iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

SNP - dbSNP
dbSNP	Type	Alleles	Het	Se(het)	Fxn-class	Gene Name	Assembly	Chr-pos	Sequence	Entrez Gene
rs755050	snp	C/T	0.406468	0.194981	intron-variant	SPG20	GRCh38.p7	13:36323050	ATAATCTTGGAGAAA[C/T]CTTAGGGAGGCATCA	23111
rs755051	snp	C/T	0.395453	0.203331	intron-variant	SPG20	GRCh38.p7	13:36323096	TGCTCACTCTCAACC[C/T]TAGGATGATATGTTG	23111
rs912926	snp	A/G	0.0279526	0.114869	intron-variant	SPG20	GRCh38.p7	13:36326363	ATTTTCCCAATAGTA[A/G]AACAGAATAATAGGC	23111
rs1041137	snp	A/G	0.0279526	0.114869	intron-variant	SPG20	GRCh38.p7	13:36313917	CTCTCCAACACATCA[A/G]AACAACCCTTTAACc	23111
rs1041138	snp	A/C	0.251296	0.249997	intron-variant	SPG20, SPG20-AS1	GRCh38.p7	13:36366132	TGAACTCCTTTCTAA[A/C]GTATTTAGATTGCTT	23111
rs1041139	snp	A/G	0.48491	0.0855403	intron-variant	SPG20, SPG20-AS1	GRCh38.p7	13:36365986	AGAGGAAGCTACTGC[A/G]GGAATCCAGGTGAGA	23111
rs1041140	snp	C/T	0.00104076	0.0227881	intron-variant	SPG20, SPG20-AS1	GRCh38.p7	13:36365891	TGCAGGATTTGGTGA[C/T]TGGCTCTGTATGAGA	23111
rs1054141	snp	A/G	0.410737	0.191478	utr-variant-3-prime, nc-transcript-variant	SPG20	GRCh38.p7	13:36303841	AAGAATTCTCAAAAA[A/G]ACTTGTTCAAAACAG	23111
rs1054144	snp	C/T	0.409212	0.192748	utr-variant-3-prime, nc-transcript-variant	SPG20	GRCh38.p7	13:36303757	AGGAAATGGAATGGT[C/T]TCTTTGATTTAAAAT	23111
rs1054149	snp	A/G	0.030278	0.119257	utr-variant-3-prime, nc-transcript-variant	SPG20	GRCh38.p7	13:36303914	TTTGCACTAATTGTG[A/G]ATTTTTTTAGATGCT	23111
rs1054152	snp	A/G	0.238171	0.24972	utr-variant-3-prime, nc-transcript-variant	SPG20	GRCh38.p7	13:36303519	ATTGAGTTTACTAAT[A/G]GTAAACATTTTTATT	23111
rs1056850	snp	A/C	0.376394	0.215696	intron-variant	SPG20, SPG20-AS1	GRCh38.p7	13:36368396	ATTGAAATTTTGGAG[A/C]GTATTTTATTTCAGT	23111
rs1114529	snp	C/T	0.0217236	0.101931	intron-variant	SPG20	GRCh38.p7	13:36337378	agatctcaccttgaa[C/T]tgtaatacccataat	23111
rs1341482	snp	C/T	0	0	intron-variant	SPG20	GRCh38.p7	13:36325272	AACTGCAATGAAAAA[C/T]CTTTTCACTTTTACT	23111
rs1341484	snp	C/T	0	0	intron-variant, upstream-variant-2KB	SPG20, SPG20-AS1	GRCh38.p7	13:36346010	GTTCTCAGTCCCTTC[C/T]CTCGCGGGAGTGTGG	23111
rs1341485	snp	C/T	0.375996	0.215928	intron-variant	SPG20, SPG20-AS1	GRCh38.p7	13:36365248	GCACTGTATAATTTT[C/T]TTTTACTTTAACCAT	23111
rs1341486	snp	A/C	0.40853	0.193309	intron-variant	SPG20, SPG20-AS1	GRCh38.p7	13:36365009	CCAAGGAGTCATGCA[A/C]AACAGTTTAGTTCTT	23111
rs1417841	snp	G/T	0.48	0.0979796	upstream-variant-2KB	SPG20	GRCh38.p7	13:36371620	TGTGTGTGTGTGTGT[G/T]TGTGTGTGTGTGTGT	23111
rs1570906	snp	C/T	0.252421	0.249988	intron-variant	SPG20, SPG20-AS1	GRCh38.p7	13:36366376	GGTATACCAGGTAAG[C/T]GATGTGGTGCTAATG	23111
