DNA & RNA Element - UTRdb Gene Name Type ASPicDB UTRaspic Refseq ID Genome NEDD8 3'UTR 2ed4826d65 BA071433 NM_006156 chr14:23755897-23771312:- NEDD8 5'UTR 2ed4826d65 CA111306 NM_006156 chr14:23756174-23771416:-

DNA & RNA Element - CircNet Circ ID GITPosition Express Symbol Entrez Category Strand Refered Name hsa-circ-NEDD8-antisense.1 NM_006156Tchr14:24686076-24686315 expressed NEDD8 4738 protein-coding + hsa_circ_0101489 hsa-circ-NEDD8-overlap.1 NM_006156Tchr14:24687264-24687637 expressed NEDD8 4738 protein-coding - not_available

DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0004609 hsa-miR-149* 4738 NEDD8 cgUGUCGGGGGC-AGGGAGGGa |:|||| |:| ||||||| ccAUAGCCACUGCCCCCUCCCc 2 20 74 95 [hg19:14:24686238-24686259:-] 0.6923 162 7 -31.99 -0.2488 MIMAT0000755 hsa-miR-323-3p 4738 NEDD8 ucuCCAGCUGGCACAUUACAc || :| || ||||||| ccuGGAUG-CCCAGUAAUGUa 2 19 94 113 [hg19:14:24686220-24686239:-] 0.7062 148 7 -11.92 -0.6869 MIMAT0009201 hsa-miR-196b* 4738 NEDD8 cuuccgucacagcacGACAGCu |||||| uuuuaccucuuuaccCUGUCGc 2 8 12 33 [hg19:14:24686300-24686321:-] 0.6713 120 6 -9.65 -0.1673 MIMAT0004762 hsa-miR-486-3p 4738 NEDD8 uaggacaugacucGACGGGGc ||||||| gacaccauagccaCUGCCCCc 2 9 70 90 [hg19:14:24686243-24686263:-] 0.6923 140 7 -14.83 -0.6069 MIMAT0002833 hsa-miR-520a-5p 4738 NEDD8 ucUUUCAUGAAG----GGA-GACCUc ||| ||:||| ||| ||||| auAAAAUAUUUCCUGGCCUCCUGGAa 2 20 245 270 [hg19:14:24686063-24686088:-] 0.7201 126 0 -13.93 -0.7009 MIMAT0004776 hsa-miR-505* 4738 NEDD8 uguagUUAUGAAGGACC-GAGGg ||||:||||||| |||| aauaaAAUAUUUCCUGGCCUCCu 2 18 244 266 [hg19:14:24686067-24686089:-] 0.7201 145 0 -26.29 -0.9267 MIMAT0002883 hsa-miR-514 4738 NEDD8 agaugagugucuucACAGUUa |||||| acugugucccugguUGUCAAu 2 8 226 246 [hg19:14:24686087-24686107:-] 0.7201 120 6 -12.24 -0.1200 MIMAT0002888 hsa-miR-532-5p 4738 NEDD8 ugcCAG-GA-UGUGAGUUCCGUAc ||| || |:| | :|||||| ccuGUCGCUCAUAAU-GAGGCAUc 2 20 26 48 [hg19:14:24686285-24686307:-] 0.6713 135 6 -18.87 -0.1526 MIMAT0004780 hsa-miR-532-3p 4738 NEDD8 acGUUCGGAACCCACACCCUCc :| |:|| | ||||||| ugUAUGUCUACUG-GUGGGAGa 2 21 110 130 [hg19:14:24686203-24686223:-] 0.7201 146 7 -19.60 -0.7788 MIMAT0003220 hsa-miR-556-5p 4738 NEDD8 gaguauAAUGUUAC-UCGAGUAg |||| || |||||| accucuUUACCCUGUCGCUCAUa 2 17 16 38 [hg19:14:24686295-24686317:-] 0.6713 123 6 -15.59 -0.1617 MIMAT0003248 hsa-miR-583 4738 NEDD8 cauuacccUGGAA-GGAGAAAc |::|| ||||||| gacccuccAUUUUACCUCUUUa 2 14 3 24 [hg19:14:24686309-24686330:-] 0.6502 148 7 -10.08 -0.8656 MIMAT0003280 hsa-miR-612 4738 NEDD8 uuCCUCGAGUCUUCGGGA-CGGGUCg ||| :|||| | :||| |||||| caGGA-UUCAGUAUUCCUGGCCCAGa 2 24 143 167 [hg19:14:24686166-24686190:-] 0.7201 141 6 -31.13 -0.3794 MIMAT0003280 hsa-miR-612 4738 NEDD8 uuccucgagucuucgggACGGGUCg ||||||| cugcccccuccccuggaUGCCCAGu 2 9 83 107 [hg19:14:24686226-24686250:-] 0.7062 140 7 -19.27 -0.8154 MIMAT0009203 hsa-miR-449b* 4738 NEDD8 ucaccgUCCCAUCAAC-ACCGAc |||| ||| ||||| gcccagAGGGCCCUUGCUGGCUa 2 17 161 183 [hg19:14:24686150-24686172:-] 0.7201 120 0 -14.98 -0.6441 MIMAT0003333 hsa-miR-549 4738 NEDD8 ucucGA-GUAGGUAUCAACAGu || ::||| |:|||||| augaCUGUGUCCCUGGUUGUCa 2 18 223 244 [hg19:14:24686089-24686110:-] 0.7201 144 6 -17.61 -0.2093 MIMAT0005798 hsa-miR-1185 4738 NEDD8 uuGUAUGUUUCCCAUAGGAGa ||| || | ||||||| ggCAU-CAUA---UAUCCUCu 2 20 43 59 [hg19:14:24686274-24686290:-] 0.6923 141 7 -13.40 -0.8542 MIMAT0003887 hsa-miR-769-3p 4738 NEDD8 uuggUUCUGGGGCCUCUAGGGUc :||||: :| :||||||| guggGAGACUGUGAGGAUCCCAg 2 20 123 145 [hg19:14:24686188-24686210:-] 0.7201 163 7 -29.00 -0.4616 MIMAT0004910 hsa-miR-450b-3p 4738 NEDD8 auACCUAC--GUUUUACUAGGGUu |||: | :: :| ||||||| ggUGGGAGACUGUGAGGAUCCCAg 2 21 122 145 [hg19:14:24686188-24686211:-] 0.7201 147 7 -19.51 -0.4616 MIMAT0004949 hsa-miR-877 4738 NEDD8 gggacgcgGUAGAGGAGAug :|| |||||| aggcaucaUAUAUCCUCUca 3 13 42 61 [hg19:14:24686272-24686291:-] 0.6923 128 0 -17.62 -0.1412 MIMAT0004952 hsa-miR-665 4738 NEDD8 uccccGGAGUCGGAGGACCa ||| :||||||||| uauuuCCU-GGCCUCCUGGa 2 16 251 269 [hg19:14:24686064-24686082:-] 0.7201 157 7 -25.75 -0.7267 MIMAT0004952 hsa-miR-665 4738 NEDD8 uccccggagucGGAGGACCa ::|||||| ucaauaaaauaUUUCCUGGc 2 10 242 261 [hg19:14:24686072-24686091:-] 0.7201 125 6 -13.20 -0.1718 MIMAT0004979 hsa-miR-936 4738 NEDD8 gacgcuaaggagggAGAUGACa ||||||| cccaguaauguaugUCUACUGg 2 9 102 123 [hg19:14:24686210-24686231:-] 0.7062 140 7 -10.72 -0.4635 MIMAT0005876 hsa-miR-1285 4738 NEDD8 uccaGAGUGAAACAACGGGUCu ||| | | | ||||||| ccccCUCCCCUGGAUGCCCAGu 2 19 86 107 [hg19:14:24686226-24686247:-] 0.7062 158 7 -18.05 -0.8010 MIMAT0005910 hsa-miR-1259 4738 NEDD8 uuuucgAUUCAGUAGUAUAUa |:|| ||||||||| ucauaaUGAGGCAUCAUAUAu 2 16 34 54 [hg19:14:24686279-24686299:-] 0.6923 163 7 -15.11 -0.8503 MIMAT0005911 hsa-miR-1260 4738 NEDD8 accACCG-UCUCCACCCUa || | | ||||||| guaUGUCUACUGGUGGGAg 2 16 111 129 [hg19:14:24686204-24686222:-] 0.7201 142 7 -13.60 -0.7416 MIMAT0005922 hsa-miR-1268 4738 NEDD8 gggGGUGGUGGUG-CGGGc |||: :|||| |||| acaCCAUAGCCACUGCCCc 2 16 71 89 [hg19:14:24686244-24686262:-] 0.6923 123 0 -21.70 -0.4228 MIMAT0005925 hsa-miR-1272 4738 NEDD8 aaagucuuaaacgacgguaGUAGUAg |||||| ccugucgcucauaaugaggCAUCAUa 2 8 26 51 [hg19:14:24686282-24686307:-] 0.6713 120 6 -16.65 -0.1214 MIMAT0005926 hsa-miR-1273 4738 NEDD8 uucuuucucaGAACGAAACAGCGGg :|| | ||||||: auuuuaccucUUUACCCUGUCGCUc 2 16 11 35 [hg19:14:24686298-24686322:-] 0.6713 131 0 -14.95 -0.1424 MIMAT0005942 hsa-miR-1288 4738 NEDD8 agaggucUAGUC--CCGUCAGGu :|:|| ||||||| acuggguGUUAGUUUGCAGUCCu 2 15 183 205 [hg19:14:24686128-24686150:-] 0.7201 141 7 -19.35 -1.1264 MIMAT0005953 hsa-miR-1322 4738 NEDD8 gucGUAGU-CGUCGUAGUAg ||| | | :||||||| gcuCAUAAUGAGGCAUCAUa 2 17 32 51 [hg19:14:24686282-24686301:-] 0.6923 151 7 -13.57 -1.1064 MIMAT0007887 hsa-miR-1912 4738 NEDD8 aaguGUGACGUACGA-GACCCAu | :||| ||| |||||| gggcCCUUGCUGGCUACUGGGUg 2 19 168 190 [hg19:14:24686143-24686165:-] 0.7201 126 6 -22.33 -0.5350 MIMAT0014989 hsa-miR-3126-5p 4738 NEDD8 acGAAGACCGUAGACAGGGAgu ||| || | | ||||||| cuCUUAUGAC-UGUGUCCCUgg 3 21 218 238 [hg19:14:24686095-24686115:-] 0.7201 142 0 -16.66 -0.1053 MIMAT0014995 hsa-miR-3130-5p 4738 NEDD8 ccGACGUGGCCUCUGACCCAu || ::|:|| ||||||| ccCU-UGCUGGCUACUGGGUg 2 20 171 190 [hg19:14:24686143-24686162:-] 0.7201 153 7 -21.15 -0.4363 MIMAT0015028 hsa-miR-3154 4738 NEDD8 agACGAGGGUUGAGGGGA-AGAc | || : :||:|||| ||| agUCCUGUGUGCUUCCCUCUCUu 2 21 200 222 [hg19:14:24686111-24686133:-] 0.7201 120 0 -18.10 -0.9981 MIMAT0015041 hsa-miR-1260b 4738 NEDD8 uaccACCG-UCACCACCCUa || | | |||||||| uguaUGUCUACUGGUGGGAg 2 16 110 129 [hg19:14:24686204-24686223:-] 0.7201 150 7 -15.03 -0.7416 MIMAT0015044 hsa-miR-3169 4738 NEDD8 gauaCACGGUU-CGUGUCAGGAu |||::|: ::||||||| cuggGUGUUAGUUUGCAGUCCUg 2 19 184 206 [hg19:14:24686127-24686149:-] 0.7201 153 7 -23.52 -0.6988 MIMAT0015048 hsa-miR-3173 4738 NEDD8 accGGACGGAU-AAAGGAG-GAAa ||||: |: || |||| ||| aguCCUGUGUGCUUCCCUCUCUUa 2 20 200 223 [hg19:14:24686110-24686133:-] 0.7201 126 0 -18.35 -1.0274 MIMAT0015088 hsa-miR-514b-3p 4738 NEDD8 aggugagugucuccACAGUUa |||||| acugugucccugguUGUCAAu 2 8 226 246 [hg19:14:24686087-24686107:-] 0.7201 120 6 -12.25 -0.1200 MIMAT0016900 hsa-miR-4270 4738 NEDD8 cgggaggggacugAGGGACu |||||| ucuuaugacugugUCCCUGg 2 8 219 238 [hg19:14:24686095-24686114:-] 0.7201 120 6 -19.74 -0.1311 MIMAT0000084 hsa-miR-27a 4738 NEDD8 cgccuugAAUCGGUGACACUu | :| ||||||| cuacuggUGGGAGACUGUGAg 2 15 117 137 [hg19:14:24686196-24686216:-] 0.7201 142 7 -16.89 -0.4164 MIMAT0000255 hsa-miR-34a 4738 NEDD8 uguugGUCGAUUCUGUGACGGu || | || ||||||| ugggaCACCAUAGCCACUGCCc 2 18 67 88 [hg19:14:24686245-24686266:-] 0.6923 153 7 -18.68 -0.3312 MIMAT0000318 hsa-miR-200b 4738 NEDD8 aguaguaAUGGUCC---GUCAUAAu | ||||| ||||||| gugaggaUCCCAGGAUUCAGUAUUc 2 16 133 157 [hg19:14:24686176-24686200:-] 0.7201 150 7 -14.97 -0.4100 MIMAT0000419 hsa-miR-27b 4738 NEDD8 cgucuugAAUCGGUGACACUu | :| ||||||| cuacuggUGGGAGACUGUGAg 2 15 117 137 [hg19:14:24686196-24686216:-] 0.7201 142 7 -15.29 -0.4164 MIMAT0000617 hsa-miR-200c 4738 NEDD8 agguaguaAUGGGCC---GUCAUAAu | || || ||||||| ugugaggaUCCCAGGAUUCAGUAUUc 2 16 132 157 [hg19:14:24686176-24686201:-] 0.7201 142 7 -13.88 -0.4100 MIMAT0000686 hsa-miR-34c-5p 4738 NEDD8 cguuaGUCG-AUUGAUGUGACGGa || | ||:| ||||||| ugggaCACCAUAGC--CACUGCCc 2 19 67 88 [hg19:14:24686245-24686266:-] 0.6923 146 7 -15.13 -0.3132 MIMAT0004693 hsa-miR-330-5p 4738 NEDD8 cggauucuguGUCCGGGUCUCu | ||||||||| uucaguauucCUGGCCCAGAGg 2 13 148 169 [hg19:14:24686164-24686185:-] 0.7201 152 7 -22.78 -0.1404 MIMAT0000756 hsa-miR-326 4738 NEDD8 gaccuccuucCCGGGUCUCc ||||||||| caguauuccuGGCCCAGAGg 2 11 150 169 [hg19:14:24686164-24686183:-] 0.7201 150 7 -23.46 -0.1418 MIMAT0001536 hsa-miR-429 4738 NEDD8 ugccaaaAUGGUCU---GUCAUAAu | ||||: ||||||| gugaggaUCCCAGGAUUCAGUAUUc 2 16 133 157 [hg19:14:24686176-24686200:-] 0.7201 146 7 -14.51 -0.4131 MIMAT0001541 hsa-miR-449a 4738 NEDD8 uggucgauUGUUAU--GUGACGGu || ||| ||||||| ucugggacACCAUAGCCACUGCCc 2 15 65 88 [hg19:14:24686245-24686268:-] 0.6923 149 7 -15.92 -0.3312 MIMAT0003327 hsa-miR-449b 4738 NEDD8 cggucgauUGUUAU--GUGACGGa || ||| ||||||| ucugggacACCAUAGCCACUGCCc 2 15 65 88 [hg19:14:24686245-24686268:-] 0.6923 149 7 -16.34 -0.3312 MIMAT0003329 hsa-miR-411 4738 NEDD8 gcaugcgAUAUGCCAGAUGAu |:||: ||||||| ccaguaaUGUAU-GUCUACUg 2 15 103 122 [hg19:14:24686211-24686230:-] 0.7062 148 7 -17.18 -0.5879

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G003413 MO000029892 NEDD8 Homo sapiens 4738

DNA & RNA Element - TargetScan Gene Name UTR Region Start UTR Region End AIR Total Normalized 3P-seq-tags & Pseudocounts Strand hg19_chromosome Genome Start Genome End NEDD8 1 216 100 29.867 - chr14 24686116 24686332 NEDD8 217 234 74.815 29.867 - chr14 24686098 24686116 NEDD8 235 235 66.957 29.867 - chr14 24686097 24686098 NEDD8 236 275 64.459 29.867 - chr14 24686057 24686097 NEDD8 276 286 32.417 29.867 - chr14 24686046 24686057 NEDD8 287 321 21.378 29.867 - chr14 24686011 24686046 NEDD8 322 322 0.033 29.867 - chr14 24686010 24686011

DNA & RNA Element - RepTar Gene Name miRNA Begin End Profile NEDD8 hsa-miR-3130-5p beg:173 end:191 pic:3' CCGACGTGGCCTCTGACCCAT 5'& .|.|| |||||||. &5' ------GCTGGCTACTGGGTG 3' NEDD8 hsa-miR-27a beg:119 end:137 pic:3' CGCCTTGAATCGGTGACACTT 5'& || .| |||||||. &5' --GGTG---GGAGACTGTGAG 3' NEDD8 hsa-miR-449a beg:70 end:88 pic:3' TGGTCGATTGTTATGTGACGGT 5'& |||| ||.| ||||||| &5' ACCA--TAGC----CACTGCC- 3' NEDD8 hsa-miR-449b beg:71 end:88 pic:3' CGGTCGATTGTTATGTGACGGA 5'& ||| ||.| ||||||| &5' -CCA--TAGC----CACTGCC- 3' NEDD8 hsa-miR-200b beg:139 end:157 pic:3' AGTAGTAATGGTCC---GTCATAAT 5'& ||||| ||||||| &5' ---------CCAGGATTCAGTATT- 3' NEDD8 hsa-miR-429 beg:139 end:157 pic:3' TGCCAAAATGGTCT---GTCATAAT 5'& ||||. ||||||| &5' ---------CCAGGATTCAGTATT- 3' NEDD8 hsa-miR-326 beg:157 end:170 pic:3' GACCTCCTTCCCGGGTCTCC 5'& |||||||||| &5' ----------GGCCCAGAGG 3' NEDD8 hsa-miR-330-5p beg:157 end:170 pic:3' CGGATTCTGTGTCCGGGTCTCT 5'& |||||||||. &5' ------------GGCCCAGAGG 3' NEDD8 hsv1-miR-H16 beg:252 end:269 pic:3' CGGAAGCTAGGGTCGGAGGACC 5'& ||| ||||||||| &5' --------TCCTGGCCTCCTGG 3' NEDD8 hsa-miR-665 beg:253 end:269 pic:3' TCCCCGGAGTCGGAGGACCA 5'& ||| .