DNA & RNA Element - circBase circRNA ID Chrom Start End Strand hsa_circ_0066023 chr3 52438468 52440923 - hsa_circ_0066024 chr3 52441414 52444009 - hsa_circ_0066021 chr3 52438468 52439310 - hsa_circ_0066025 chr3 52442489 52442622 - hsa_circ_0066026 chr3 52443569 52444009 - hsa_circ_0066022 chr3 52438468 52439928 -

DNA & RNA Element - CircNet Circ ID GITPosition Express Symbol Entrez Category Strand Refered Name hsa-circ-BAP1-antisense.1 NM_004656Tchr3:52435900-52436029 expressed BAP1 8314 protein-coding + not_available hsa-circ-BAP1-antisense.2 NM_004656Tchr3:52435895-52436029 expressed BAP1 8314 protein-coding + not_available hsa-circ-BAP1-antisense.3 NM_004656Tchr3:52436287-52442095 expressed BAP1 8314 protein-coding + not_available hsa-circ-BAP1-antisense.4 NM_004656Tchr3:52440957-52441193 expressed BAP1 8314 protein-coding + hsa_circ_0124129 hsa-circ-BAP1-overlap.1 NM_004656Tchr3:52443569-52444009 expressed BAP1 8314 protein-coding - hsa_circ_0066026 hsa-circ-BAP1-overlap.3 NM_004656Tchr3:52441414-52444009 expressed BAP1 8314 protein-coding - hsa_circ_0066024 hsa-circ-BAP1-overlap.5 NM_004656Tchr3:52438627-52439780 expressed BAP1 8314 protein-coding - not_available hsa-circ-BAP1-overlap.6 NM_004656Tchr3:52439125-52440338 expressed BAP1 8314 protein-coding - not_available hsa-circ-BAP1.1 NM_004656Tchr3:52438468-52440923 expressed BAP1 8314 protein-coding - hsa_circ_0066023 hsa-circ-BAP1.2 NM_004656Tchr3:52438468-52439928 expressed BAP1 8314 protein-coding - hsa_circ_0066022 hsa-circ-BAP1.3 NM_004656Tchr3:52438468-52439310 expressed BAP1 8314 protein-coding - hsa_circ_0066021 hsa-circ-BAP1.4 NM_004656Tchr3:52442489-52442622 expressed BAP1 8314 protein-coding - hsa_circ_0066025 hsa-circ-BAP1.5 NM_004656Tchr3:52441189-52441332 expressed BAP1 8314 protein-coding x chr3:52441189-52441332_PA1_RNaseR hsa-circ-BAP1.6 NM_004656Tchr3:52441973-52442093 expressed BAP1 8314 protein-coding - hsa_circ_0124130 hsa-circ-BAP1.7 NM_004656Tchr3:52439780-52440923 expressed BAP1 8314 protein-coding - hsa_circ_0124128

DNA & RNA Element - miRTarBase Target Gene (Entrez ID) miRTarBase ID miRNA Species (miRNA) Target Gene Species (Target Gene) Experiments Support Type References (PMID) MIRT000724 hsa-miR-200b-3p Homo sapiens BAP1 8314 Homo sapiens Reporter assay Functional MTI 20005803 MIRT000724 hsa-miR-200b-3p Homo sapiens BAP1 8314 Homo sapiens Microarray Functional MTI (Weak) 17875710 MIRT000726 hsa-miR-200c-3p Homo sapiens BAP1 8314 Homo sapiens Reporter assay Functional MTI 20005803 MIRT000726 hsa-miR-200c-3p Homo sapiens BAP1 8314 Homo sapiens Microarray Functional MTI (Weak) 17875710 MIRT000727 hsa-miR-141-3p Homo sapiens BAP1 8314 Homo sapiens Reporter assay Functional MTI 20005803 MIRT000727 hsa-miR-141-3p Homo sapiens BAP1 8314 Homo sapiens Microarray Functional MTI (Weak) 17875710 MIRT000730 hsa-miR-200a-3p Homo sapiens BAP1 8314 Homo sapiens Reporter assay Functional MTI 20005803 MIRT000730 hsa-miR-200a-3p Homo sapiens BAP1 8314 Homo sapiens Microarray Functional MTI (Weak) 17875710 MIRT016637 hsa-miR-429 Homo sapiens BAP1 8314 Homo sapiens Reporter assay Functional MTI 20005803 MIRT036361 hsa-miR-1229-3p Homo sapiens BAP1 8314 Homo sapiens CLASH Functional MTI (Weak) 23622248 MIRT037201 hsa-miR-877-3p Homo sapiens BAP1 8314 Homo sapiens CLASH Functional MTI (Weak) 23622248 MIRT038727 hsa-miR-93-3p Homo sapiens BAP1 8314 Homo sapiens CLASH Functional MTI (Weak) 23622248 MIRT441127 hsa-miR-218-5p Homo sapiens BAP1 8314 Homo sapiens HITS-CLIP Functional MTI (Weak) 23212916

DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0010195 hsa-let-7a-2* 8314 BAP1 ccuuucgauccuccGACAUGUc ||||||| gcaggccccuuuauCUGUACAu 2 9 1131 1152 [hg19:3:52435152-52435173:-] 0.5926 140 7 -10.03 -0.6887 MIMAT0004489 hsa-miR-16-1* 8314 BAP1 agucGUC-GUGUCAAUUAUGACc :|| | | || ||||||| ccucUAGCCCCUGUAAAUACUGg 2 19 1216 1238 [hg19:3:52435066-52435088:-] 0.5926 153 7 -17.03 -0.5727 MIMAT0000071 hsa-miR-17* 8314 BAP1 gauguucacggaaGUGACGUCa :||||||| gggcacagcgaggUACUGCAGc 2 10 221 242 [hg19:3:52436062-52436083:-] 0.6177 141 7 -17.44 -0.1460 MIMAT0004584 hsa-let-7g* 8314 BAP1 cguuccgucaccGGACAUGUc :||||||| caggccccuuuaUCUGUACAu 2 10 1132 1152 [hg19:3:52435152-52435172:-] 0.5926 141 7 -14.31 -0.6887 MIMAT0004594 hsa-miR-132* 8314 BAP1 ucauuguUAGCUUUCGGUGCCa ||| | ||||||| uccuuguAUC--AUGCCACGGu 2 16 423 442 [hg19:3:52435862-52435881:-] 0.5323 144 7 -16.93 -0.2739 MIMAT0004608 hsa-miR-146a* 8314 BAP1 gacuucuugacuuaaAGUCUCc |||||| uauauauuuuaccuaUCAGAGa 2 8 301 322 [hg19:3:52435982-52436003:-] 0.7341 120 6 -7.60 -0.1614 MIMAT0004611 hsa-miR-185* 8314 BAP1 cugGUCUCCUUUCGGUCGGGGa || :| |:| :||||||| ugaCACGGCAGA-UCAGCCCCa 2 20 171 191 [hg19:3:52436113-52436133:-] 0.5492 153 7 -22.28 -0.5902 MIMAT0004611 hsa-miR-185* 8314 BAP1 cuGGUCUCCUU-----UCGGUCGGGGa :|||| ||: : |||||||| gcUCAGAAGAGCCUCUGUCCAGCCCCu 2 21 835 861 [hg19:3:52435443-52435469:-] 0.6205 147 7 -26.27 -0.2429 MIMAT0004611 hsa-miR-185* 8314 BAP1 cuGGUCU-CCUUUCGGUCGGGGa ||||: || ||||||| gcCCAGGCCCCAACACAGCCCCa 2 21 1071 1093 [hg19:3:52435211-52435233:-] 0.6279 147 7 -22.21 -0.4199 MIMAT0004613 hsa-miR-188-3p 8314 BAP1 acGUUUGGGACGUACACCCUc ::|:| |||||||||| ccUGAGCAGAGCAUGUGGGAa 2 20 662 682 [hg19:3:52435622-52435642:-] 0.5604 159 7 -21.81 -0.3452 MIMAT0004671 hsa-miR-194* 8314 BAP1 gucUAUUG--UCGUCGGGGU-GACc || || | :||:|||| ||| aguAUUACUGAAUAGUCCCAGCUGg 2 20 84 108 [hg19:3:52436196-52436220:-] 0.6215 122 0 -21.44 -0.1208 MIMAT0000683 hsa-miR-302a* 8314 BAP1 ucGUUCAUGUAGGUGCAA-AUUCa | || ::||| :||| |||| caCCAGCCUGUCCCUGUUGUAAGg 2 22 514 537 [hg19:3:52435767-52435790:-] 0.5598 125 0 -11.26 -0.1458 MIMAT0009199 hsa-miR-365* 8314 BAP1 ugUCGACGGGGACUU-UCAGGGa || | :: ||||| |||||| ccAG-UAUUACUGAAUAGUCCCa 2 21 82 103 [hg19:3:52436201-52436222:-] 0.6215 126 6 -20.09 -0.5208 MIMAT0004690 hsa-miR-379* 8314 BAP1 ucaaucaccUGGUACAA-UGUAu |||||||| |||| caacaugccACCAUGUUGACAUa 2 14 347 369 [hg19:3:52435935-52435957:-] 0.6575 129 0 -15.44 -0.7090 MIMAT0000754 hsa-miR-337-3p 8314 BAP1 cuUCU-UUCCGUAGUAUAUCCUc ||| |:||: | ||||||| agAGACAGGGUUGCUUAUAGGAa 2 21 894 916 [hg19:3:52435388-52435410:-] 0.6279 159 7 -15.81 -0.2626 MIMAT0004748 hsa-miR-423-5p 8314 BAP1 uuUCAGAGCGAGAGACGGGGAGu || ||| || | ||||||| agAGCCUCUGUC-CAGCCCCUCa 2 22 842 863 [hg19:3:52435441-52435462:-] 0.6279 159 7 -24.21 -0.6890 MIMAT0004748 hsa-miR-423-5p 8314 BAP1 uuucaGAGCGAGA-GACGGG-GAGu || |||| | |||| ||| uggccCUGACUCUGCAGCCCACUCu 2 19 8 32 [hg19:3:52436272-52436296:-] 0.6421 121 0 -17.67 -0.1418 MIMAT0004762 hsa-miR-486-3p 8314 BAP1 uaggaCAUGACUCGACGGGGc || || ||||||| ccaggGUCCUUCCCUGCCCCa 2 17 49 69 [hg19:3:52436235-52436255:-] 0.6215 148 7 -17.81 -0.4806 MIMAT0002824 hsa-miR-498 8314 BAP1 cuuuuuGCGGGGGACCG-AACUUu :||| |||| ||||| ggccucUGCCAGAUGGCUUUGAAa 2 18 1095 1118 [hg19:3:52435186-52435209:-] 0.6206 121 0 -18.76 -0.2427 MIMAT0002827 hsa-miR-515-3p 8314 BAP1 uugcgagguuuucUUCCGUGAg |||||||| ccucagccucugcAAGGCACUc 2 10 953 974 [hg19:3:52435330-52435351:-] 0.6279 145 7 -19.65 -0.1006 MIMAT0002847 hsa-miR-518c* 8314 BAP1 guCUUUCACGAAGGGAGGUCUCu |:|: || : :||||||| uuGGAGCCCCUGUGUUCCAGAGg 2 22 1007 1029 [hg19:3:52435275-52435297:-] 0.6279 149 7 -18.56 -0.1654 MIMAT0002849 hsa-miR-524-5p 8314 BAP1 cucuuUCACGAAGGGA-AACAUc || : ||||| ||||| ccaccAGCCUGUCCCUGUUGUAa 2 18 513 535 [hg19:3:52435769-52435791:-] 0.5598 121 0 -12.69 -0.1008 MIMAT0002855 hsa-miR-520d-5p 8314 BAP1 cuuucCCGA-AGGGA-AACAUc | || ||||| ||||| caccaGCCUGUCCCUGUUGUAa 2 16 514 535 [hg19:3:52435769-52435790:-] 0.5598 122 0 -12.36 -0.1028 MIMAT0002860 hsa-miR-516b* 8314 BAP1 ugGGA-GACUUUCCUUCGu ||| :|| |||||||| ucCCUGUUGUAAGGAAGCc 2 17 524 542 [hg19:3:52435762-52435780:-] 0.5872 159 7 -21.34 -0.2607 MIMAT0002860 hsa-miR-516b* 8314 BAP1 ugggaGACUUUCCUUCGu || | ||||||| gguugCUUAUAGGAAGCu 2 14 902 919 [hg19:3:52435385-52435402:-] 0.6279 149 7 -12.18 -0.4572 MIMAT0006778 hsa-miR-516a-3p 8314 BAP1 ugGGA-GACUUUCCUUCGu ||| :|| |||||||| ucCCUGUUGUAAGGAAGCc 2 17 524 542 [hg19:3:52435762-52435780:-] 0.5872 159 7 -21.34 -0.2607 MIMAT0006778 hsa-miR-516a-3p 8314 BAP1 ugggaGACUUUCCUUCGu || | ||||||| gguugCUUAUAGGAAGCu 2 14 902 919 [hg19:3:52435385-52435402:-] 0.6279 149 7 -12.18 -0.4572 MIMAT0004776 hsa-miR-505* 8314 BAP1 ugUAGUUAUGAAGGACCGAGGg ||| || :|||: |||||| acAUCUAUUUUUCUGGGCUCCa 2 21 322 343 [hg19:3:52435961-52435982:-] 0.7109 144 6 -24.21 -0.1582 MIMAT0002877 hsa-miR-513a-5p 8314 BAP1 uacuGUGGAGGGACACUu || : ||||||| uguuCAGUGGCCUGUGAa 2 15 684 701 [hg19:3:52435603-52435620:-] 0.5604 142 7 -15.64 -0.3632 MIMAT0004778 hsa-miR-508-5p 8314 BAP1 guacUCACUGCGGGAGACCUCAu :| |:| | |||||||| cucaGGAGGCAGCAUCUGGAGUu 2 20 197 219 [hg19:3:52436085-52436107:-] 0.6177 155 7 -22.10 -0.2631 MIMAT0002882 hsa-miR-510 8314 BAP1 cacuaacggUGAGAGGACUCau | ||||||||| ucuccuaagAAUCUCCUGAG-- 3 14 1258 1277 [hg19:3:52435027-52435046:-] 0.5926 137 0 -17.43 -0.1687 MIMAT0003219 hsa-miR-555 8314 BAP1 uaGUCUCCAAGUCGAA-UGGGa | || | |||||| |||| ggCUGA-GCACAGCUUGACCCc 2 20 1197 1217 [hg19:3:52435087-52435107:-] 0.5926 121 0 -19.31 -0.1990 MIMAT0004796 hsa-miR-576-3p 8314 BAP1 cuaagguuaaaaaggUGUAGAa |||||| uuuuaccuaucagagACAUCUa 2 8 307 328 [hg19:3:52435976-52435997:-] 0.7341 120 6 -7.58 -0.2022 MIMAT0003242 hsa-miR-577 8314 BAP1 guccaugguuauaAAAUAGAu ||||||| ccaagcaggccccUUUAUCUg 2 9 1127 1147 [hg19:3:52435157-52435177:-] 0.5926 140 7 -14.20 -0.1343 MIMAT0004802 hsa-miR-593 8314 BAP1 ucuuugGGGUCGUCUCUGu ||:| ||||||| auuuuaCCUAUCAGAGACa 2 14 306 324 [hg19:3:52435980-52435998:-] 0.7341 153 7 -19.62 -1.2916 MIMAT0004802 hsa-miR-593 8314 BAP1 ucuuugggGUCGUCUCUGu :||||||||| cucaggggUAGCAGAGACa 2 12 882 900 [hg19:3:52435404-52435422:-] 0.6279 151 7 -21.16 -0.4136 MIMAT0003300 hsa-miR-631 8314 BAP1 cgACUCCAGACC--CGGUCCAGa || || || |||||||| ccUGUUGUAAGGAAGCCAGGUCu 2 20 526 548 [hg19:3:52435756-52435778:-] 0.5872 150 7 -25.16 -0.3272 MIMAT0003310 hsa-miR-640 8314 BAP1 ucuccguccaAGGACCUAGUa | |||||||| ccccuguaaaUACUGGAUCAa 2 12 1223 1243 [hg19:3:52435061-52435081:-] 0.5926 147 7 -13.22 -0.9446 MIMAT0003321 hsa-miR-651 8314 BAP1 guuUUCAGUUCGAAUAGGAUUu :| | || | | |||||| aauGAAUAAAAC-UCUCCUAAg 2 20 1246 1266 [hg19:3:52435038-52435058:-] 0.5926 121 6 -8.33 -0.1605 MIMAT0004813 hsa-miR-411* 8314 BAP1 ccaaucaccUGGCACAA-UGUAu ||| |||| |||| caacaugccACCAUGUUGACAUa 2 14 347 369 [hg19:3:52435935-52435957:-] 0.6575 121 0 -11.38 -0.7090 MIMAT0004814 