rs1886856	snp	C/T	0.375996	0.215928	intron-variant, nc-transcript-variant	SPG20, SPG20-AS1	GRCh38.p7	13:36369640	GACTTTAACATAATT[C/T]AATGCCCACTGACTG	23111
rs1886857	snp	C/T	0.485799	0.0830599	upstream-variant-2KB	SPG20	GRCh38.p7	13:36371456	ATCTAGCGTGACATT[C/T]TCCCTCTGTTTAGTG	23111
rs1925835	snp	C/G	0.406123	0.195258	intron-variant	SPG20	GRCh38.p7	13:36325989	ACTAAGGTGCTGGTA[C/G]ATTTGGTCTCTGGTG	23111
rs1925836	snp	A/G	0.410737	0.191478	intron-variant	SPG20	GRCh38.p7	13:36329863	CATGTACAAGAGAAA[A/G]TGAATTTAAAGGCAA	23111
rs1925837	snp	A/T			intron-variant	SPG20, SPG20-AS1	GRCh38.p7	13:36350337	AACTATCTCCGTTTT[A/T]TACTGAAATAATTAC	23111
rs2025647	snp	A/T	0.497641	0.0342639	intron-variant	SPG20, SPG20-AS1	GRCh38.p7	13:36363019	ATCTGTCTTTTTTTT[A/T]AAAAAAATATTCAGA	23111
rs2025648	snp	C/T	0.000399281	0.0141238	intron-variant	SPG20, SPG20-AS1	GRCh38.p7	13:36361848	AATTGTAAATATCAA[C/T]AGAGATTACAATAGT	23111
rs2025649	snp	A/G	0.271162	0.249103	intron-variant	SPG20, SPG20-AS1	GRCh38.p7	13:36361794	TAAGAATGTTGTAGT[A/G]TAATTAAAAATGTAA	23111
rs2148049	snp	C/T	0.0217236	0.101931	utr-variant-3-prime, nc-transcript-variant	SPG20	GRCh38.p7	13:36303741	TAATCTATTTTTATT[C/T]ATTTTAAATCAAAGA	23111
rs2148050	snp	C/T			intron-variant	SPG20	GRCh38.p7	13:36311187	aggataaagaagtat[C/T]ctgtgaaacgcacac	23111
rs2274293	snp	C/T	0.405044	0.196115	SPG20	13	allele_origin=T(germline)/C(germline)	13:36312332	ACCTTGAACACTACT[C/T]GCTGCTACAACCATA	23111
rs2274294	snp	C/T	0.00993419	0.0697739	intron-variant	SPG20	GRCh38.p7	13:36312776	TGTTTGCTTTAAAGC[C/T]GTGCTTGCAGAGCCT	23111
rs2274295	snp	A/C	0.00358779	0.0422022	intron-variant	SPG20	GRCh38.p7	13:36331746	GAAACATCAACATCA[A/C]CAAATCCCCAAGAAA	23111
rs2281863	snp	A/G	0.251578	0.249995	intron-variant	SPG20, SPG20-AS1	GRCh38.p7	13:36369323	ACGATTATGAAGAGT[A/G]TAAGACTAACATATC	23111
rs2281864	snp	A/G	0.409721	0.192325	intron-variant, utr-variant-5-prime, nc-transcript-variant, upstream-variant-2KB	SPG20, SPG20-AS1	GRCh38.p7	13:36346475	GGCGGCGTGCTGCGG[A/G]CTCTGTGGCGGGAGC	23111
rs2874915	snp	A/G	0.406296	0.19512	intron-variant	SPG20	GRCh38.p7	13:36324482	tcagcttattgtcaa[A/G]tcactagctagcctt	23111
rs2874916	snp	A/G	0.42263	0.180829	intron-variant	SPG20, SPG20-AS1	GRCh38.p7	13:36349273	gtctcaaacaaacaa[A/G]caaaaaactgcagta	23111
rs3082907	in-del	-/CC/CT			intron-variant	SPG20, SPG20-AS1	GRCh38.p7	13:36350621	TTCTAACTTTTCTCC[-/CC/CT]TGTCTTTTTTTCTTA	23111
rs3082908	in-del	-/AAA/AAAAAA	0	0	intron-variant	SPG20, SPG20-AS1	GRCh38.p7	13:36359942	aaaaaaaaaaaaaaa[-/AAA/AAAAAA]CACCTCTTTGAACAT	23111
rs3082910	in-del	-/AA			upstream-variant-2KB	SPG20	GRCh38.p7	13:36371615	acacacacacacaca[-/AA]cacaaacacacacac	23111