||||||||| &5' -----CCT-GGCCTCCTGG- 3' NEDD8 hsa-miR-486-3p beg:71 end:90 pic:3' TAGGACATGACTCGACGGGGC 5'& || .| ||||||| &5' --CCATAGCCA--CTGCCCC- 3' NEDD8 ebv-miR-BART5star beg:147 end:166 pic:3' TCCACTTGTCG------CCGGGTG 5'& |||. |||||| &5' -------CAGTATTCCTGGCCCA- 3' NEDD8 hsa-miR-1288 beg:187 end:205 pic:3' AGAGGTCTAGTCC--CGTCAGGT 5'& .|.|| ||||||| &5' -------GTTAGTTTGCAGTCC- 3' NEDD8 hsa-miR-411 beg:103 end:123 pic:3' GCATGCGATATGCCAGATGAT 5'& ||| |.||. |||||||. &5' -GTAA--TGTAT-GTCTACTG 3' NEDD8 hsa-miR-532-3p beg:112 end:130 pic:3' ACGTTCGGAACCCACACCCTCC 5'& |.|| ||||||| &5' -----GTCTACTG-GTGGGAG- 3' NEDD8 hcmv-miR-US33-3p beg:120 end:137 pic:3' ACCTACACGAGCCTGGCACT 5'& ||| |||.|||| &5' -----GTGGGA-GACTGTGA 3' NEDD8 hcmv-miR-US5-2 beg:40 end:62 pic:3' CTGTAGCAGTGT-GGATAGTATT 5'& |.|||| .|.| ||| ||| &5' GGCATCA-TATATCCTCTCA--- 3' NEDD8 hsa-let-7a beg:6 end:21 pic:3' TTGATATGTTGGAT-GATGGAGT 5'& || .|||||| &5' ----------CCATTTTACCTC- 3' NEDD8 hsa-let-7d beg:0 end:22 pic:3' TTGATACGTTGGAT----GATGGAGA 5'& || | ||| .||||||| &5' -----TGGACCCTCCATTTTACCTCT 3' NEDD8 hsa-miR-1185 beg:40 end:60 pic:3' TTGTATGTTTCCCATAGGAGA 5'& ..||| || |||||||| &5' GGCAT-CATA---TATCCTCT 3' NEDD8 hsa-miR-1225-5p beg:86 end:106 pic:3' GGGGGGTGACCCGGCATGGGTG 5'& ||.||| |||| |.|||| &5' CCTCCC-CTGGA---TGCCCA- 3' NEDD8 hsa-miR-1228star beg:72 end:95 pic:3' GTGTGTG-GACGGGGGCGGGTG 5'& ||.| | |||||||| ||| &5' CATAGCCACTGCCCCCTCCC-- 3' NEDD8 hsa-miR-1243 beg:137 end:154 pic:3' GTGAGGATATTAACTAGGTCAA 5'& ||| |||.|||| &5' ---TCCCAG----GATTCAGT- 3' NEDD8 hsa-miR-1246 beg:253 end:274 pic:3' GGAC--GAGGTTTTTAGGTAA 5'& |||| |||| .||||. &5' CCTGGCCTCCTGGAATCT--- 3' NEDD8 hsa-miR-1260 beg:119 end:141 pic:3' ACCACCGTCTC-CAC-CCTA 5'& ||||| ||| ||| |||| &5' -GGTGGGAGACTGTGAGGAT 3' NEDD8 hsa-miR-1276 beg:4 end:25 pic:3' ACAGAGGTGTCCC-GAGAAAT 5'& |||||. ||||||| &5' ---CTCCATTTTACCTCTTTA 3' NEDD8 hsa-miR-128 beg:116 end:137 pic:3' TTTCTCTGGCCAAG---TGACACT 5'& ||.||| ||||||| &5' ------ACTGGTGGGAGACTGTGA 3' NEDD8 hsa-miR-1285 beg:87 end:107 pic:3' TCCAGAGTGAAACA-ACGGGTCT 5'& ||| | || ||||||| &5' ----CTC-CCCTGGATGCCCAG- 3' NEDD8 hsa-miR-1289 beg:141 end:166 pic:3' TTTTACGTC-TAAGGACCTGAGGT 5'& |..|| ||| |||||||| | ||| &5' AGGATTCAGTATTCCTGG-C-CCA 3' NEDD8 hsa-miR-1322 beg:29 end:51 pic:3' GTCGTAGTCG----TCGTAGTAG 5'& || ||| .||||||| &5' --GC-TCATAATGAGGCATCAT- 3' NEDD8 hsa-miR-193a-5p beg:155 end:174 pic:3' AGTAGAGCGGGCGTTTCTGGGT 5'& || |||| .|.|.||| &5' ----CTGGCCCA-GAGGGCCC- 3' NEDD8 hsa-miR-1979 beg:112 end:130 pic:3' ATCAGTTCACTTCGTCACCCTC 5'& ||| .||||||| &5' --GTCTACT-----GGTGGGAG 3' NEDD8 hsa-miR-199a-3p beg:166 end:187 pic:3' ATTGGTTACACGTCTGATGACA 5'& ..|| ||| |.|||||| &5' -GGCCCT--TGCTGGCTACTG- 3' NEDD8 hsa-miR-199b-3p beg:166 end:187 pic:3' ATTGGTTACACGTCTGATGACA 5'& ..|| ||| |.|||||| &5' -GGCCCT--TGCTGGCTACTG- 3' NEDD8 hsa-miR-202 beg:201 end:220 pic:3' AAGGGTACGGGATATGGAGA 5'& |||..||. || ||||| &5' -TCCTGTGTGCTTC-CCTCT 3' NEDD8 hsa-miR-203 beg:0 end:18 pic:3' GATCACCA-GGATTTGTAAAGTG 5'& ||| ||| |||||.|| &5' ----TGGACCCTC--CATTTTAC 3' NEDD8 hsa-miR-205star beg:255 end:273 pic:3' CTTGAAGTGAGGTGACTTTAG 5'& | .| | |||.|||| &5' -----TGGC-CTCCTGGAATC 3' NEDD8 hsa-miR-220c beg:190 end:210 pic:3' TCAGAAGTGTTGTCGGGACACA 5'& |||.| .|||.||||||| &5' AGTTT-----GCAGTCCTGTGT 3' NEDD8 hsa-miR-222star beg:170 end:189 pic:3' TCCTAGATGTGACCGATGACTC 5'& || ..||||||||||.| &5' -----CT-TGCTGGCTACTGGG 3' NEDD8 hsa-miR-27b beg:116 end:137 pic:3' CGTCTTGAA---TCGGTGACACTT 5'& ||| .| |||||||. &5' -----ACTGGTGGGAGACTGTGAG 3' NEDD8 hsa-miR-29c beg:173 end:194 pic:3' ATTGGCTAAAGTTTACCACGAT 5'& .|.| | | ||||.|| &5' --GCTGGCTACTG--GGTGTTA 3' NEDD8 hsa-miR-3171 beg:39 end:56 pic:3' CTATATATGTCTAAGGTATGTAGA 5'& ||. .||||.||| &5' ---------AGGCATCATATATC- 3' NEDD8 hsa-miR-3180-3p beg:71 end:90 pic:3' CCGGAGGCCTTCGA-GGCGGGGT 5'& || ||| |.||||| &5' -----CCAT-AGCCACTGCCCC- 3' NEDD8 hsa-miR-34a beg:68 end:88 pic:3' TGTTGGTCGATTCTGTGACGGT 5'& || |||| || ||||||| &5' AC-ACCAT---AGCCACTGCC- 3' NEDD8 hsa-miR-34c-5p beg:69 end:88 pic:3' CGTTAGTCG-ATTGATGTGACGGA 5'& || ||.| ||||||| &5' -----CACCATAGC--CACTGCC- 3' NEDD8 hsa-miR-4253 beg:88 end:105 pic:3' TGGGGGACCTGTACGGGA 5'& .|||||||| ||||| &5' -TCCCCTGGA--TGCCC- 3' NEDD8 hsa-miR-4255 beg:210 end:230 pic:3' AGGTAGAGACTTGTGAC 5'& ||| ||||| | |||| &5' TCCCTCTCTTATGACTG 3' NEDD8 hsa-miR-4258 beg:118 end:128 pic:3' GGTTCCGCCACCGCCCC 5'& |||.||| &5' ---------TGGTGGG- 3' NEDD8 hsa-miR-4259 beg:153 end:180 pic:3' AGGACTGGGGA-TCTGGGT-TGAC 5'& |||||.||| .|.||| .||| &5' TCCTGGCCCAGAGGGCCCTTGCTG 3' NEDD8 hsa-miR-4266 beg:253 end:269 pic:3' CCGGTTCCGGAGGATC 5'& || ||||||||.| &5' --CCT-GGCCTCCTGG 3' NEDD8 hsa-miR-4320 beg:122 end:144 pic:3' TCCTTC-GATG-TCTTAGGG 5'& ||.|| ||.. ||.||||| &5' -GGGAGACTGTGAGGATCCC 3' NEDD8 hsa-miR-4328 beg:117 end:134 pic:3' TTAGGAC--CCTTTTGACC 5'& ||| ||.|.|||| &5' ----CTGGTGGGAGACTG- 3' NEDD8 hsa-miR-518fstar beg:205 end:220 pic:3' CTCTTTCACGAAGGGAGATCTC 5'& |||||||||||| &5' ------GTGCTTCCCTCT---- 3' NEDD8 hsa-miR-520a-5p beg:59 end:71 pic:3' TCTTTCATGAAGGGAGACCTC 5'& |.||||||. &5' -----------CTCTCTGGG- 3' NEDD8 hsa-miR-525-5p beg:59 end:71 pic:3' TCTTTCACGTAGGGAGACCTC 5'& |.||||||. &5' -----------CTCTCTGGG- 3' NEDD8 hsa-miR-549 beg:228 end:245 pic:3' TCTCGAGTAGGTATCAACAGT 5'& .