iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

SNP - dbSNP
dbSNP	Type	Alleles	Het	Se(het)	Fxn-class	Gene Name	Assembly	Chr-pos	Sequence	Entrez Gene
rs13414	snp	C/T	0.286564	0.247312	utr-variant-3-prime, upstream-variant-2KB, intron-variant	RNF43, SUPT4H1, TSPOAP1-AS1	GRCh38.p7	17:58354092	GGAAAAGTTTTGTCT[C/T]AGAGCAAGGATGGAA	54894
rs720236	snp	C/T	0.0356815	0.128715	intron-variant	RNF43	GRCh38.p7	17:58408459	TCCTTTGGATGCACG[C/T]TAATATCCTAAAATC	54894
rs723991	snp	A/G	0.466618	0.124806	intron-variant, upstream-variant-2KB	RNF43	GRCh38.p7	17:58404678	CAATAATAAGAAAAT[A/G]GTACTAGAAACAATT	54894
rs757484	snp	C/G	0.168785	0.236441	intron-variant	RNF43	GRCh38.p7	17:58379736	AGATAATTAGCTCTT[C/G]TTCTCCTTACCTTCT	54894
rs917016	snp	A/G	0.160609	0.233472	intron-variant	RNF43	GRCh38.p7	17:58376795	CATGAGCCCTCCACA[A/G]CCACACCCTTCTCAA	54894
rs1047285	snp	G/T	0	0	intron-variant	RNF43	GRCh38.p7	17:58376405	GATATAATTGTACTA[G/T]AAAGATCATGTTACt	54894
rs1476596	snp	C/T	0.465578	0.126594	intron-variant	RNF43	GRCh38.p7	17:58407997	ACAAAGATCTTCTTA[C/T]GTGTAGTAAATGAAT	54894
rs1811202	snp	A/C	0.488726	0.0742286	intron-variant	RNF43	GRCh38.p7	17:58377074	TCTGTCTTGGGAGGG[A/C]GGGGAAAAAATCAGA	54894
rs1990008	snp	C/G	0.469148	0.120308	intron-variant	RNF43	GRCh38.p7	17:58382047	TTTCTGGGGACTGAG[C/G]GCTGGTCAAAGGATT	54894
rs2017770	snp	A/G			intron-variant	RNF43	GRCh38.p7	17:58401071	TATCTCTGAAGTCAG[A/G]CCACCATGCAAAGTT	54894
rs2018966	snp	C/T	0.16911	0.236552	intron-variant	RNF43	GRCh38.p7	17:58400204	CCACCCCAGAACTCA[C/T]ATACTATTAGTCATT	54894
rs2021733	snp	A/G	0.161596	0.233848	intron-variant	RNF43	GRCh38.p7	17:58411807	CCACCACTTCTAAAA[A/G]TGATTACAGTCATAT	54894
rs2107547	snp	A/G	0.274393	0.248807	intron-variant	RNF43	GRCh38.p7	17:58355382	CTTAATGCATCTCTC[A/G]TGACTCCTGTCCTGT	54894
rs2158459	snp	C/T	0.0130733	0.0797856	intron-variant	RNF43	GRCh38.p7	17:58355015	CCTGACCCTCAATGA[C/T]CTCTTTCCTCCCCGC	54894
rs2158460	snp	C/G	0.271837	0.249072	intron-variant	RNF43	GRCh38.p7	17:58355001	ACCTCTTTCCTCCCC[C/G]CTCTCTAAATACAGG	54894
rs2189681	snp	C/G	0.499987	0.00259581	intron-variant	RNF43	GRCh38.p7	17:58397545	ctcctgagtagttgg[C/G]attacaggtgcctgc	54894
rs2189682	snp	A/G	0.161596	0.233848	intron-variant	RNF43	GRCh38.p7	17:58405178	AGGCAGGAGAATGGC[A/G]TGAACCCGGGAGGTG	54894
rs2240258	snp	G/T	0.225301	0.248777	intron-variant	RNF43	GRCh38.p7	17:58380822	AGCCTCTGAGCAGGA[G/T]ACTAAGCCTGAAAGA	54894
rs2240259	snp	G/T	0.277334	0.248501	intron-variant	RNF43	GRCh38.p7	17:58380768	ATGTTAATGAAGCTA[G/T]TTCGCACTCTTGCAC	54894