hsa-miR-654-3p 8314 BAP1 uuccacUACC--AGUCGUCU-GUAu |||| | |||||| ||| gaucccAUGGCCUGAGCAGAGCAUg 2 17 652 676 [hg19:3:52435628-52435652:-] 0.5604 123 0 -15.73 -0.1241 MIMAT0004814 hsa-miR-654-3p 8314 BAP1 uuccacuaccagucgUCUGUAu |||||| uauuuuaccuaucagAGACAUc 2 8 305 326 [hg19:3:52435978-52435999:-] 0.7341 120 6 -11.55 -0.1891 MIMAT0005794 hsa-miR-1296 8314 BAP1 ccucuacCUCGGUCCCGGGAUu | |::: ||||||| gccuucaGUGUUGUGGCCCUAg 2 16 767 788 [hg19:3:52435516-52435537:-] 0.6130 147 7 -18.02 -0.1736 MIMAT0005797 hsa-miR-1301 8314 BAP1 cuUCAGUGAGGGUCCGUCGA-CGUu :||::||: :||| |||| ||| agGGUUGCUUAUAGGAAGCUGGCAc 2 23 900 924 [hg19:3:52435380-52435404:-] 0.6279 138 0 -19.91 -0.4939 MIMAT0003886 hsa-miR-769-5p 8314 BAP1 ucgaguCUUGGGUCUCCAGAGu |::|:| ||||||| uaaauuGGGCUC-UAGGUCUCu 2 17 798 818 [hg19:3:52435486-52435506:-] 0.6130 146 7 -18.05 -0.3630 MIMAT0003888 hsa-miR-766 8314 BAP1 cgacuccgacacccCGACCUCa ||||||| acugaauagucccaGCUGGAGa 2 9 90 111 [hg19:3:52436193-52436214:-] 0.6215 140 7 -17.45 -0.5100 MIMAT0010313 hsa-miR-762 8314 BAP1 cgagcCGGGGCCGGGGUCGGGg |||:| | :||||||| gaagaGCCUCUG-UCCAGCCCc 2 18 840 860 [hg19:3:52435444-52435464:-] 0.6205 155 7 -28.65 -0.3693 MIMAT0005800 hsa-miR-1298 8314 BAP1 augUA-GACCUGUCGGCUUACUu || |||||: :|||||| uaaAUACUGGAUCAAUGAAUGAa 2 20 1229 1251 [hg19:3:52435053-52435075:-] 0.5926 142 6 -20.39 -0.1165 MIMAT0004915 hsa-miR-220c 8314 BAP1 ucaGAAGUGUUGUCGGGACACa | |:: |:| ||||||| accCGUUGGAGC--CCCUGUGu 2 20 1002 1021 [hg19:3:52435283-52435302:-] 0.6279 144 7 -17.71 -0.1230 MIMAT0004952 hsa-miR-665 8314 BAP1 uccccGGAGUC--GGAGGACca ||| || :|||||| acucuCCUAAGAAUCUCCUGag 3 16 1256 1277 [hg19:3:52435027-52435048:-] 0.5926 130 0 -17.18 -0.1736 MIMAT0005588 hsa-miR-1233 8314 BAP1 gaCGCCCUCCUGUCCCGAGu || |: :||||||| uaGCAAGGUUCUAGGGCUCu 2 19 745 764 [hg19:3:52435540-52435559:-] 0.5867 142 7 -19.22 -0.2902 MIMAT0005865 hsa-miR-1202 8314 BAP1 gaggGGGUG-ACGUCGACCGUg |::|: | |||||||| guugCUUAUAGGAAGCUGGCAc 2 18 903 924 [hg19:3:52435380-52435401:-] 0.6279 148 7 -21.89 -0.4949 MIMAT0005865 hsa-miR-1202 8314 BAP1 gagggggugacguCGACCGUg ||||||| cugagugggggguGCUGGCAa 2 9 1158 1178 [hg19:3:52435126-52435146:-] 0.5926 140 7 -13.75 -0.3331 MIMAT0005871 hsa-miR-1207-5p 8314 BAP1 ggGGAG-GGUC----GGAGGGACGGu |||| |||| |:|||||||| gcCCUCACCAGGGUCCUUCCCUGCCc 2 20 42 67 [hg19:3:52436237-52436262:-] 0.6341 161 7 -37.21 -0.1319 MIMAT0005878 hsa-miR-1287 8314 BAP1 cuGAGCUUGGU-GACUAGG-UCGu :|:||| | |||||| ||| gcUUUGAAAAAGGUGAUCCAAGCa 2 21 1110 1133 [hg19:3:52435171-52435194:-] 0.6066 123 0 -20.48 -0.2609 MIMAT0005890 hsa-miR-1302 8314 BAP1 aaaUCGUAUU--CAUA-CAGGGUu ||:|| | | || |||||| cccAGUAUUACUGAAUAGUCCCAg 2 19 81 104 [hg19:3:52436200-52436223:-] 0.6215 121 6 -14.73 -0.4145 MIMAT0005904 hsa-miR-1253 8314 BAP1 acguccgacuagaAGAAGAGa ||||||| uaaggaagccaggUCUUCUCu 2 9 533 553 [hg19:3:52435751-52435771:-] 0.5872 140 7 -15.45 -0.1371 MIMAT0005909 hsa-miR-1258 8314 BAP1 aaggugcuggauuAGGAUUga |||||| augaauaaaacucUCCUAAga 3 9 1247 1267 [hg19:3:52435037-52435057:-] 0.5926 120 0 -7.33 -0.1114 MIMAT0005920 hsa-miR-1266 8314 BAP1 ucggGACAAGAUGUC----GGGACUCc || | ||| || :|||||| aaaaCUCUCCUA-AGAAUCUCCUGAG- 2 20 1253 1277 [hg19:3:52435027-52435051:-] 0.5926 128 6 -16.00 -0.2076 MIMAT0005941 hsa-miR-1284 8314 BAP1 cuUUUCGGUCCCAGAC--AUAUCu |:|| |||||| || ||||| gcAGAGACAGGGU-UGCUUAUAGg 2 21 892 914 [hg19:3:52435390-52435412:-] 0.6279 122 0 -20.94 -0.1995 MIMAT0005944 hsa-miR-1252 8314 BAP1 auUUACUUAAGUUAAAGGAAGa || |: || ||||||| ggAACCAGGCCACAUUCCUUCc 2 21 133 154 [hg19:3:52436150-52436171:-] 0.5492 148 7 -10.07 -0.1032 MIMAT0005949 hsa-miR-664 8314 BAP1 acauccgaccCCUAUUUACUUAu |||| ||||||| uguaaauacuGGAUCAAUGAAUg 2 14 1227 1249 [hg19:3:52435055-52435077:-] 0.5926 157 7 -13.86 -0.5424 MIMAT0005954 hsa-miR-720 8314 BAP1 accUCCGGGGUCGCUCu :|| | ||||||| guuGGGGCACAGCGAGg 2 15 217 233 [hg19:3:52436071-52436087:-] 0.6177 150 7 -24.68 -0.1923 MIMAT0006765 hsa-miR-1825 8314 BAP1 ccucUCCUCC--CGU-GACCu |||||| ||| |||| gcucAGGAGGCAGCAUCUGGa 2 15 196 216 [hg19:3:52436088-52436108:-] 0.5835 121 0 -21.32 -0.1745 MIMAT0007882 hsa-miR-1909* 8314 BAP1 gucccgucCGUGGCCGUGAGu ||| ||||||| cagccucuGCA-AGGCACUCa 2 14 956 975 [hg19:3:52435329-52435348:-] 0.6279 143 7 -20.01 -0.5848 MIMAT0007890 hsa-miR-1914* 8314 BAP1 ggaggGUCACGCCCUGGGGAGg || || |||||||| cugagCACAGCUUGACCCCUCu 2 18 1199 1220 [hg19:3:52435084-52435105:-] 0.5926 153 7 -21.15 -0.1936 MIMAT0007892 hsa-miR-1915 8314 BAP1 gggcggcgcagCGGGACCCc |||||||| ggagaguccagGCCCUGGGa 2 10 107 126 [hg19:3:52436178-52436197:-] 0.5883 145 7 -19.61 -0.1239 MIMAT0009447 hsa-miR-1972 8314 BAP1 acucggUGACACG-GACCGGACu ||||| | ||||||| gugggaACUGUUCAGUGGCCUGu 2 17 676 698 [hg19:3:52435606-52435628:-] 0.5604 155 7 -26.10 -0.2034 MIMAT0009447 hsa-miR-1972 8314 BAP1 acUCGGUGAC---ACGG-ACCGGACu :||::||| | || ||||||| caGGCUGCUGGGAUCCCAUGGCCUGa 2 21 641 666 [hg19:3:52435638-52435663:-] 0.5604 154 7 -27.36 -0.1852 MIMAT0009454 hsa-miR-1979 8314 BAP1 aucaGUUCACUUCGU-CACCCUc ::|| :|||| |||||| ggccUGAGCAGAGCAUGUGGGAa 2 19 660 682 [hg19:3:52435622-52435644:-] 0.5604 126 6 -16.99 -0.2414 MIMAT0011157 hsa-miR-2114* 8314 BAP1 uuCAGGGA--ACGAACUCCGAGc |||||| ||||||||||| cuGUCCCUGGCGCUUGAGGCUCa 2 20 817 839 [hg19:3:52435465-52435487:-] 0.6130 174 7 -32.57 -0.3336 MIMAT0011778 hsa-miR-2278 8314 BAP1 ggUCCGUUGUG-UGUGACGAGAg |||| :: | | |||||||| ccAGGCUGUUCAAGACUGCUCUc 2 21 720 742 [hg19:3:52435562-52435584:-] 0.5604 159 7 -29.90 -0.3598 MIMAT0012734 hsa-miR-711 8314 BAP1 gaaUGCAGAGAGGGACCC-AGGg |: | |:|::||||| ||| gacAUCUAUUUUUCUGGGCUCCa 2 20 321 343 [hg19:3:52435961-52435983:-] 0.7109 127 0 -22.47 -1.1081 MIMAT0013802 hsa-miR-2861 8314 BAP1 ggcggguggcGGUCCGGGg |||||||| gcuggagaguCCAGGCCCu 2 10 104 122 [hg19:3:52436182-52436200:-] 0.5883 145 7 -21.47 -0.1269 MIMAT0013802 hsa-miR-2861 8314 BAP1 ggcggguggcGGUCCGGGg |||||||| ccucuggagcCCAGGCCCc 2 10 1063 1081 [hg19:3:52435223-52435241:-] 0.6279 145 7 -25.85 -0.1363 MIMAT0013802 hsa-miR-2861 8314 BAP1 ggcggguggcgGUCCGGGg ||||||| ggugauccaagCAGGCCCc 2 9 1121 1139 [hg19:3:52435165-52435183:-] 0.5926 140 7 -24.78 -0.2195 MIMAT0014983 hsa-miR-3121 8314 BAP1 acaggaaacggaUG-AGAUAAAu || ||||||| uaccuaucagagACAUCUAUUUu 2 11 310 332 [hg19:3:52435972-52435994:-] 0.7341 141 7 -10.68 -0.9390 MIMAT0014988 hsa-miR-3125 8314 BAP1 agAGAGGUGUCGAAGGAGAu ||||: || ||||||| ucUCUCUUCA--UUCCUCUu 2 19 549 566 [hg19:3:52435738-52435755:-] 0.5872 155 7 -20.07 -0.3992 MIMAT0015377 hsa-miR-3126-3p 8314 BAP1 agacacACUGCCUACGGUCUAc ||:| |||||||| gccccaUGGCCUCUGCCAGAUg 2 17 1088 1109 [hg19:3:52435195-52435216:-] 0.6243 152 7 -19.88 -0.1673 MIMAT0014990 hsa-miR-3127 8314 BAP1 gaaggguaaGGUGUUCGGGACUa |::| :||||||| ------ggaCUGCUGGCCCUGAc 2 15 1 17 [hg19:3:52436287-52436303:-] 0.6421 150 7 -17.01 -0.2832 MIMAT0015019 hsa-miR-3147 8314 BAP1 agUGUGGGAGGAGUGA--CG-GGUUGg |||:|: ::|: || || ||||| agACAUCUAUUUUUCUGGGCUCCAACc 2 23 320 346 [hg19:3:52435958-52435984:-] 0.7109 