||| |.||||||| &5' -------GTCCCTGGTTGTCA 3' NEDD8 hsa-miR-555 beg:15 end:29 pic:3' TAGTCTCCAAGTCGAATGGGA 5'& | .||||||| &5' ----------CTCTTTACCCT 3' NEDD8 hsa-miR-564 beg:212 end:234 pic:3' CGGAC-GACTG-TGGCACGGA 5'& ||| || |. ||.|||.| &5' -CCTCTCTTATGACTGTGTC- 3' NEDD8 hsa-miR-575 beg:167 end:183 pic:3' CGAGGACAGGTTGACCGAG 5'& || ||| .|||||| &5' GC-CCTT----GCTGGCT- 3' NEDD8 hsa-miR-582-5p beg:116 end:137 pic:3' TCATTGACCAACTTGTTGACATT 5'& ||||| ||.. .|||||.| &5' ----ACTGG-TGGGAGACTGTGA 3' NEDD8 hsa-miR-583 beg:0 end:24 pic:3' CATTACCCTGG-------AA-GGAGAAAC 5'& ||||| || ||||||| &5' ------GGACCCTCCATTTTACCTCTTT- 3' NEDD8 hsa-miR-600 beg:119 end:138 pic:3' CTCGTTCCGAGAACAGACATTCA 5'& ||. ||||.|| &5' ------GGTGGGAGACTGTGAG- 3' NEDD8 hsa-miR-621 beg:163 end:183 pic:3' TCCATTCGCGACAACGATCGG 5'& .|| || |||||.||. &5' ----GAGGGCCCTTGCTGGCT 3' NEDD8 hsa-miR-630 beg:86 end:109 pic:3' TGGAAGGGACC-ATGTCTTATGA 5'& ||| |||||| |.| |.|| &5' -CCTCCCCTGGATGCCCAGTA-- 3' NEDD8 hsa-miR-761 beg:185 end:212 pic:3' ACACAGTCAAA-GT-GGGACG-ACG 5'& ||||.||||| || .||||. ||| &5' -GTGTTAGTTTGCAGTCCTGTGTGC 3' NEDD8 hsa-miR-769-3p beg:124 end:146 pic:3' TTGGTTCTGGGGCCTCTAGGGTC 5'& .||||. .| |||||||| &5' ----GAGACTGTGAGGATCCCAG 3' NEDD8 hsa-miR-936 beg:103 end:123 pic:3' GACGCTAAGGAGGGAGATGACA 5'& | || . ||||||| &5' --GTAATGTA--TGTCTACTG- 3' NEDD8 kshv-miR-K12-12star beg:74 end:97 pic:3' AGTTGGTCCCGTGGGAGGGGGT 5'& .|.||| || ||||||||. &5' -TAGCCACTGCCCCCTCCCCT- 3' NEDD8 kshv-miR-K12-5star beg:160 end:186 pic:3' GGAATCCCGTGGTCC--CTGATGGA 5'& || ||||| || |.||||. &5' CCAGAGGGC-CCTTGCTGGCTACT- 3' NEDD8 sv40-miR-S1-5p beg:44 end:62 pic:3' TTCCGAGTAAAGTCCGGGGAGT 5'& |||| ||.|||| &5' -----TCATATAT--CCTCTCA 3'

DNA & RNA Element - miRNAMap Gene Name Mature miRNA Target Start Target End miRNA 3-5 Alignment Target 5-3 NEDD8 hsa-miR-200b 150 157 CAGUAGUAAU-----------------GGUCC---GUCAUAAU ||||| ||||||| GUCUACUGGUGGGAGACUGUGAGGAUCCCAGGAUUCAGUAUUC NEDD8 hsa-miR-27a 130 137 CGCCU-------------------UGAA---UCGGUGACACUU :||| ||| :| |||||||: CUGGAUGCCCAGUAAUGUAUGUCUACUGGUGGGAGACUGUGAGG NEDD8 hsa-miR-27b 130 137 ----------------CGU-CU--UGAA---UCGGUGACACUU |:| | ||| :| |||||||: CUGGAUGCCCAGUAAUGUAUGUCUACUGGUGGGAGACUGUGAGG NEDD8 hsa-miR-326 162 169 ----GAC-CUCCUUC------------------CCGGGUCUCC ||| ||||| |||||||||| GAGACUGUGAGGAUCCCAGGAUUCAGUAUUCCUGGCCCAGAGGG NEDD8 hsa-miR-34a 81 88 ------------------------UUGUUGGUCGAUUCUGUGACGGU :||| ||| || ||||||| AUCAUAUAUCCUCUCACUCUCUGGGACA-CCAU---AGCCACUGCCC NEDD8 hsa-miR-34c 81 88 ----------------------CGUUAGUCG-AUUGAUGUGACGGA | :| || ||:| ||||||| AUCAUAUAUCCUCUCACUCUCUGGGA-CACCAUAGC--CACUGCCC NEDD8 hsa-miR-411 115 122 G-------------------------CAUGCGAUAUGCCAGAUGAU ||| |:||: |||||||: CCACUGCCCCCUCCCCUGGAUGCCCAGUAA--UGUAU-GUCUACUGG NEDD8 hsa-miR-449 81 88 ---------------------------UGGUCGAUUGUUAUGUGACGGU |||| ||:| ||||||| AUCAUAUAUCCUCUCACUCUCUGGGACACCA--UAGC----CACUGCCC NEDD8 hsa-miR-449b 81 88 C---------------------------GGUCGAUUGUUAUGUGACGGA ||| ||:| ||||||| AUCAUAUAUCCUCUCACUCUCUGGGACACCA--UAGC----CACUGCCC NEDD8 hsa-miR-452* 127 134 GA----------------------AGAAA--CGUCUACUCUGACU ||| | | ||||||| CCCCUGGAUGCCCAGUAAUGUAUGUCUACUGGUGG--GAGACUGU NEDD8 hsa-miR-612 100 107 U--UCCU-------CGAGUCUUCGGG-----------ACGGGUCG :||| || || |||| |||||||: UCUGGGACACCAUAGC-CACU-GCCCCCUCCCCUGGAUGCCCAGUA NEDD8 hsa-miR-769-3p 138 145 UUGG--------------------UUCUGGGGCCUCUAGGGUC :||||: :| |||||||| CCAGUAAUGUAUGUCUACUGGUGGGAGACUGUGAGGAUCCCAGG NEDD8 hsa-let-7b 69 89 -UUG-GUGUGUUGGAUGAUGGAGU :|| | ||:|:|| |||:|| GGACAC-CAUAGCC-ACUGCCC-- NEDD8 hsa-let-7e 5 22 UGAUAUGUUGGAGG----AUGGAGU ||||| |||||| --------CCCUCCAUUUUACCUCU NEDD8 hsa-miR-101 190 210 GAAGUCAAUAGUGUCAUGACAU- |:||| |::|||| ||||: -GUUAGU--UUGCAGUCCUGUGU NEDD8 hsa-miR-10a 177 192 GUGUUUAAGCCUAGAUGUCCCAU- :|| |||| ||||: -------CUGG--CUACUGGGUGU NEDD8 hsa-miR-10b 177 192 UGUUUAAGCCAAGAUGUCCCAU- :|| |||| ||||: ------CUGG--CUACUGGGUGU NEDD8 hsa-miR-128a 118 138 UUUUCUCUGGCCAAG---UGACACU- ||:||| ||||||| ------UACUGGUGGGAGACUGUGAG NEDD8 hsa-miR-128b 118 138 CUUUCUCUGGCCAAG---UGACACU- ||:||| ||||||| ------UACUGGUGGGAGACUGUGAG NEDD8 hsa-miR-132 113 136 -GCUGGU-ACCGACAUCUGACAAU :| |:| |||: ||||||| AUGUCUACUGGUGGGAGACUGUG- NEDD8 hsa-miR-134 61 85 -GGGAGACCAGUUGGU--CAGUGU |:|||||| |||| | ||| ACUCUCUGGGACACCAUAGCCACU NEDD8 hsa-miR-146a 140 159 UUGGGUACCUUAAGUCAAGAGU |||| ||| |||||| :|| -UCCCA-GGA-UUCAGUAUUCC NEDD8 hsa-miR-149 121 148 -CCUCACUUCUGUG---CCUC-GGUCU- || | |:|||| ||| ||||: UGGUG-GGAGACUGUGAGGAUCCCAGGA NEDD8 hsa-miR-150 117 141 -GUGACCAUGUUCCCA-AC-CCUCU :||||||: :|| || ||| CUACUGGUGGGAGACUGUGAGGAU- NEDD8 hsa-miR-181b 91 118 -GGGUGGCU-----GUCGUUACUUACAA ||| |:|: |||:|||| |||| UCCC-CUGGAUGCCCAGUAAUGUAUGUC NEDD8 hsa-miR-181d 168 194 -UUGGG--UGGCUGUUGUUACUUACAA- ::||| :|:|:| || || |||| GGGCCCUUGCUGGCUAC--UGGGUGUUA NEDD8 hsa-miR-193a 183 204 -GACCCUGAAACAUCCGGUCAA ||||| || || | |||| ACUGGGUGUUAGUUUG-CAGUC NEDD8 hsa-miR-195 148 185 CGGUUAUAAAGAC--------------ACGAC-GAU- :||:|||| ||| ||||| ||| UUCAGUAUUCCUGGCCCAGAGGGCCCUUGCUGGCUAC NEDD8 hsa-miR-198 56 77 GGAUAGAG-GGGAGACC---UGG- |||| |:|||||| ||| ---CUCUCACUCUCUGGGACACCA NEDD8 hsa-miR-199a* 168 188 -UUGGUUACACGUCUGAUGACAU ::|| ||| |:|||||| GGGCCCU--UGCUGGCUACUGG- NEDD8 hsa-miR-214 208 244 GACGG-----------ACAGACACGGA---CGACA- |||: || |||||:| |:||| GUGCUUCCCUCUCUUAUGACUGUGUCCCUGGUUGUC NEDD8 hsa-miR-296 142 176 UGUCCUAACUC-------CCC-----CCCGGGA- ||||||| || || ||||||| CCAGGAUUCAGUAUUCCUGGCCCAGAGGGCCCUU