rs2254839	snp	A/G	0.0448719	0.142907	intron-variant	RNF43	GRCh38.p7	17:58414236	AAAGAATACATGTTT[A/G]GGAATAAGTTCTATA	54894
rs2257205	snp	A/G	0.274325	0.248821	missense, utr-variant-5-prime	RNF43	GRCh38.p7	17:58370936	CTCGACGGGCCCCCC[A/G]CCCCTGCCTGTCACT	54894
rs2285989	snp	C/G/T	0.0228947	0.104514	intron-variant	RNF43	GRCh38.p7	17:58362726	TAGCTATGTGCCTCC[C/G/T]GGGCTCCTGTGTTTC	54894
rs2285990	snp	A/G	0.0105575	0.0718839	missense	RNF43	GRCh38.p7	17:58362569	CGGTGCTGCGCATCC[A/G]GTGCCGCCCCCGCCA	54894
rs2301867	snp	A/T	0.46845	0.121572	intron-variant, utr-variant-5-prime	RNF43	GRCh38.p7	17:58402713	TAGTGTCACAGCCTC[A/T]TCTCTGGGACCTGAA	54894
rs2428680	snp	A/G	0.0704125	0.17392	intron-variant	RNF43	GRCh38.p7	17:58386540	GAAGGGAAGAAACAC[A/G]TACTTTTGAGTGATT	54894
rs2450509	snp	C/T	0.152667	0.230274	intron-variant	RNF43	GRCh38.p7	17:58368789	TTACAATTTATTTTC[C/T]CATGAGATAACTTGT	54894
rs2526367	snp	A/G	0.169435	0.236663	intron-variant	RNF43	GRCh38.p7	17:58393389	atggagttttgctct[A/G]gatgcccaggctggg	54894
rs2526368	snp	A/C	0.16911	0.236552	intron-variant	RNF43	GRCh38.p7	17:58392949	gttgtttaagggtca[A/C]ctgTAATGTCAAATG	54894
rs2526369	snp	A/G	0.16911	0.236552	intron-variant	RNF43	GRCh38.p7	17:58391752	TGTGTCGGCATCTCT[A/G]TGAGGTGCTTTGGAA	54894
rs2526370	snp	C/G	0.499839	0.00898417	intron-variant	RNF43	GRCh38.p7	17:58410275	GAAGCCTGGCACCCA[C/G]AGAATAGAAGGAAGC	54894
rs2526371	snp	C/T	0.215144	0.247558	intron-variant	RNF43	GRCh38.p7	17:58366184	AGGTCTGGAAGCTTC[C/T]GTTTCTATTCCTTTG	54894
rs2526372	snp	C/T	0.174288	0.23826	intron-variant	RNF43	GRCh38.p7	17:58363165	GAGAGATCCTGGAAA[C/T]CCTCTAGTCCAACTT	54894
rs2526373	snp	A/G	0.101658	0.201233	intron-variant	RNF43	GRCh38.p7	17:58362203	AGTAAAATCTATAAT[A/G]TTTTAGATGGTGATA	54894
rs2526374	snp	A/C	0.478863	0.100608	missense	RNF43	GRCh38.p7	17:58358524	GCACAAGGCTGGGGA[A/C]TGAGCCACCTCCAAT	54894
rs2632506	snp	G/T	0.16911	0.236552	intron-variant	RNF43	GRCh38.p7	17:58390047	AGAGCACATGACGGG[G/T]TGCAGGGCAGCATGT	54894
rs2632509	snp	C/T	0.158302	0.232576	intron-variant	RNF43	GRCh38.p7	17:58410526	TACTCTGTACTTCTT[C/T]TAAAGGCTGGCATCA	54894
rs2632510	snp	A/G	0.0448719	0.142907	intron-variant	RNF43	GRCh38.p7	17:58413197	CCAGAAGTGTAAACC[A/G]TGTGTCCCTAACACA	54894
rs2632511	snp	A/G	0.162253	0.234095	intron-variant	RNF43	GRCh38.p7	17:58413628	GTAAGATTTGCCAGA[A/G]TGAGAAAAACGATAG	54894
rs2632512	snp	C/T	0.160609	0.233472	intron-variant	RNF43	GRCh38.p7	17:58374461	GCAGTGGTGCAATCT[C/T]GGCTTGCTGCAACCT	54894
rs2632513	snp	C/T	0.359575	0.224707	intron-variant	RNF43	GRCh38.p7	17:58370691	ACCTTCATCCCAGCA[C/T]GCTCCCCATCCCACC	54894