125 0 -23.29 -0.6147 MIMAT0015024 hsa-miR-3151 8314 BAP1 uggaCUAGG--GUAACGGGGUGg |:||| | |||||||| ccagGGUCCUUCCCUGCCCCACu 2 18 49 71 [hg19:3:52436233-52436255:-] 0.6215 152 7 -27.76 -0.4658 MIMAT0015034 hsa-miR-3160 8314 BAP1 accCGAAAGAUCAGAGUCGAGa ||| | |||||||| gaaGCUGGCACCACUCAGCUCu 2 20 914 935 [hg19:3:52435369-52435390:-] 0.6279 147 7 -19.90 -0.2398 MIMAT0015036 hsa-miR-3162 8314 BAP1 gaGGGGUGGGAAG-AUGAG-GGAUu ||: ||: | | | ||| |||| uaCCUGACUAUGCUUUCUCUCCUAg 2 22 376 400 [hg19:3:52435904-52435928:-] 0.5798 120 0 -20.73 -0.1548 MIMAT0001630 hsa-miR-323b-5p 8314 BAP1 acgcuugagUGGUGCCUGUUGGa |:|| ||||||| gacagcaggAUCA-AGACAACCc 2 15 984 1005 [hg19:3:52435299-52435320:-] 0.6279 144 7 -16.08 -0.2463 MIMAT0015064 hsa-miR-3184 8314 BAP1 uuUUCGAGCCAGACUCCGGGGAGu |: ||| ||| | ||||||| agAGCCUCUGUC-CA-GCCCCUCa 2 23 842 863 [hg19:3:52435441-52435462:-] 0.6279 154 7 -25.49 -0.6565 MIMAT0015064 hsa-miR-3184 8314 BAP1 uuuUCGAGCC--AGACUCCGGG-GAGu :|| | | |||| |||| ||| gcuGGCCCUGACUCUGCAGCCCACUCu 2 22 6 32 [hg19:3:52436272-52436298:-] 0.6421 120 0 -18.82 -0.1432 MIMAT0015065 hsa-miR-3185 8314 BAP1 ggCGUCUGGCUGGCGGA-AGAAGa | || | |::| :|| ||||| agGAAGCCAGGUCUUCUCUCUUCa 2 22 535 558 [hg19:3:52435746-52435769:-] 0.5872 125 0 -14.66 -0.6462 MIMAT0015085 hsa-miR-3200 8314 BAP1 guCUGGACUCAUCGCGUUCCAc | :|| || ||||||| cuGCUCUCCAUA--GCAAGGUu 2 21 735 754 [hg19:3:52435550-52435569:-] 0.5604 141 7 -10.77 -0.5503 MIMAT0016856 hsa-miR-4303 8314 BAP1 gacaGGAGU-CGAGUCUu |:| | ||||||| ggcgCUUGAGGCUCAGAa 2 14 825 842 [hg19:3:52435462-52435479:-] 0.6130 144 7 -15.91 -0.2051 MIMAT0016858 hsa-miR-4306 8314 BAP1 augACGGAAAGAGAGGu || |||||||||| cuaUG-CUUUCUCUCCu 2 15 383 398 [hg19:3:52435906-52435921:-] 0.6273 156 7 -17.57 -0.5411 MIMAT0016858 hsa-miR-4306 8314 BAP1 augacggaaaGAGAGGu |||||| augaauaaaaCUCUCCu 2 8 1247 1263 [hg19:3:52435041-52435057:-] 0.5926 120 6 -10.75 -0.1683 MIMAT0016870 hsa-miR-4319 8314 BAP1 caccgaaacGAGUCCCu ||||||| agugccaaaCUCAGGGa 2 9 572 588 [hg19:3:52435716-52435732:-] 0.5604 140 7 -17.58 -0.2942 MIMAT0016870 hsa-miR-4319 8314 BAP1 caccgaaacGAGUCCCu ||||||| ugucucccuCUCAGGGg 2 9 873 889 [hg19:3:52435415-52435431:-] 0.6279 140 7 -15.63 -0.1075 MIMAT0016870 hsa-miR-4319 8314 BAP1 caccgaaacGAGUCCCu ||||||| ugcaaggcaCUCAGGGu 2 9 963 979 [hg19:3:52435325-52435341:-] 0.6279 140 7 -17.86 -0.1767 MIMAT0016880 hsa-miR-4259 8314 BAP1 aggacugGGGAUCUGGGUUGAc || :| ||||||| uaucaugCCACGGUCCCAACUa 2 16 429 450 [hg19:3:52435854-52435875:-] 0.5323 147 7 -16.31 -0.1956 MIMAT0016886 hsa-miR-4252 8314 BAP1 accacGACUGAGUCACCGg ||| :|||||||| gggaaCUG-UUCAGUGGCc 2 15 678 695 [hg19:3:52435609-52435626:-] 0.5604 152 7 -26.05 -0.2256 MIMAT0016890 hsa-miR-4261 8314 BAP1 accCAGGGACA-AAGGa | |||||| |||| ggaGCCCCUGUGUUCCa 2 14 1009 1025 [hg19:3:52435279-52435295:-] 0.6279 121 0 -16.91 -0.2876 MIMAT0016894 hsa-miR-4262 8314 BAP1 guccaucagACUUACag |||||| cuggaucaaUGAAUGaa 3 9 1235 1251 [hg19:3:52435053-52435069:-] 0.5926 120 0 -7.47 -0.1084 MIMAT0016899 hsa-miR-4264 8314 BAP1 uuacUGGUACUGACUCa |: :|||||||| guacAUAGUGACUGAGu 2 14 1147 1163 [hg19:3:52435141-52435157:-] 0.5926 149 7 -16.42 -0.1871 MIMAT0016901 hsa-miR-4271 8314 BAP1 gggguggaaaaGAAGGGGg ||||||| ucccugccccaCUUCCCCu 2 9 59 77 [hg19:3:52436227-52436245:-] 0.6215 140 7 -25.55 -0.5052 MIMAT0016906 hsa-miR-4274 8314 BAP1 gucccccuccCUGACGAc ||||||| ggcuguucaaGACUGCUc 2 9 723 740 [hg19:3:52435564-52435581:-] 0.5604 140 7 -10.22 -0.3139 MIMAT0016914 