NEDD8 hsa-miR-324-5p 70 104 -UGUGGUU------ACGGGAUCC----CCUACGC |||||| ||||| |||||| GACACCAUAGCCACUGCCCCCUCCCCUGGAUGCC NEDD8 hsa-miR-325 169 190 -UGUGAAUGACCUGUGGAUGAUCC- :| |||:|||| |||||:|| GGCCCUUGCUGG----CUACUGGGU NEDD8 hsa-miR-326 130 171 -GAC-CUCCU----UC--------------CCGGGUCUCC ||| ||||| || |||||||||| ACUGUGAGGAUCCCAGGAUUCAGUAUUCCUGGCCCAGAGGG NEDD8 hsa-miR-328 144 174 UGCCU---UC-------CCGUCUCUCCCGGUC ||| || ||| |||||||| -AGGAUUCAGUAUUCCUGGCCCAGAGGGCCC- NEDD8 hsa-miR-330 194 215 AGAGACGUCCGG-CACACGAAACG |:||||| || |||||||| -GUUUGCAGUCCUGUGUGCUUC-- NEDD8 hsa-miR-331 139 173 AAGA-UCCUAU----------CCGGGUC-CCCG- || ||||| ||||||| |||| AUCCCAGGAUUCAGUAUUCCUGGCCCAGAGGGCC NEDD8 hsa-miR-342 118 140 CUGCCCACGCUAAAGACACACUCU- || |||| || ||||||: UACUGGUGGGAGAC---UGUGAGGA NEDD8 hsa-miR-345 169 197 -CGGG----ACC--UGAUCCUCAGUCGU |||| ||| |||:|| ||:||: GGCCCUUGCUGGCUACUGGGUGUUAGUU NEDD8 hsa-miR-34a 60 84 UUGUUGGUCGAUUCUGUGA---CGGU- ||: ||::||||| |||| ---CACUCUCUGGGACACCAUAGCCAC NEDD8 hsa-miR-362 129 151 UGAGUGUGGAUCCAAGGUUCCUAA- || : ||| ||| |||||| ---GACUGUGAGGAUCCCAGGAUUC NEDD8 hsa-miR-370 141 173 -GGUCC--------AAGGUG-GGGUCGUCCG- ||||| |||| ||||| :||| CCCAGGAUUCAGUAUUCCUGGCCCAGAGGGCC NEDD8 hsa-miR-411 105 124 GCAUGCGAUAUGCCAGAUGAU- ||| |:||: |||||||: AGUAA--UGUAU-GUCUACUGG NEDD8 hsa-miR-425-3p 121 163 -CCGCCU---------------GUGCUG-----UAAGGGCUA ||:||: || ||: |||||:|: UGGUGGGAGACUGUGAGGAUCCCAGGAUUCAGUAUUCCUGGC NEDD8 hsa-miR-452* 115 135 GAAGAA-ACGUCUACUCUGACU ||| || |: ||||||| -GUCUACUGGUGG-GAGACUGU NEDD8 hsa-miR-484 119 141 UAGCCCUCCC-CUGACUCGGACU- | || ||| ||||| | || -ACUGGUGGGAGACUGUGAG-GAU NEDD8 hsa-miR-489 99 123 CGACGG--CAUAUACACUACAG-UGA- |||| ||| |||| ||||| ||| -AUGCCCAGUA-AUGU-AUGUCUACUG NEDD8 hsa-miR-493-3p 157 177 -GACCGUGUGUCAUCUGGAAGU ||||| | ||| :|:|| |: CCUGGC-C-CAGAGGGCCCUUG NEDD8 hsa-miR-512-5p 164 192 CUUUCACGGGAGUU-CCGA---CUCAC- |:|| |||||: |||| |:||| CAGAGGGCCCUUGCUGGCUACUGGGUGU NEDD8 hsa-miR-515-3p 30 49 UGCGAGGUUUUCUUCCGUGAG ||||| || :|||||: UCGCUCAU-AAUGAGGCAUC- NEDD8 hsa-miR-518f* 207 221 UCUCUUUCACGAAGGGAGAUCUC |||||||||||| ------UGUGCUUCCCUCUC--- NEDD8 hsa-miR-522 59 79 UUGUGAGAUUUCCCU-UGGUAAAA |||||| |||| ||||| -UCACUCUCU-GGGACACCAUA-- NEDD8 hsa-miR-526a 207 221 UCUUUCACGAAGGGAGAUCUC |||||||||||| ----UGUGCUUCCCUCUC--- NEDD8 hsa-miR-532 25 49 UGCCAGGAU-GUGAGU-----UCCGUAC |||: |:|||| |||||| ----CCCUGUCGCUCAUAAUGAGGCAUC NEDD8 hsa-miR-542-5p 119 149 -GAGCACU-----GUACUACUAGGGG-CU- || |||: ::||| |||||| || ACUGGUGGGAGACUGUGAGGAUCCCAGGAU NEDD8 hsa-miR-549 224 246 UCUCGA-GUAGGUAUCAACAGU- || || ::||| |:||||||| UGA-CUGUGUCCCUGGUUGUCAA NEDD8 hsa-miR-555 131 166 UAGUCUCC---------AAGUCGAA-----UGGGA | |||| |||||: :||| CUGUGAGGAUCCCAGGAUUCAGUAUUCCUGGCCCA NEDD8 hsa-miR-565 68 89 UUUGUCUGUAGCGCUCGGU--CGG- :|||| | ||||| ||| ---GGGACACCAU-AGCCACUGCCC NEDD8 hsa-miR-566 133 166 CAAC-CCUAGUGUCCG-------------CGGG- || ||||| |||| |||| -GUGAGGAUCCCAGGAUUCAGUAUUCCUGGCCCA NEDD8 hsa-miR-575 154 184 CGAGGACA-GGU----------UGACCGAG :||||| ||| :|||||| AUUCCUGGCCCAGAGGGCCCUUGCUGGCUA NEDD8 hsa-miR-582 104 138 -UCAU----------UGACCAACUUGUUGACAUU- |||| ||||| ||:: :|||||:| CAGUAAUGUAUGUCUACUGG-UGGGAGACUGUGAG NEDD8 hsa-miR-584 57 81 -GAGUCAGGGUCCGUUUGGUAUU- |||| ||:| || | ||||||: UCUCACUCUCUGGGACACCAUAGC NEDD8 hsa-miR-593 167 194 CGACUCGUU-ACGGACCGA----CCACGGA |:|| || |||||| ||||:: --AGGGCCCUUG-CUGGCUACUGGGUGUUA NEDD8 hsa-miR-596 161 184 -GGG-CUCCUCGGCC-CGUCCGAA ||| |||| ||| || |||| GCCCAGAGG-GCCCUUGCUGGCUA NEDD8 hsa-miR-602 167 194 -CCCGGCGUCGACAGCGGG--CACAG- ||||| |||| | |: ||||: AGGGCCCUUGCUGGCUACUGGGUGUUA NEDD8 hsa-miR-611 157 179 CAGUCUGGGGCUCCCCAGGAGCG- | |:||| ||||| |||:|| -CCUGGCCCAGAGGGC-CCUUGCU NEDD8 hsa-miR-612 143 179 UUCCUCGAGUCU------UCGGGA----CGGGU-CG- |||| :|||| :|||| |||| || CAGGA-UUCAGUAUUCCUGGCCCAGAGGGCCCUUGCU NEDD8 hsa-miR-614 172 194 -GGUGGACCGUUCUUG-UCCGCAAG |: ||||| || :||:||| CCUUGCUGGCU---ACUGGGUGUUA NEDD8 hsa-miR-621 159 184 UCCA---UUCGCGACAACGAUCGG- || :|| || |||||:||: UGGCCCAGAGGGCCCUUGCUGGCUA NEDD8 hsa-miR-624 163 188 ACUUGUGUUCC----AUGACC-AUGAU- || |:|| |:|||| ||||: ---CCAGAGGGCCCUUGCUGGCUACUGG NEDD8 hsa-miR-625 67 93 -UCCUGA--UAUCU-UGAAAGGGGGA- :|||| |||| ||| |||||| UGGGACACCAUAGCCACUG-CCCCCUC NEDD8 hsa-miR-629 94 132 CGACC--CGA--------AUGCA-------ACCCUCUUG |||| || ||:|| ||||||| CCUGGAUGCCCAGUAAUGUAUGUCUACUGGUGGGAGAC- NEDD8 hsa-miR-634 162 182 CAGGUUUCAACCCC---ACGACCAA |||:| ||| |||||| -CCCAGA---GGGCCCUUGCUGGC- NEDD8 hsa-miR-637 151 177 UGCGUC----UCGGG-CUUUCGGGGGUCA |:| :|||| ||::||||:: -AGUAUUCCUGGCCCAGAGGGCCCUUG-- NEDD8 hsa-miR-642 142 174 -GUUCUGUGUAA-----ACC---UCUCCCUG- ||:||: || ||| |||||| | CCAGGAUUCAGUAUUCCUGGCCCAGAGGGCCC NEDD8 hsa-miR-645 148 169 -AGUCGUCAUGGUCGGAUCU- ||||:| |::||| ||| UUCAGUAUUCCUGGCCCAGAG NEDD8 hsa-miR-647 165 205 -CUUCC---------------UUCAC--UCA--CGUCGGUG ||:|| ::||| ||| ||||:| AGAGGGCCCUUGCUGGCUACUGGGUGUUAGUUUGCAGUCC- NEDD8 hsa-miR-650 200 221 -CAGGACUCUCGCGAC-GGAGGA |||||| |:||| ||||: AGUCCUGU--GUGCUUCCCUCUC NEDD8 hsa-miR-658 72 97 -UGGUUGCCUGGAUGAA--GGGAGGCGG- |||| :|| ||| |||||| || CACCAUA--GCC-ACUGCCCCCUCC-CCU NEDD8 hsa-miR-663 197 219 -CGCCAGGGCGCCGCGGGGCGGA- || ||||:|:| :||::| ||| UGCAGUCCUGUG-UGCUUC-CCUC NEDD8 hsa-miR-671 72 105 -UGGA---GGU--C-GGGGAGGUC-CCGAAGGA ||| ||| | ||||||| || || CACCAUAGCCACUGCCCCCUCCCCUGGAUGCCC NEDD8 hsa-miR-765 44 67 -GUAGUGGA-AGGAAGAG-GAGGU |||||: |||| ||| |||: GCAUCAUAUAUCCU-CUCACUCUC NEDD8 hsa-miR-769-3p 126 147 