rs3736919	snp	C/T	0.485141	0.0849032	intron-variant, nc-transcript-variant	SPG20, SPG20-AS1	GRCh38.p7	13:36365551	TTCTCCTATAAACCG[C/T]CTATTGATACCTACC	23111
rs3736920	snp	A/G	0.378494	0.214451	intron-variant	SPG20, SPG20-AS1	GRCh38.p7	13:36365621	TATGTTGAAATATTT[A/G]TCCAACTTTATCCCT	23111
rs4054838	snp	A/C	0.5	0	upstream-variant-2KB	SPG20	GRCh38.p7	13:36371612	acacacacacacaca[A/C]acacacaaacacaca	23111
rs4142159	snp	C/T	0.406468	0.194981	intron-variant	SPG20	GRCh38.p7	13:36328454	AAGACTCATTTTAGT[C/T]ATAATGTCCTGTAGG	23111
rs4255658	snp	A/C	0.375996	0.215928	upstream-variant-2KB	SPG20	GRCh38.p7	13:36370436	CACTTTATTTTTCTC[A/C]CAAACCAAGAATATC	23111
rs4287440	snp	C/T	0.377385	0.215112	utr-variant-5-prime, downstream-variant-500B	SPG20, SPG20-AS1	GRCh38.p7	13:36370137	GATTTCCTTCCAGGA[C/T]TGAAGAAAACATGCA	23111
rs4390466	snp	C/T	0.0279526	0.114869	intron-variant	SPG20	GRCh38.p7	13:36319361	atacctctactccct[C/T]cttggcaaccgatca	23111
rs4638443	snp	C/T	0.403158	0.197592	intron-variant	SPG20	GRCh38.p7	13:36321425	cccaattcttagacc[C/T]tttatacctgttttt	23111
rs4941833	snp	C/T	0.20511	0.245937	intron-variant, upstream-variant-2KB	SPG20, SPG20-AS1	GRCh38.p7	13:36345802	AAAGGCTGCCCAACC[C/T]TGACGGGGCCATGGG	23111
rs4941834	snp	A/T	0	0	intron-variant, upstream-variant-2KB	SPG20, SPG20-AS1	GRCh38.p7	13:36347703	aaagactatgactgt[A/T]ttctcacttccacgt	23111
rs4941835	snp	A/G	0.0267878	0.112589	intron-variant	SPG20, SPG20-AS1	GRCh38.p7	13:36349157	aatcctagctaccca[A/G]gaggctgaggcagga	23111
rs4943362	snp	C/G	0	0	intron-variant, utr-variant-5-prime, upstream-variant-2KB	SPG20, SPG20-AS1	GRCh38.p7	13:36346753	CCACGTCGGCTGCTC[C/G]GCGCCTGCGCAATCT	23111
rs4943363	snp	A/C	0.000399281	0.0141238	intron-variant	SPG20, SPG20-AS1	GRCh38.p7	13:36366891	GAAAGAAAATTCAAT[A/C]ATCAGACTgaagcaa	23111
rs5802819	in-del	-/C			intron-variant	SPG20	GRCh38.p7	13:36330948	AAATTATCTTCATGT[-/C]ACCATTTAGACCCAT	23111
rs5802820	in-del	-/T	0.267908	0.249358	intron-variant	SPG20, SPG20-AS1	GRCh38.p7	13:36362793	TAATGTGGAGGATAC[-/T]TTTTTTTTTTTAAAT	23111
rs6563467	snp	A/G	0.251859	0.249993	intron-variant	SPG20, SPG20-AS1	GRCh38.p7	13:36364141	GTTTTCATTCTCCAC[A/G]TTATCCCTGGACCCT	23111
rs7317988	snp	A/T	0.41275	0.189769	utr-variant-3-prime, nc-transcript-variant	SPG20	GRCh38.p7	13:36303548	ATTGTTTATATATAT[A/T]TTTTTTACAAGTTTT	23111
rs7321457	snp	C/T	0.000197791	0.00994266	missense, nc-transcript-variant	SPG20	GRCh38.p7	13:36314334	TCTTCTGGTTGAATC[C/T]GCTCTCGGAGTTTAG	23111
rs7325682	snp	C/T	0.433673	0.1696	intron-variant	SPG20	GRCh38.p7	13:36313602	cttttatatactgca[C/T]tcttgctgcaccttt	23111
rs7326853	snp	C/T	0.391024	0.206427	intron-variant, upstream-variant-2KB	SPG20, SPG20-AS1	GRCh38.p7	13:36344824	ATCTGATGTATTAAA[C/T]AGTACCTACACCAGT	23111