hsa-miR-4283 8314 BAP1 uuUGAGCGA-CUCGGGGu || ||:| ||||||| caACCCGUUGGAGCCCCu 2 16 1000 1017 [hg19:3:52435287-52435304:-] 0.6279 154 7 -21.98 -0.1051 MIMAT0016916 hsa-miR-4286 8314 BAP1 ccaugguccUCACCCCa ||||||| gggugucccAGUGGGGu 2 9 615 631 [hg19:3:52435673-52435689:-] 0.5604 140 7 -22.99 -0.1062 MIMAT0000080 hsa-miR-24 8314 BAP1 gaCAAGGACGACUUGACU-CGGu ||||| | || |||| ||| guGUUCCAGAGGACCUGAUGCCa 2 21 1018 1040 [hg19:3:52435264-52435286:-] 0.6279 132 0 -24.48 -0.1764 MIMAT0000095 hsa-miR-96 8314 BAP1 ucguuuuuacacgaUCACGGUUu |||||||| auuccucuuaggagAGUGCCAAa 2 10 558 580 [hg19:3:52435724-52435746:-] 0.5738 145 7 -18.91 -0.7078 MIMAT0000252 hsa-miR-7 8314 BAP1 uguuguuuuagUGAUCAGAAGGu ||| ||||||| guggccugugaACU-GUCUUCCu 2 13 690 711 [hg19:3:52435593-52435614:-] 0.5604 146 7 -14.57 -0.5656 MIMAT0000252 hsa-miR-7 8314 BAP1 ugUUG-UUUUAGUGA-UC-AGAAGGu |:| :: | |||| || |||||| gaAGCUGGCACCACUCAGCUCUUCCu 2 22 914 939 [hg19:3:52435365-52435390:-] 0.6279 123 6 -14.97 -0.1921 MIMAT0000253 hsa-miR-10a 8314 BAP1 guguuuaagccuagaUGUCCCAu ||||||| ucagggguagcagagACAGGGUu 2 9 883 905 [hg19:3:52435399-52435421:-] 0.6279 140 7 -17.22 -0.1568 MIMAT0000254 hsa-miR-10b 8314 BAP1 guguuuaagccaagaUGUCCCAu ||||||| ucagggguagcagagACAGGGUu 2 9 883 905 [hg19:3:52435399-52435421:-] 0.6279 140 7 -15.70 -0.1583 MIMAT0000256 hsa-miR-181a 8314 BAP1 ugaGUGGCUGUCGCAACUUACaa :||:|: | | |||||| aaaUACUGG-AUCAAUGAAUGaa 3 21 1230 1251 [hg19:3:52435053-52435074:-] 0.5926 130 0 -12.84 -0.1095 MIMAT0000257 hsa-miR-181b 8314 BAP1 uggGUGGCUGUCGUUACUUACaa :||:|: | ||||||||| aaaUACUGG-AUCAAUGAAUGaa 3 21 1230 1251 [hg19:3:52435053-52435074:-] 0.5926 146 0 -19.37 -0.1095 MIMAT0000258 hsa-miR-181c 8314 BAP1 ugaGUGGCUGUCCAACUUACaa :||:|: |||||| aaaUACUGGAUCAAUGAAUGaa 3 20 1230 1251 [hg19:3:52435053-52435074:-] 0.5926 123 0 -13.42 -0.1095 MIMAT0000318 hsa-miR-200b 8314 BAP1 aguaGUAAUGGUCCGUCAUAAu | || || ||||||| ucccCUUUUCC---CAGUAUUa 2 19 72 90 [hg19:3:52436214-52436232:-] 0.6215 142 7 -9.29 -0.4391 MIMAT0000318 hsa-miR-200b 8314 BAP1 aguaguaaUGGUCCGUCAUAAu :|| ||||||| ucuguccaGCCCCUCAGUAUUa 2 15 848 869 [hg19:3:52435435-52435456:-] 0.6279 142 7 -13.72 -0.5062 MIMAT0000423 hsa-miR-125b 8314 BAP1 aguguucaaUCCCAGAGUCCCu ||| ||||||| gccucugcaAGGCACUCAGGGu 2 14 958 979 [hg19:3:52435325-52435346:-] 0.6279 149 7 -18.81 -0.1784 MIMAT0000423 hsa-miR-125b 8314 BAP1 aguGUUCAAUCCCAGAGUCCCu || || |||||||| uacCAUGUCUCCCUCUCAGGGg 2 20 868 889 [hg19:3:52435415-52435436:-] 0.6279 147 7 -18.27 -0.1108 MIMAT0000423 hsa-miR-125b 8314 BAP1 aguguucaaucccaGAGUCCCu ||||||| aggagagugccaaaCUCAGGGa 2 9 567 588 [hg19:3:52435716-52435737:-] 0.5604 140 7 -18.84 -0.2993 MIMAT0000432 hsa-miR-141 8314 BAP1 gguAGAAAUGGUCUGUCACAAu |||| :|| ||||||| ggcUCUUCGCC-UUCAGUGUUg 2 20 759 779 [hg19:3:52435525-52435545:-] 0.6130 153 7 -18.90 -0.1700 MIMAT0000443 hsa-miR-125a-5p 8314 BAP1 aguguccaauUUCCCAGAGUCCCu |||| ||||||| cagccucugcAAGGCACUCAGGGu 2 15 956 979 [hg19:3:52435325-52435348:-] 0.6279 154 7 -20.05 -0.1767 MIMAT0000443 hsa-miR-125a-5p 8314 BAP1 aguguccaauuucccAGAGUCCCu |||||||| auuaccaugucucccUCUCAGGGg 2 10 866 889 [hg19:3:52435415-52435438:-] 0.6279 145 7 -17.12 -0.1131 MIMAT0000443 hsa-miR-125a-5p 8314 BAP1 aguguccaauuucccaGAGUCCCu ||||||| uuaggagagugccaaaCUCAGGGa 2 9 565 588 [hg19:3:52435716-52435739:-] 0.5738 140 7 -20.02 -0.3246 MIMAT0000455 hsa-miR-185 8314 BAP1 aguccUUGACG-GAAAGAGAGGu :||| : |||||||||| uaccuGACUAUGCUUUCUCUCCu 2 18 376 398 [hg19:3:52435906-52435928:-] 