0003002DOID:1612CintronGWASdb_trait
6152133351rs3778610AGrs37786100.000514Breast cancerHPOID:0003002DOID:1612AintronGWASdb_trait
6152137404rs13362642AGrs133626420.000664Breast cancerHPOID:0003002DOID:1612AintronGWASdb_trait
6152140867rs9479121CTrs94791210.000739Breast cancerHPOID:0003002DOID:1612CintronGWASdb_trait
6152140940rs9479122GArs94791220.000704Breast cancerHPOID:0003002DOID:1612GintronGWASdb_trait
6152141622rs12523770CTrs125237700.000266Breast cancerHPOID:0003002DOID:1612CintronGWASdb_trait
6152141657rs12523805GTrs125238050.000702Breast cancerHPOID:0003002DOID:1612GintronGWASdb_trait
6152145916rs7771894CTrs77718940.000142Breast cancerHPOID:0003002DOID:1612T,CintronGWASdb_trait
6152146580rs9479126TCrs94791260.000473Breast cancerHPOID:0003002DOID:1612TintronGWASdb_trait
6152148098rs7753153GArs77531533.53E-05IntelligenceHPOID:0000118DOID:1094|DOID:1561AintronGWASdb_trait
6152149667rs17081740TCrs170817402.27E-04Multiple complex diseasesHPOID:0000118NATintronGWASdb_trait
6152151196rs12527007AGrs125270070.000453Breast cancerHPOID:0003002DOID:1612AintronGWASdb_trait
6152153697rs6909023GArs69090232.45E-05vWF levels, in plasmaHPOID:0012146|HPOID:0003125|HPOID:0004936DOID:12531|DOID:12134|DOID:866GintronGWASdb_trait
6152153964rs6937568TCrs69375682.20E-05vWF levels, in plasmaHPOID:0012146|HPOID:0003125|HPOID:0004936DOID:12531|DOID:12134|DOID:866TintronGWASdb_trait
6152155126rs28457010CTrs284570100.000456Breast cancerHPOID:0003002DOID:1612CintronGWASdb_trait
6152157881rs6902771CTrs69027718.00E-06Alcohol dependenceHPOID:0000707DOID:0050741CintronGWASdb_trait
6152160756rs3853251AGrs38532512.29E-04Self-reported allergyHPOID:0002715DOID:0060056TintronGWASdb_trait
6152162317rs9322331CTrs93223312.01E-04Self-reported allergyHPOID:0002715DOID:0060056CintronGWASdb_trait
6152163335rs2234693TCrs22346931.92E-04Smoking initiationHPOID:0000707DOID:0050742CintronGWASdb_trait
6152163381rs9340799AGrs93407991Drug response to TamoxifenNANAAintronGWASdb_trait
6152163381rs9340799AGrs93407992.77E-04Self-reported allergyHPOID:0002715DOID:0060056AintronGWASdb_trait
6152167311rs3936674GArs39366742.07E-04Self-reported allergyHPOID:0002715DOID:0060056CintronGWASdb_trait
6152200430rs9322336CTrs93223362.66E-04Blood pressure, CVD RF and other traits (body mass index (BMI), waist:hip ratio, renin activity in plasma, aldosterone concentration in plasma, BNP levels in plasma, alcohol consumption)HPOID:0011025DOID:10763TintronGWASdb_trait
6152204210rs11155820AGrs111558207.13E-04Multiple complex diseasesHPOID:0000118NAAintronGWASdb_trait
6152229850rs2347867GArs23478673.14E-05Adverse response to chemotherapy (neutropenia/leucopenia) (all anthracycline-based drugs)HPOID:0001875|HPOID:0001882DOID:1227A,GintronGWASdb_trait
6152236879rs9397453GArs93974531.53E-14Multiple complex diseasesHPOID:0000118NAGintronGWASdb_trait
6152271978rs9340907GTrs93409071.34E-08LDL cholesterolHPOID:0010979DOID:1936|DOID:3393GintronGWASdb_trait
6152271978rs9340907GTrs93409077.56E-08Cholesterol, totalHPOID:0003107DOID:3393|DOID:3146|DOID:2349GintronGWASdb_trait
6152285687rs2982694GTrs29826947.00E-10Sudden cardiac arrestHPOID:0001645DOID:3393TintronGWASdb_trait
6152292606rs9340922ACrs93409225.87E-09TriglyceridesHPOID:0003119DOID:3393|DOID:3146|DOID:2349AintronGWASdb_trait
6152295613rs9383951GCrs93839512.00E-06Breast cancerHPOID:0003002DOID:1612GintronGWASdb_trait
6152302212rs7768330AGrs77683305.34E-08TriglyceridesHPOID:0003119DOID:3393|DOID:3146|DOID:2349GintronGWASdb_trait
6152302578rs726281GArs7262811.19E-04Lung function (forced vital capacity)HPOID:0002088DOID:850GintronGWASdb_trait
6152302578rs726281GArs7262818.30E-05Body Mass IndexHPOID:0001507DOID:9970GintronGWASdb_trait
6152313146rs9340941CTrs93409416.90E-04AsthmaHPOID:0002099DOID:2841TintronGWASdb_trait
6152319865rs9340953GArs93409530.000000687Cholesterol, totalHPOID:0003107DOID:3393|DOID:3146|DOID:2349GintronGWASdb_trait
6152340288rs2207232TCrs22072328.86E-04Response to taxane treatment (placlitaxel)HPOID:0100526DOID:1324TintronGWASdb_trait
6152342788rs9340996GTrs93409962.90E-11TriglyceridesHPOID:0003119DOID:3393|DOID:3146|DOID:2349GintronGWASdb_trait
6152358179rs2982712TCrs29827124.00E-10HeightHPOID:0000002NACintronGWASdb_trait
6152383713rs9341023CTrs93410233.50E-33LDL cholesterolHPOID:0010979DOID:1936|DOID:3393CintronGWASdb_trait
6152383713rs9341023CTrs93410234.22E-72HDL cholesterolHPOID:0003107DOID:14502|DOID:1461|DOID:3393CintronGWASdb_trait
6152383713rs9341023CTrs93410238.20E-82Cholesterol, totalHPOID:0003107DOID:3393|DOID:3146|DOID:2349CintronGWASdb_trait
6152383713rs9341023CTrs93410239.51E-18TriglyceridesHPOID:0003119DOID:3393|DOID:3146|DOID:2349CintronGWASdb_trait
6152418236rs9341059CTrs93410595.51E-13LDL cholesterolHPOID:0010979DOID:1936|DOID:3393CintronGWASdb_trait
6152418236rs9341059CTrs93410596.06E-20HDL cholesterolHPOID:0003107DOID:14502|DOID:1461|DOID:3393CintronGWASdb_trait
6152421130rs3798577TCrs37985772.31E-05HeightHPOID:0000002NATUTR-3GWASdb_trait
6152421130rs3798577TCrs37985773.58E-05Lung function (forced vital capacity)HPOID:0002088DOID:850TUTR-3GWASdb_trait
6152422455rs9341074TArs93410740.000000423TriglyceridesHPOID:0003119DOID:3393|DOID:3146|DOID:2349TUTR-3GWASdb_trait
6152424243rs3798757TCrs37987570.00000141HDL cholesterolHPOID:0003107DOID:14502|DOID:1461|DOID:3393AUTR-3GWASdb_trait
Disease associated variation - OMIM
Ensembl_gene_ID Approved Gene Symbol MIM Number
ENSG00000091831.21 ESR1 133430