UUGGUUCUGGGGCCUCUAGGGUC- :||||: :| :|||||||| ---GGAGACUGUGAGGAUCCCAGG NEDD8 hsa-miR-770-5p 168 190 ACCGGGACUGUGCACCAUGACCU- |||||| :| | ||||||: GGGCCCUUGCUGGC--UACUGGGU NEDD8 hsa-miR-99a 163 191 -GUGUUCU---AGCCUA-GAUG-CCCAA || |:|: |:| |||| |||| CCAGAGGGCCCUUGCUGGCUACUGGGUG NEDD8 hsa-miR-99b 105 127 GCGUUCCAGCCAAGAUGCCCAC- |:|| || | ||||| |||| AGUAAUGUAUG-UCUACUGGUGG NEDD8 hsa-let-7b 70 90 uUGGUGUGUUGGAUGAUGGAGu || ||:|:|| |||:|| | gACACCATAGCC-ACTGCCCCc NEDD8 hsa-let-7c 72 90 uUGGUAUGUUGGAUGAUGGAGu ||||| |:|| |||:|| | cACCAT--AGCC-ACTGCCCCc NEDD8 hsa-let-7e 1 21 ugauAUGUUGGAG----GAUGGAGu |: | |||| :|||||| ----TGGACCCTCCATTTTACCTCt NEDD8 hsa-miR-101 185 208 gaaguCAAU--AGUGUCAUGACAu |||| |::|||| |||| tgggtGTTAGTTTGCAGTCCTGTg NEDD8 hsa-miR-10a 169 190 guguuuAAGCCUAGAUGUCCCAu | | |: |||| |||| ggccctTGCTGG-CTACTGGGTg NEDD8 hsa-miR-10b 171 190 uguuuaagCCAAGAUGUCCCAu || |||| |||| cccttgctGG--CTACTGGGTg NEDD8 hsa-miR-128a 115 136 uuuucucuggccaagUGACACU ||||||| gtctactggtgggagACTGTGA NEDD8 hsa-miR-128b 115 136 cuuucucuggccaagUGACACU ||||||| gtctactggtgggagACTGTGA NEDD8 hsa-miR-132 114 136 gCUGGU-ACCGACAUCUGACAau | |:| |||: | ||||||| tGTCTACTGGTGGGAGACTGTga NEDD8 hsa-miR-134 62 84 GGGAGA-CCAGUUG-GUCAGUGu |:|||| || || | :|| ||| CTCTCTGGGACACCATAGCCACt NEDD8 hsa-miR-146a 139 158 UUGGGUACCUUAAGUCAAGAGu | |||| |:||||||| :|| ATCCCA--GGATTCAGTATTCc NEDD8 hsa-miR-149 126 153 CCU----CACUUCU-GUG-CCUCGGUCu ||| ||||:|| | | ||| :||| GGAGACTGTGAGGATCCCAGGATTCAGt NEDD8 hsa-miR-150 109 130 gugaccauguucccaACCCUCU ||||||| atgtatgtctactggTGGGAGA NEDD8 hsa-miR-181b 88 117 GGGUGG----CU----GUCGUUACUUACAa ||| || || |||:|||| |||| CCCTCCCCTGGATGCCCAGTAATGTATGTc NEDD8 hsa-miR-181d 169 192 uuGGG--UGGCUGUUGUUACUUACAA ||| :|:|:| || ||::|||| ggCCCTTGCTGGCTAC--TGGGTGTT NEDD8 hsa-miR-193a 184 208 GACCC----UGAAACAUCCGGUCAa ||||| | |||| || || || CTGGGTGTTAGTTTGCAGTCCTGTg NEDD8 hsa-miR-198 55 73 GGAUAGAG-GGGAGA-CCUGg || |||| |:|||| |||| CC--TCTCACTCTCTGGGACa NEDD8 hsa-miR-199a* 161 188 uuGGUUAC------ACGUCUGAUGACau |||: | ||| |:|||||| gcCCAGAGGGCCCTTGCTGGCTACTGgg NEDD8 hsa-miR-200b 133 157 CAGUAGUAAUGGUCC---GUCAUAAu || | | | ||||| ||||||| GTGAGGA-TCCCAGGATTCAGTATTc NEDD8 hsa-miR-214 223 242 gACGGACAGACACGGA-CGACA || ||| ||| ||| |:||| aTGACTG--TGTCCCTGGTTGT NEDD8 hsa-miR-27a 123 137 CGCCUUGAAUCGGUGACACUu |:||: || ||||||| GTGGG----AG--ACTGTGAg NEDD8 hsa-miR-27b 117 137 cgucuugAAUCGGUGACACUu | :| ||||||| ctactggTGGGAGACTGTGAg NEDD8 hsa-miR-324-5p 84 103 uguGGUUACGGGAUCCCCUACGc || | |||| |||||| tgcCCCCTCCCCT---GGATGCc NEDD8 hsa-miR-325 170 188 uGUGAAUGACCUGUGGAUGAUCC | |||:|||| |||||:|| gCCCTTGCTGG----CTACTGGG NEDD8 hsa-miR-326 150 169 gaccuccuucCCGGGUCUCC |||||||||| cagtattcctGGCCCAGAGG NEDD8 hsa-miR-326 120 148 GACCUCCUUC-------CC--GGGUCucc |||| ||:|| || ||||| CTGGTGGGAGACTGTGAGGATCCCAGgat NEDD8 hsa-miR-328 153 174 ugccuucCCGUCUCUCCCGGuc ||| |||||||| tattcctGGCCCAGAGGGCCct NEDD8 hsa-miR-330 193 216 agAGACGUCCGG-CACACGAAacg |:||||| || |||||||| agTTTGCAGTCCTGTGTGCTTccc NEDD8 hsa-miR-331 148 171 AAGAUCCUA---UCCGGGUC-CCCG ||| || || ||||||| |||| TTC-AGTATTCCTGGCCCAGAGGGC NEDD8 hsa-miR-331 132 149 aagaUCCUAUCCGGGUCCccg ||||| |||||| tgtgAGGAT---CCCAGGatt NEDD8 hsa-miR-345 170 200 CGG----GACC--UGAUCC----UCAGUCGU ||| |||| |||:|| |||: ||| GCCCTTGCTGGCTACTGGGTGTTAGTTTGCA NEDD8 hsa-miR-34a 70 88 uUGUUGGUCGAUUCUGUGACGGu || |||| | || ||||||| gAC-ACCA--T-AGCCACTGCCc NEDD8 hsa-miR-34c 67 88 cguuaGUCG-AUUGAUGUGACGGa || | ||:| ||||||| tgggaCACCATAGC--CACTGCCc NEDD8 hsa-miR-362 126 149 ugagUGUGGAUCCAAGGUUCCUAA || : ||| ||| |||||| ggagACTGTGAGGATCCCAGGATT NEDD8 hsa-miR-370 142 171 GGUCC--------AAGG-UGGGGUCGUCCG ||||| |||| : ||||| :||| CCAGGATTCAGTATTCCTGGCCCAGAGGGC NEDD8 hsa-miR-411 105 122 gCAUGCGAUAUGCCAGAUGAu ||| |:||: ||||||| aGTA--ATGTAT-GTCTACTg NEDD8 hsa-miR-425-3p 142 162 ccgCCUGUGCUGUAAGGGCua |||: | ::|||||:| ccaGGATTCAGTATTCCTGgc NEDD8 hsa-miR-449 65 88 uGGUCGAUUGUUAU--GUGACGGu |::| || ||| ||||||| tCTGGGACACCATAGCCACTGCCc NEDD8 hsa-miR-449b 65 88 cGGUCGAUUGUUAU--GUGACGGa |::| || ||| ||||||| tCTGGGACACCATAGCCACTGCCc NEDD8 hsa-miR-484 118 134 uaGCCCUCCCCUGACUCGGACu | || || ||| ||| taCTGGTGG-----GAGACTGt NEDD8 hsa-miR-489 98 121 CGACGG--CAUAUACACUACAG-UGA | |||| ||| |||| ||||| ||| GATGCCCAGTA-ATGT-ATGTCTACT NEDD8 hsa-miR-493-3p 158 177 GACCGUGUGUCAUCUGGAAgu ||||| || || :| |||| CTGGCCCAGAG-GGCCCTTgc NEDD8 hsa-miR-515-3p 30 49 uGCGAGGUUUUCUUCCGUgag |||| || || :||||| tCGCT-CATAATGAGGCAtca NEDD8 hsa-miR-518f* 201 223 ucucuuuCACGAAGGGAGAucuc |||||||||||| gtcctgtGTGCTTCCCTCTctta NEDD8 hsa-miR-522 58 80 uuGUGAGAUUUCCCUUGGUAaaa |||||| :|| ||||| ctCACTCTCTGGGACACCATagc NEDD8 hsa-miR-526a 203 223 ucuuuCACGAAGGGAGAucuc |||||||||||| cctgtGTGCTTCCCTCTctta NEDD8 hsa-miR-532 21 48 ugccaGGAU-GUGAG-----UUCCGUAc |||: |:||| :|||||| tttacCCTGTCGCTCATAATGAGGCATc NEDD8 hsa-miR-542-5p 124 146 gagCACUG-UACUACUAGGGGCu | ||| :||| |||||| | tggGAGACTGTGAGGATCCCAGg NEDD8 hsa-miR-555 139 165 UAGUCUCC-AAGUC-----GAAUGGGa ||| ||| ||||| || :||| ATCCCAGGATTCAGTATTCCTGGCCCa NEDD8 hsa-miR-565 65 87 uuuguCUGUAGCGCUCGGU--CGG |||| | : ||||| ||| tctggGACACCAT-AGCCACTGCC NEDD8 hsa-miR-566 156 173 caacCCUAGUGUCCGCGGG || || ||| |||| tcctGGCCCAGAGG-GCCC NEDD8 hsa-miR-582 115 136 ucauUGACCAACUUGUUGACAUU |||||| |:| :|||||:| gtctACTGGTGGGA-GACTGTGA NEDD8 hsa-miR-584 58 79 GAGUCAGGGUCCGUUUGGUAUu |||| ||:| || | |||||| CTCACTCTCTGGGACACCATAg NEDD8 hsa-miR-593 183 213 cGACUCGUUA-CGGAC--C--GAC-CACGGA |||:|:: | |::|| | ||| ||||:| aCTGGGTGTTAGTTTGCAGTCCTGTGTGCTT