rs7327376	snp	A/G	0.273049	0.248935	upstream-variant-2KB	SPG20	GRCh38.p7	13:36371173	GTGTGTACCTTCTCT[A/G]TGTATGTATGTTCTG	23111
rs7327507	snp	C/T	0.238749	0.249747	intron-variant	SPG20	GRCh38.p7	13:36330234	TCACTCAGTAAACAG[C/T]GAAGTGAAGATGAAC	23111
rs7333861	snp	G/T	0.406641	0.194842	utr-variant-3-prime, nc-transcript-variant	SPG20	GRCh38.p7	13:36303441	CTTTACCCTGATTAT[G/T]AATAGAACCTTTCCT	23111
rs7333919	snp	A/G	0.255782	0.249933	intron-variant	SPG20, SPG20-AS1	GRCh38.p7	13:36364902	CAGCCCCCTTCATCC[A/G]TTCTCCACACTGACC	23111
rs7334585	snp	G/T	0.490836	0.0670685	downstream-variant-500B	SPG20	GRCh38.p7	13:36301359	GAAACACTCATACTC[G/T]ATATATAGAGAAAGA	23111
rs7334950	snp	A/G	0.16028	0.233346	intron-variant	SPG20, SPG20-AS1	GRCh38.p7	13:36361680	AAGTGCTTACACCAC[A/G]CCTGGCCCCTTTGCA	23111
rs7334984	snp	C/T	0.251296	0.249997	intron-variant	SPG20, SPG20-AS1	GRCh38.p7	13:36367684	ACAGAAGATCTGAAG[C/T]AAACAGGGAGGTAGA	23111
rs7335635	snp	A/G	0.39121	0.2063	intron-variant	SPG20	GRCh38.p7	13:36342848	tcactaaactgatct[A/G]cctgagaatatgccc	23111
rs7336020	snp	C/T	0.0138799	0.0821421	utr-variant-3-prime, nc-transcript-variant	SPG20	GRCh38.p7	13:36303215	TAATTAAGTAGCCAC[C/T]AGAAGATCAGAAATT	23111
rs7336065	snp	A/G	0.00119737	0.0244387	intron-variant	SPG20	GRCh38.p7	13:36312965	CTCAGTTATCTCGGT[A/G]AATAAAAGTAAACAA	23111
rs7339142	snp	G/T	0.163564	0.234582	intron-variant	SPG20, SPG20-AS1	GRCh38.p7	13:36365041	TGTCTCCTCTGACAC[G/T]GGAGGTTGCATGATG	23111
rs7358890	snp	G/T	0.492871	0.0592773	intron-variant	SPG20	GRCh38.p7	13:36324324	agccccaagtcacta[G/T]gtagaagccagacta	23111
rs7981164	snp	A/G	0.030278	0.119257	intron-variant	SPG20	GRCh38.p7	13:36334385	TATCACCACAGTCTC[A/G]ACTTCTAAACcaagg	23111
rs7981274	snp	C/T	0.42263	0.180829	intron-variant	SPG20, SPG20-AS1	GRCh38.p7	13:36352428	ATATGTGTAACAGAG[C/T]GGTGGAGTGGGATTT	23111
rs7981967	snp	A/T	0.188631	0.242351	intron-variant	SPG20, SPG20-AS1	GRCh38.p7	13:36352804	AAAAAAAAAAAAAAA[A/T]TGAAAATTAGCCAGG	23111
rs7984721	snp	C/T	0.410399	0.191761	intron-variant	SPG20, SPG20-AS1	GRCh38.p7	13:36351330	AAAAAAAAAAGTTTG[C/T]ACTCAATAAATATTG	23111
rs7986488	snp	A/G	0.410399	0.191761	intron-variant, upstream-variant-2KB	SPG20, SPG20-AS1	GRCh38.p7	13:36348221	agctggggaggcaga[A/G]gcagcagtgactgag	23111
rs7989684	snp	A/G	0.0287284	0.116357	intron-variant	SPG20, SPG20-AS1	GRCh38.p7	13:36358390	CAGCTGCAAAGACTT[A/G]TTGCTGTCATGACTA	23111
rs7992079	snp	C/T	0.000399281	0.0141238	intron-variant	SPG20	GRCh38.p7	13:36309160	gaggcaggagaatgg[C/T]gtgaacctgggaggc	23111
rs7993139	snp	A/G	0.410737	0.191478	intron-variant, upstream-variant-2KB	SPG20, SPG20-AS1	GRCh38.p7	13:36348391	TTTTTTAAATTTCCA[A/G]CAGCCATAAAGATGA	23111
rs7993291	snp	A/G	0.410399	0.191761	intron-variant	SPG20	GRCh38.p7	13:36342288	AATTGAAGTTTGCAA[A/G]CATTAATTGCCTTAG	23111