rs2632514	snp	C/T	0.152667	0.230274	intron-variant	RNF43	GRCh38.p7	17:58369073	GTGTGTGTGTGTGTG[C/T]GTGTATGAGAGAGAG	54894
rs2632515	snp	C/T	0.152667	0.230274	intron-variant	RNF43	GRCh38.p7	17:58367522	TACCATGGAGGCCAC[C/T]ACCTGGTAGTAAAGA	54894
rs2632517	snp	C/T	0.0659589	0.169201	intron-variant	RNF43	GRCh38.p7	17:58363113	TGGGCAAGTTTTCCC[C/T]CGTCTTTGGGCCTCA	54894
rs2632519	snp	C/T	0.470618	0.117591	downstream-variant-500B, upstream-variant-2KB, nc-transcript-variant	RNF43, SUPT4H1, TSPOAP1-AS1	GRCh38.p7	17:58352403	GCCCGCTGACTACCC[C/T]ACACAGCCTCCGCCG	54894
rs2632528	snp	C/G	0.0569829	0.158885	intron-variant	RNF43	GRCh38.p7	17:58401816	TTTTTTTTATGCTAG[C/G]AATATATGGATAAAA	54894
rs2632529	snp	A/G	0.0569829	0.158885	intron-variant	RNF43	GRCh38.p7	17:58398328	CCAGTCTCTTATATT[A/G]TTTCATGCCAAAAAT	54894
rs2632530	snp	A/G	0.0569829	0.158885	intron-variant	RNF43	GRCh38.p7	17:58395963	AGGCTACATCCTAAC[A/G]GTTGTGTCTTCCCAT	54894
rs2680687	snp	C/T	0.16911	0.236552	intron-variant	RNF43	GRCh38.p7	17:58414605	ATAAAGAATAGGCCA[C/T]GTATGAATGACTTAC	54894
rs2680688	snp	A/G	0.378372	0.214524	intron-variant	RNF43	GRCh38.p7	17:58373163	GGAGAAGGCTGGACC[A/G]TGTGGGGAGGGTCGA	54894
rs2680692	snp	A/G	0	0	intron-variant	RNF43	GRCh38.p7	17:58371279	CAAGCTCTTCATTTA[A/G]GTCCCCTCTGGGACA	54894
rs2680693	snp	A/G	0	0	intron-variant	RNF43	GRCh38.p7	17:58369907	CTCACAGGACCTTTA[A/G]ACCTTTGCCTGTGAC	54894
rs2680694	snp	C/T	0.16911	0.236552	intron-variant	RNF43	GRCh38.p7	17:58392508	TCCCTACAACTAAGA[C/T]GTATAAATCTAAAGT	54894
rs2680695	snp	A/G	0.161596	0.233848	intron-variant	RNF43	GRCh38.p7	17:58393302	gtcccagctacttgg[A/G]acgctgaggcaggag	54894
rs2680696	snp	C/T	0.161596	0.233848	intron-variant	RNF43	GRCh38.p7	17:58395652	CTAAATAAAAAAGAG[C/T]AGACTTGTTTTGCAG	54894
rs2680697	snp	A/T	0.169435	0.236663	intron-variant	RNF43	GRCh38.p7	17:58401350	ATATTGGAACATCCA[A/T]GTGTTTGGGTATGCA	54894
rs2680698	snp	C/T	0.449345	0.150869	intron-variant	RNF43	GRCh38.p7	17:58368023	CTTTTTTAGCTCACC[C/T]CTCTAAGCCAGCCTC	54894
rs2680699	snp	A/G	0.449218	0.151037	intron-variant	RNF43	GRCh38.p7	17:58367983	ATCTGTAAAAGGGGA[A/G]TAATAATGGGACTTG	54894
rs2680700	snp	A/C	0.372189	0.218105	intron-variant	RNF43	GRCh38.p7	17:58363181	AGACTCCTGGAGCTG[A/C]GAGAGATCCTGGAAA	54894
rs2680701	snp	C/T	0.252616	0.249986	missense	RNF43	GRCh38.p7	17:58360940	CCTCTTCCCAGGATC[C/T]GCTTCAGCAGAGAAC	54894
rs2680702	snp	C/T	0.400504	0.199621	utr-variant-3-prime, upstream-variant-2KB, intron-variant	RNF43, SUPT4H1, TSPOAP1-AS1	GRCh38.p7	17:58354188	ATTTCTGCTGGACTT[C/T]ATCTGGGCAGAGGAA	54894