NEDD8 hsa-miR-596 162 183 GGG-CUCCUCGGCCCGUCCGAa ||| ||||: || || |||| CCCAGAGGGCCCTTGCTGGCTa NEDD8 hsa-miR-602 186 210 CCCGGCGUC-GACAGC-GGGCACAg |||: :|| :|| | ||:|||| GGGTGTTAGTTTGCAGTCCTGTGTg NEDD8 hsa-miR-602 159 178 cCCGGCGUCGACAGCGGGCACag |||| ||| | |||| || tGGCC-CAGAGG--GCCCTTGct NEDD8 hsa-miR-611 156 177 caGUCUGGGGCUCCCCAGGAGCG | |:||| || ||| |||:|| tcCTGGCCCAGA-GGGCCCTTGC NEDD8 hsa-miR-612 79 107 uuccucgagucuucGGG----ACGGGUCg ||| ||||||| gccactgccccctcCCCTGGATGCCCAGt NEDD8 hsa-miR-614 169 193 gguGGACCGUUC--UUGUCCGCAAg ||| || :| | ::||:||| ggcCCTTGCTGGCTACTGGGTGTTa NEDD8 hsa-miR-621 162 182 uccauUCGCGACAACGAUCGg || || |||||:|| cccagAGGGCCCTTGCTGGCt NEDD8 hsa-miR-624 160 186 acuuGUGUUCC----AUGACC-AUGAu || |:|| |:|||| |||| ggccCAGAGGGCCCTTGCTGGCTACTg NEDD8 hsa-miR-625 68 91 uCC--UGAUAUC-UUGAAAGGGGGA || || |||| || | |||||| gGGACACCATAGCCAC-TGCCCCCT NEDD8 hsa-miR-629 110 132 cgaccCGAAUG-CAACCCUCUug |: ||| | ||||||| tgtatGTCTACTGGTGGGAGAct NEDD8 hsa-miR-634 161 182 CAGGUUUCAACC--CCACGACCaa | |||:|| || |||||| GCCCAGAG--GGCCCTTGCTGGct NEDD8 hsa-miR-637 140 167 uGCGU-CUCGGGCUUUCGG---GGGUCa | || || :| | | || ||||| tCCCAGGATTCAGTATTCCTGGCCCAGa NEDD8 hsa-miR-642 143 172 GUUCU--GU-GUAA--ACC---UCUCCCug ||:|| || :||| ||| |||||| CAGGATTCAGTATTCCTGGCCCAGAGGGcc NEDD8 hsa-miR-644 63 86 cGAGAUUCU----U-UCGGUGuga ||||::|| | |||||| tCTCTGGGACACCATAGCCACtgc NEDD8 hsa-miR-645 149 167 AGUCGUCAUGGUCGGAUCU ||||:| | |::||| ||| TCAGTATTCCTGGCCCAGA NEDD8 hsa-miR-647 183 205 cuuCCUUCACUC--ACGUCGGug ||: || || |||||:| actGGGTGTTAGTTTGCAGTCct NEDD8 hsa-miR-650 201 216 CAGGACUCUCGCGACGGAGGa |||||| | |||:||| GTCCTGTG-----TGCTTCCc NEDD8 hsa-miR-658 73 96 UGGUUGCCUGGAUGAAGGGAGGCGg |||| | ||:| |||||| | ACCATAGCCACTGC-CCCCTCCCCt NEDD8 hsa-miR-663 198 220 CGCCAGGGCGC-CGCGGGGCGga || ||||:|:| || :||| | GCAGTCCTGTGTGCTTCCCTCtc NEDD8 hsa-miR-671 79 104 uGGAGGUCGGGGA-GGUCCCGAAGGa || |:: ||||| || || | || gCCACTGCCCCCTCCCCTGGATGCCc NEDD8 hsa-miR-765 45 66 GUAGUGGAAGGAAGAG-GAGgu |||||: | :| |||| ||| CATCATATATCCTCTCACTCtc NEDD8 hsa-miR-769-3p 123 145 uugguUCUGGGGCCUCUAGGGUC ||||: :| :|||||||| gtgggAGACTGTGAGGATCCCAG NEDD8 hsa-miR-770-5p 159 188 ACCGGGACU-----GUGC-ACC-AUGACCu |||||| || | :| ||| |||||| TGGCCCAGAGGGCCCTTGCTGGCTACTGGg NEDD8 hsa-miR-99a 164 190 GUGUUCUAG--CCUA--GAUG-CCCAa || |:|: | | | |||| |||| CAGAGGGCCCTTGCTGGCTACTGGGTg

DNA & RNA Element - miRcode Gene Name Type microRNA Seed Position Seed Type Total Cons% Tr Region NEDD8 High_conserved miR-503 chr14:24701092 7-mer-m8 7 ncRNA NEDD8 High_conserved miR-7/7ab chr14:24696569 7-mer-m8 13 ncRNA NEDD8 High_conserved miR-7/7ab chr14:24696972 7-mer-A1 16 ncRNA NEDD8 High_conserved miR-9/9ab chr14:24687715 7-mer-A1 11 ncRNA NEDD8 High_conserved miR-9/9ab chr14:24700934 7-mer-m8 29 ncRNA NEDD8 High_conserved miR-135ab/135a-5p chr14:24696867 8-mer 18 ncRNA NEDD8 High_conserved miR-141/200a chr14:24695847 7-mer-A1 9 ncRNA NEDD8 High_conserved miR-144 chr14:24696234 7-mer-A1 0 ncRNA NEDD8 High_conserved miR-145 chr14:24701479 8-mer 18 5pUTR, ncRNA NEDD8 High_conserved miR-146ac/146b-5p chr14:24697912 7-mer-A1 13 ncRNA NEDD8 High_conserved miR-150/5127 chr14:24686203 7-mer-A1 40 3pUTR, ncRNA NEDD8 High_conserved miR-15abc/16/16abc/195/322/424/497/1907 chr14:24687753 7-mer-m8 9 ncRNA NEDD8 High_conserved miR-181abcd/4262 chr14:24696280 8-mer 4 ncRNA NEDD8 High_conserved miR-182 chr14:24700969 7-mer-m8 22 ncRNA NEDD8 High_conserved miR-183 chr14:24697876 7-mer-m8 11 ncRNA NEDD8 High_conserved miR-192/215 chr14:24696016 7-mer-m8 16 ncRNA NEDD8 High_conserved miR-1ab/206/613 chr14:24695935 7-mer-A1 22 ncRNA NEDD8 High_conserved miR-200bc/429/548a chr14:24686176 7-mer-m8 18 3pUTR, ncRNA NEDD8 High_conserved miR-205/205ab chr14:24686428 7-mer-A1 58 ncRNA NEDD8 High_conserved miR-205/205ab chr14:24687792 7-mer-m8 7 ncRNA NEDD8 High_conserved miR-205/205ab chr14:24700942 7-mer-A1 44 ncRNA NEDD8 High_conserved miR-214/761/3619-5p chr14:24687752 7-mer-A1 9 ncRNA NEDD8 High_conserved miR-216a chr14:24687610 7-mer-m8 47 CDS, ncRNA NEDD8 High_conserved miR-221/222/222ab/1928 chr14:24695897 7-mer-A1 9 ncRNA NEDD8 High_conserved miR-23abc/23b-3p chr14:24687296 7-mer-A1 18 3pUTR NEDD8 High_conserved miR-24/24ab/24-3p chr14:24697031 7-mer-A1 9 ncRNA NEDD8 High_conserved miR-24/24ab/24-3p chr14:24697330 7-mer-A1 13 ncRNA NEDD8 High_conserved miR-24/24ab/24-3p chr14:24697821 7-mer-m8 11 ncRNA NEDD8 High_conserved miR-24/24ab/24-3p chr14:24700896 7-mer-m8 31 ncRNA NEDD8 High_conserved miR-24/24ab/24-3p chr14:24701630 7-mer-m8 27 5pUTR NEDD8 High_conserved miR-27abc/27a-3p chr14:24686196 7-mer-m8 31 3pUTR, ncRNA NEDD8 High_conserved miR-101/101ab chr14:24696234 7-mer-A1 0 ncRNA NEDD8 High_conserved miR-30abcdef/30abe-5p/384-5p chr14:24687819 8-mer 7 ncRNA NEDD8 High_conserved miR-31 chr14:24687836 7-mer-m8 24 ncRNA NEDD8 High_conserved miR-338/338-3p chr14:24701543 7-mer-A1 16 5pUTR, ncRNA NEDD8 High_conserved miR-34ac/34bc-5p/449abc/449c-5p chr14:24686245 7-mer-m8 29 3pUTR, ncRNA NEDD8 High_conserved miR-425/425-5p/489 chr14:24696874 7-mer-A1 13 ncRNA NEDD8 High_conserved miR-10abc/10a-5p chr14:24701070 7-mer-A1 9 ncRNA NEDD8 High_conserved miR-128/128ab chr14:24686197 7-mer-A1 29 3pUTR, ncRNA NEDD8 High_conserved miR-490-3p chr14:24696646 7-mer-m8 16 ncRNA NEDD8 Medium_conserved miR-539/539-5p chr14:24696463 7-mer-A1 24 ncRNA NEDD8 Medium_conserved miR-542-3p chr14:24697278 7-mer-m8 11 ncRNA NEDD8 Medium_conserved