0.6273 160 7 -20.17 -0.5411 MIMAT0000455 hsa-miR-185 8314 BAP1 aguccuugacggaaaGAGAGGu |||||| aaugaaugaauaaaaCUCUCCu 2 8 1242 1263 [hg19:3:52435041-52435062:-] 0.5926 120 6 -13.54 -0.1683 MIMAT0000617 hsa-miR-200c 8314 BAP1 agguaguaaUGGGCCGUCAUAAu :||| ||||||| cucuguccaGCCCCUCAGUAUUa 2 15 847 869 [hg19:3:52435435-52435457:-] 0.6279 150 7 -18.99 -0.5062 MIMAT0000617 hsa-miR-200c 8314 BAP1 agguaGUAAUGGGCCGUCAUAAu | || :|| ||||||| cuuccCCUUUUCC--CAGUAUUa 2 19 70 90 [hg19:3:52436214-52436234:-] 0.6215 147 7 -13.07 -0.4391 MIMAT0000682 hsa-miR-200a 8314 BAP1 uguAGCAAUGGUCUGUCACAAu || | :|| ||||||| ggcUCUUCGCC-UUCAGUGUUg 2 20 759 779 [hg19:3:52435525-52435545:-] 0.6130 145 7 -15.36 -0.1716 MIMAT0000722 hsa-miR-370 8314 BAP1 ugGUCCAAGGUGGGGUCGUCCg |||| | : ||||||| cuCAGGGUGGGGGACAGCAGGa 2 21 972 993 [hg19:3:52435311-52435332:-] 0.6279 148 7 -22.54 -0.4732 MIMAT0000722 hsa-miR-370 8314 BAP1 ugGUCCAAGGUGGGGUCGUCCg | || | :: ||||||| agCCGGCUGUGGAGCAGCAGGa 2 21 252 273 [hg19:3:52436031-52436052:-] 0.6452 144 7 -19.60 -0.1118 MIMAT0000764 hsa-miR-339-5p 8314 BAP1 gcACUCGAGGACCUC-CUGUCCCu | || : | || ||||||| ucUCAGGGGUAGCAGAGACAGGGu 2 22 881 904 [hg19:3:52435400-52435423:-] 0.6279 144 7 -23.43 -0.3416 MIMAT0001536 hsa-miR-429 8314 BAP1 ugccaAAAUGGUCUGUCAUAAu ||| || ||||||| uccccUUUUCC---CAGUAUUa 2 18 72 90 [hg19:3:52436214-52436232:-] 0.6215 145 7 -10.85 -0.4391 MIMAT0001536 hsa-miR-429 8314 BAP1 ugcCAAAAUGGUCUGUCAUAAu || :|| ||||||| ucuGUCCAGCCCCUCAGUAUUa 2 20 848 869 [hg19:3:52435435-52435456:-] 0.6279 143 7 -14.49 -0.5062 MIMAT0002175 hsa-miR-485-5p 8314 BAP1 cuuAAGUAGUGCCGGUCGGAGa | || : : :||||||| uacUCCAGUUUCCUCAGCCUCu 2 20 942 963 [hg19:3:52435341-52435362:-] 0.6279 143 7 -16.44 -0.4398 MIMAT0002816 hsa-miR-494 8314 BAP1 cuccaAAGGGCACAUAC-AAAGu | ||:| |||| |||| guuccUACCUGACUAUGCUUUCu 2 18 371 393 [hg19:3:52435911-52435933:-] 0.6273 121 0 -11.16 -0.2991 MIMAT0002821 hsa-miR-181d 8314 BAP1 uggGUGGCUGUUGUUACUUACaa :||:|: | ||||||||| aaaUACUGG-AUCAAUGAAUGaa 3 21 1230 1251 [hg19:3:52435053-52435074:-] 0.5926 146 0 -20.08 -0.1084 MIMAT0002875 hsa-miR-504 8314 BAP1 cuaUCUCACGUCUG--GUCCCAGa | :|| | || ||||||| gccACGGUCCCAACUACAGGGUCc 2 20 435 458 [hg19:3:52435846-52435869:-] 0.5323 146 7 -15.16 -0.1144 MIMAT0002876 hsa-miR-505 8314 BAP1 uccUUUGGUCGUUCACAACUGc | :||| || ||||||| aacAUGCCACCA--UGUUGACa 2 20 348 367 [hg19:3:52435937-52435956:-] 0.6575 152 7 -13.02 -0.9687 MIMAT0005796 hsa-miR-1271 8314 BAP1 acucacGAACGAUC-CACGGUUc ||| || ||||||| auuccuCUUAGGAGAGUGCCAAa 2 17 558 580 [hg19:3:52435724-52435746:-] 0.5738 147 7 -14.18 -0.7040 MIMAT0004954 hsa-miR-543 8314 BAP1 uuCUUCACGUG-GCGCUU-ACAAa | || |||: :| ||| |||| gaGCAGAGCAUGUGGGAACUGUUc 2 21 665 688 [hg19:3:52435616-52435639:-] 0.5604 123 0 -13.07 -0.1016

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G018269 BAP1 Homo sapiens 8314

DNA & RNA Element - TargetScan Gene Name UTR Region Start UTR Region End AIR Total Normalized 3P-seq-tags & Pseudocounts Strand hg19_chromosome Genome Start Genome End BAP1; KIAA0272; hucep-6 1 369 100 444.504 - chr3 52435934 52436303 BAP1; KIAA0272; hucep-6 370 375 98.598 444.504 - chr3 52435928 52435934 BAP1; KIAA0272; hucep-6 376 1275 95.475 444.504 - chr3 52435028 52435928 BAP1; KIAA0272; hucep-6 1276 1276 94.35 444.504 - chr3 52435027 52435028 BAP1; KIAA0272; hucep-6 1277 1278 48.324 444.504 - chr3 52435025 52435027 BAP1; KIAA0272; hucep-6 1279 1284 0.01 444.504 - chr3 52435019 52435025