rs2680703	snp	C/T	0.441158	0.161117	downstream-variant-500B, upstream-variant-2KB, nc-transcript-variant	RNF43, SUPT4H1, TSPOAP1-AS1	GRCh38.p7	17:58352312	AGCCTCCCCGCCTGC[C/T]GGCGGGAGAAACCAT	54894
rs2680705	snp	A/G	0.163892	0.234703	upstream-variant-2KB, utr-variant-5-prime	RNF43	GRCh38.p7	17:58418223	ACCTCCCAAAGATTG[A/G]AAAGAAAATAACAGT	54894
rs2680707	snp	C/T	0.165853	0.235413	intron-variant	RNF43	GRCh38.p7	17:58378280	TATTTATTTTTGAGA[C/T]AGGGTCTTGCTCTGT	54894
rs2680708	snp	A/G	0.499942	0.00539106	intron-variant	RNF43	GRCh38.p7	17:58378759	GGGGTGCTGGTGAGC[A/G]AAAGAGCTGACAAGA	54894
rs2680711	snp	C/T	0.0452528	0.143452	intron-variant	RNF43	GRCh38.p7	17:58404896	ACTTTCTAAAATGTA[C/T]CAATCAGTCCCTGTT	54894
rs2877877	snp	A/G	0.293037	0.246268	utr-variant-3-prime, upstream-variant-2KB, intron-variant	RNF43, SUPT4H1, TSPOAP1-AS1	GRCh38.p7	17:58354169	TTCTACCTTCATTCC[A/G]TCCTTCCTCTGCCCA	54894
rs3030929	in-del	-/CTTAACTTA			intron-variant	RNF43	GRCh38.p7	17:58377045	TCTCCCTGTGTCCTC[-/CTTAACTTA]TTTGTTCTGATTTTT	54894
rs3030932	in-del	-/CCC			intron-variant	RNF43	GRCh38.p7	17:58380240	GAGTACCACTGAGCC[-/CCC]TTGTTTAGCTAGGTC	54894
rs3030936	in-del	-/A	0	0	intron-variant	RNF43	GRCh38.p7	17:58401839	AAAAAAAAAAAAAAA[-/A]CCTATAATCTAATAC	54894
rs3744093	snp	A/G	0.481874	0.0934578	missense, intron-variant	RNF43	GRCh38.p7	17:58415439	GCAGAACAGAAAGCT[A/G]TTATCAGAGTGATCC	54894
rs3785492	snp	A/G	0.283684	0.24772	intron-variant	RNF43	GRCh38.p7	17:58410702	CTTATAATGTAACAT[A/G]TTTCATCACCTTTCT	54894
rs3785493	snp	A/C	0.226484	0.248892	intron-variant	RNF43	GRCh38.p7	17:58394758	ACTGGAGAGGTAACT[A/C]TTGCAGGTACACTTC	54894
rs3837804	in-del	-/GCAAGTCTCTAAGACTC	0.274124	0.248833	intron-variant	RNF43	GRCh38.p7	17:58399421	CTTGGAAATTATCCC[-/GCAAGTCTCTAAGACTC]TCAGTTCCCTATCTG	54894
rs3837805	in-del	-/T	0.499982	0.00299515	intron-variant	RNF43	GRCh38.p7	17:58388703	AAGATCCATCTCCTT[-/T]GACAAATCCTGTAGG	54894
rs4793583	snp	G/T	0.4776	0.103433	intron-variant	RNF43	GRCh38.p7	17:58374046	GATTGTTCTATGCAC[G/T]TTTTCATATTAACTC	54894
rs4793585	snp	A/G	0.466412	0.125164	intron-variant	RNF43	GRCh38.p7	17:58393150	cggtgacttatgcct[A/G]taatcccagcacttt	54894
rs4793588	snp	A/C	0.161924	0.233971	intron-variant	RNF43	GRCh38.p7	17:58393690	AATTTAATGTTTGCG[A/C]TTCATTGTAATACTT	54894
rs4793941	snp	A/G	0.468249	0.121932	intron-variant	RNF43	GRCh38.p7	17:58395005	GTGGCACATGGTGCT[A/G]TGCAGGCAAGTATAT	54894
rs4793942	snp	A/G	0.0248432	0.108648	intron-variant	RNF43	GRCh38.p7	17:58395059	TCGGTTTGCTGTATA[A/G]TAAGTCTGTTTGGAC	54894
rs4793946	snp	A/G	0.0341408	0.126114	intron-variant	RNF43	GRCh38.p7	17:58416987	GCAGAGGGAGGGGGG[A/G]AAAAGGAATTTCAAA	54894