miR-543 chr14:24695839 7-mer-A1 9 ncRNA NEDD8 Medium_conserved miR-590-3p chr14:24696787 8-mer 11 ncRNA NEDD8 Medium_conserved miR-590-3p chr14:24696895 8-mer 27 ncRNA NEDD8 Medium_conserved miR-873 chr14:24696934 7-mer-A1 11 ncRNA NEDD8 Medium_conserved miR-149 chr14:24701589 8-mer 42 5pUTR NEDD8 Medium_conserved miR-185/882/3473/4306/4644 chr14:24701088 7-mer-A1 13 ncRNA NEDD8 Medium_conserved miR-186 chr14:24696803 8-mer 38 ncRNA NEDD8 Medium_conserved miR-197 chr14:24687208 7-mer-A1 29 3pUTR NEDD8 Medium_conserved miR-290-5p/292-5p/371-5p/293 chr14:24696137 7-mer-m8 11 ncRNA NEDD8 Medium_conserved miR-290-5p/292-5p/371-5p/293 chr14:24697296 7-mer-A1 13 ncRNA NEDD8 Medium_conserved miR-290-5p/292-5p/371-5p/293 chr14:24697595 7-mer-A1 13 ncRNA NEDD8 Medium_conserved miR-296-3p chr14:24701635 7-mer-m8 0 5pUTR NEDD8 Medium_conserved miR-326/330/330-5p chr14:24686164 7-mer-m8 16 3pUTR, ncRNA NEDD8 Medium_conserved miR-340-5p chr14:24696300 7-mer-m8 7 ncRNA NEDD8 Medium_conserved miR-340-5p chr14:24696771 7-mer-A1 7 ncRNA NEDD8 Medium_conserved miR-346 chr14:24687635 7-mer-m8 31 ncRNA NEDD8 Medium_conserved miR-374ab chr14:24695852 7-mer-m8 13 ncRNA NEDD8 Medium_conserved miR-376abd/376b-3p chr14:24696096 8-mer 16 ncRNA NEDD8 Medium_conserved miR-377 chr14:24696475 8-mer 7 ncRNA NEDD8 Medium_conserved miR-410/344de/344b-1-3p chr14:24695835 8-mer 9 ncRNA NEDD8 Medium_conserved miR-410/344de/344b-1-3p chr14:24696299 7-mer-A1 7 ncRNA NEDD8 Medium_conserved miR-411 chr14:24686211 7-mer-m8 31 3pUTR, ncRNA NEDD8 Medium_conserved miR-411 chr14:24696236 7-mer-m8 0 ncRNA NEDD8 Medium_conserved miR-421 chr14:24696149 7-mer-m8 13 ncRNA NEDD8 Medium_conserved miR-125a-3p/1554 chr14:24686371 7-mer-m8 18 3pUTR, CDS, ncRNA NEDD8 Medium_conserved miR-431 chr14:24696602 7-mer-A1 16 ncRNA NEDD8 Medium_conserved miR-433 chr14:24686989 7-mer-m8 4 3pUTR NEDD8 Medium_conserved miR-433 chr14:24687655 7-mer-A1 38 ncRNA NEDD8 Medium_conserved miR-448/448-3p chr14:24687742 7-mer-m8 11 ncRNA NEDD8 Medium_conserved miR-485-5p/1698/1703/1962 chr14:24697196 7-mer-m8 9 ncRNA NEDD8 Medium_conserved miR-485-5p/1698/1703/1962 chr14:24697359 7-mer-m8 7 ncRNA NEDD8 Medium_conserved miR-485-5p/1698/1703/1962 chr14:24697493 7-mer-m8 11 ncRNA NEDD8 Medium_conserved miR-485-5p/1698/1703/1962 chr14:24697857 7-mer-m8 7 ncRNA NEDD8 Medium_conserved miR-485-5p/1698/1703/1962 chr14:24700876 8-mer 40 ncRNA NEDD8 Medium_conserved miR-486-5p/3107 chr14:24700942 7-mer-A1 11 ncRNA NEDD8 Medium_conserved miR-491-5p chr14:24687372 7-mer-A1 44 CDS, ncRNA NEDD8 Medium_conserved miR-494 chr14:24687639 7-mer-A1 38 ncRNA

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score NEDD8 RAID00077528 hsa-miR-4726-5p miRNA MIMAT0019845 NEDD8 mRNA 4738 Prediction 0.1828 NEDD8 RAID00108847 hsa-miR-3679-5p miRNA MIMAT0018104 NEDD8 mRNA 4738 Prediction 0.1828 NEDD8 RAID00143431 hsa-miR-4713-5p miRNA MIMAT0019820 NEDD8 mRNA 4738 Prediction 0.1828 NEDD8 RAID00199561 hsa-miR-411-5p miRNA MIMAT0003329 NEDD8 mRNA 4738 CLIP-seq//Prediction 0.6308 NEDD8 RAID00674534 hsa-miR-5586-3p miRNA MIMAT0022288 NEDD8 mRNA 4738 Prediction 0.1828 NEDD8 RAID00690792 hsa-miR-34a-5p miRNA MIMAT0000255 NEDD8 mRNA 4738 CLIP-seq//Prediction 0.6308 NEDD8 RAID00782996 hsa-miR-4640-5p miRNA MIMAT0019699 NEDD8 mRNA 4738 Prediction 0.1828 NEDD8 RAID00855902 hsa-miR-665 miRNA MIMAT0004952 NEDD8 mRNA 4738 Prediction 0.1828 NEDD8 RAID01314059 hsa-miR-6805-5p miRNA MIMAT0027510 NEDD8 mRNA 4738 Prediction 0.1828 NEDD8 RAID01357964 hsa-miR-1260b miRNA MIMAT0015041 NEDD8 mRNA 4738 Prediction 0.1828 NEDD8 RAID01489345 hsa-miR-200c-3p miRNA MIMAT0000617 NEDD8 mRNA 4738 Prediction 0.1828 NEDD8 RAID01533113 hsa-miR-5693 miRNA MIMAT0022486 NEDD8 mRNA 4738 Prediction 0.1828 NEDD8 RAID01699314 hsa-miR-532-3p miRNA MIMAT0004780 NEDD8 mRNA 4738 Prediction 0.2202 NEDD8 RAID01984378 hsa-miR-200b-3p miRNA MIMAT0000318 NEDD8 mRNA 4738 Prediction 0.1828 NEDD8 RAID02308305 hsa-miR-27b-3p miRNA MIMAT0000419 NEDD8 mRNA 4738 Prediction 0.1828 NEDD8 RAID02411838 hsa-miR-326 miRNA MIMAT0000756 NEDD8 mRNA 4738 Prediction 0.1828 NEDD8 RAID02412109 hsa-miR-330-5p miRNA MIMAT0004693 NEDD8 mRNA 4738 Prediction 0.1828 NEDD8 RAID02446658 hsa-miR-4693-3p miRNA MIMAT0019785 NEDD8 mRNA 4738 Prediction 0.1828 NEDD8 RAID02537726 hsa-miR-3657 miRNA MIMAT0018077 NEDD8 mRNA 4738 Prediction 0.1828 NEDD8 RAID02566385 hsa-miR-34c-5p miRNA MIMAT0000686 NEDD8 mRNA 4738 CLIP-seq//Prediction 0.6308 NEDD8 RAID02634895 hsa-miR-486-3p miRNA MIMAT0004762 NEDD8 mRNA 4738 Prediction 0.1828 NEDD8 RAID03137052 hsa-miR-6753-5p miRNA MIMAT0027406 NEDD8 mRNA 4738 Prediction 0.1828 NEDD8 RAID03177249 hsa-miR-27a-3p miRNA MIMAT0000084 NEDD8 mRNA 4738 Prediction 0.1828 NEDD8 RAID03302327 hsa-miR-449b-5p miRNA MIMAT0003327 NEDD8 mRNA 4738 CLIP-seq//Prediction 0.6308 NEDD8 RAID03526761 hsa-miR-449a miRNA MIMAT0001541 NEDD8 mRNA 4738 CLIP-seq//Prediction 0.6308 NEDD8 RAID03554203 hsa-miR-1260a miRNA MIMAT0005911 NEDD8 mRNA 4738 Prediction 0.1828 NEDD8 RAID03623088 hsa-miR-429 miRNA MIMAT0001536 NEDD8 mRNA 4738 Prediction 0.1828 NEDD8 RAID03764140 hsa-miR-6873-5p miRNA MIMAT0027646 NEDD8 mRNA 4738 Prediction 0.1828 NEDD8 RAID03945109 hsa-miR-1185-5p miRNA MIMAT0005798 NEDD8 mRNA 4738 Prediction 0.1828 NEDD8 RAID03970075 hsa-miR-1288-3p miRNA MIMAT0005942 NEDD8 mRNA 4738 Prediction 0.1828 NEDD8 RAID04008056 hsa-miR-6858-3p miRNA MIMAT0027617 NEDD8 mRNA 4738 Prediction 0.1828