rs7994420	snp	C/T	0.251578	0.249995	upstream-variant-2KB	SPG20	GRCh38.p7	13:36370554	TTACCCCATCAGGTC[C/T]TCATCTGTAAGATGA	23111
rs7996870	snp	A/G	0.41507	0.187755	intron-variant	SPG20	GRCh38.p7	13:36337098	tgtacagtggtcccc[A/G]cttatgtatagtttc	23111
rs7997604	snp	G/T	0.00517822	0.0506191	intron-variant	SPG20	GRCh38.p7	13:36341022	gtgcatgcgacaaag[G/T]atgaaagagataaaa	23111
rs7997877	snp	A/G	0.0123036	0.0774623	intron-variant	SPG20, SPG20-AS1	GRCh38.p7	13:36368798	catgatctggagatc[A/G]agaccatctggccaa	23111
rs7998522	snp	C/G	0.406868	0.195284	intron-variant	SPG20	GRCh38.p7	13:36325093	tacgtcaagtcaccg[C/G]ggatgtgatggcttg	23111
rs7999963	snp	A/G	0.000399281	0.0141238	intron-variant	SPG20	GRCh38.p7	13:36341262	TAGAGCAACTAtgtc[A/G]aacagaactgtaatg	23111
rs9285108	snp	A/C	0.00688949	0.0582862	intron-variant	SPG20	GRCh38.p7	13:36312107	acaacaacaacaaca[A/C]aaCAGAGATTTAGTC	23111
rs9315411	snp	C/T	0.0372196	0.131242	intron-variant	SPG20	GRCh38.p7	13:36336837	aaaaaaaattttaaa[C/T]ctgattgcctgcaac	23111
rs9315412	snp	A/C	0.397994	0.201489	intron-variant	SPG20, SPG20-AS1	GRCh38.p7	13:36356703	caagctgcacctcga[A/C]caccttgggcacatg	23111
rs9315413	snp	C/T	0.200492	0.245049	intron-variant	SPG20, SPG20-AS1	GRCh38.p7	13:36367454	accgcctcctccagc[C/T]tctgcatatatacct	23111
rs9315414	snp	A/G	0.0916144	0.193427	intron-variant	SPG20, SPG20-AS1	GRCh38.p7	13:36367521	tggctttggagaccc[A/G]tccctctgtctgtgt	23111
rs9531794	snp	C/T	0.492823	0.0594727	intron-variant	SPG20	GRCh38.p7	13:36313368	CACTGCCTAGTAACA[C/T]CACAGCCGCCATAAC	23111
rs9531797	snp	C/G	0.410737	0.191478	intron-variant	SPG20	GRCh38.p7	13:36317125	cagccttcccttgac[C/G]tttaatcattgcagg	23111
rs9531798	snp	C/T	0.0275645	0.114116	intron-variant	SPG20	GRCh38.p7	13:36317493	tctgcgccccaatcc[C/T]ttatttccgtgcccc	23111
rs9531804	snp	C/T	0.492823	0.0594727	intron-variant	SPG20	GRCh38.p7	13:36319990	cctaagcacggttag[C/T]gcagtcagaattctt	23111
rs9531841	snp	A/G	0.41023	0.191902	intron-variant	SPG20	GRCh38.p7	13:36344152	AGCAGAGTGAGGGAG[A/G]GGTGAAGAAAACCCA	23111
rs9531842	snp	C/G	0.409891	0.192184	intron-variant, utr-variant-5-prime, upstream-variant-2KB	SPG20, SPG20-AS1	GRCh38.p7	13:36346781	TCTCTTTCTCTCCAG[C/G]GAAACCGAGGCCTCC	23111
rs9531889	snp	A/G	0.0729998	0.176553	intron-variant	SPG20, SPG20-AS1	GRCh38.p7	13:36358625	TAGTTTAATTTATAT[A/G]TAGAGAAGTCCCTGT	23111
rs9531901	snp	C/T	0.375996	0.215928	intron-variant	SPG20, SPG20-AS1	GRCh38.p7	13:36369088	AAATCAGCTATTGAT[C/T]TTCTTCCAAGGTCAT	23111
rs9547190	snp	C/T	0.409041	0.192888	utr-variant-3-prime, nc-transcript-variant	SPG20	GRCh38.p7	13:36302566	TCTGGTCAAAGCTAA[C/T]TGTTTAAAGTTTATG	23111

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