rs5821226	in-del	-/CTTAA	0.488726	0.0742286	intron-variant	RNF43	GRCh38.p7	17:58377045	TCTCCCTGTGTCCTC[-/CTTAA]CTTATTTGTTCTGAT	54894
rs5821227	in-del	-/ACTTA			intron-variant	RNF43	GRCh38.p7	17:58377049	CCTGTGTCCTCCTTA[-/ACTTA]TTTGTTCTGATTTTT	54894
rs5821228	in-del	-/A	0.468349	0.121752	intron-variant	RNF43	GRCh38.p7	17:58381910	CTTGGTTCTATAGAG[-/A]AAAAAAAATGGCACC	54894
rs5821229	in-del	-/A			intron-variant	RNF43	GRCh38.p7	17:58401824	ATATATTCCTAGCAT[-/A]AAAAAAAAAAAAAAA	54894
rs6503859	snp	C/G	0.419296	0.183954	intron-variant	RNF43	GRCh38.p7	17:58383491	tatttttggtaaaga[C/G]agggtctccctgtgt	54894
rs6503862	snp	A/T	0.163892	0.234703	intron-variant	RNF43	GRCh38.p7	17:58406770	CTTTTTTTTTTTTTT[A/T]AAATAGCAAAATAAG	54894
rs7211294	snp	A/G	0.390651	0.206682	intron-variant	RNF43	GRCh38.p7	17:58385422	CCTATTTCAGTTAAC[A/G]GCACCACCATTTTCC	54894
rs7215531	snp	A/T	0.400504	0.199621	intron-variant	RNF43	GRCh38.p7	17:58416013	TAAACAGCTAAGGCC[A/T]TGCATCAAAGGTGAG	54894
rs7216856	snp	A/G	0.425277	0.178263	intron-variant	RNF43	GRCh38.p7	17:58394934	TATGGAGGCACAATG[A/G]TTCAGCTATTCCACC	54894
rs7218637	snp	A/G	0.184521	0.241273	intron-variant	RNF43	GRCh38.p7	17:58368606	aaatcccagctactc[A/G]ggaggctgaggcagg	54894
rs7219031	snp	A/G	0.152667	0.230274	intron-variant	RNF43	GRCh38.p7	17:58368547	gcgagactccatctc[A/G]ttaaaaaaaaaaaaa	54894
rs7219859	snp	A/G	0.301681	0.2446	utr-variant-3-prime, upstream-variant-2KB, nc-transcript-variant	RNF43, SUPT4H1, TSPOAP1-AS1	GRCh38.p7	17:58353389	ATTTGCCCAAGGTCT[A/G]AGTCACTGAAGTATG	54894
rs7221205	snp	A/G	0.42803	0.175514	intron-variant	RNF43	GRCh38.p7	17:58408438	TTAAGTACTAAGAAG[A/G]TAAGGTCCTTTGGAT	54894
rs7502645	snp	A/G			intron-variant	RNF43	GRCh38.p7	17:58400349	CAGTCTTGCTTAGTT[A/G]TGTTAAGCTGATGCC	54894
rs7502856	snp	G/T	0	0	intron-variant	RNF43	GRCh38.p7	17:58356047	AGGGAGATAGTGGTG[G/T]GGTACTGGCAGCACT	54894
rs8065321	snp	A/C	0.0554779	0.157039	intron-variant	RNF43	GRCh38.p7	17:58366905	atctcagctcactgc[A/C]gtttccgcctcccgg	54894
rs8067183	snp	A/G	0.419456	0.183806	intron-variant	RNF43	GRCh38.p7	17:58384662	TGGCTTCTGGGCATC[A/G]GTTTCAGGTACTAAA	54894
rs8070135	snp	A/G	0.439363	0.163222	intron-variant	RNF43	GRCh38.p7	17:58381702	AGTAGCATCTCTTGC[A/G]CTCCTAGGAACTAAA	54894
rs8072522	snp	C/T	0.0535932	0.154675	intron-variant	RNF43	GRCh38.p7	17:58400313	AAAGCCTTGTCCTTT[C/T]GGCTACATTAAAAAT	54894
rs8078280	snp	A/G	0.274929	0.248754	intron-variant	RNF43	GRCh38.p7	17:58395771	CAAAGGGATGACTAT[A/G]AACATTTTATCAACA	54894

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