iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

SNP - dbSNP
dbSNP	Type	Alleles	Het	Se(het)	Fxn-class	Gene Name	Assembly	Chr-pos	Sequence	Entrez Gene
rs15038	snp	A/T	0.4278	0.175747	utr-variant-5-prime, upstream-variant-2KB	PHF7, BAP1	GRCh38.p7	3:52411015	GTTTATTTATTTTTT[A/T]TTTTCTCAACAAGCT	8314
rs15213	snp	C/T	0	0	utr-variant-3-prime	BAP1	GRCh38.p7	3:52401150	TGATCCAAGCAGGCC[C/T]CTTTATCTGTACATA	8314
rs123598	snp	A/G	0.0547245	0.156101	utr-variant-3-prime	BAP1	GRCh38.p7	3:52401844	AGGACCCTGTAGTTG[A/G]GACCGTGGCATGATA	8314
rs123602	snp	C/G	0.274661	0.248781	intron-variant	BAP1	GRCh38.p7	3:52408338	TTAAGAGTTCAGTTC[C/G]TTCTGCCAGAGGATT	8314
rs409803	snp	A/G	0.0752113	0.178743	upstream-variant-2KB, intron-variant	PHF7, BAP1	GRCh38.p7	3:52409264	ACAACTGCACAAAAG[A/G]CATTGTGTGACCGGG	8314
rs419604	snp	A/T	0.0543475	0.155628	intron-variant	BAP1	GRCh38.p7	3:52407590	CAGACGAACTTTCTT[A/T]AAAGGCTGGTGGGGG	8314
rs491551	snp	G/T	0.00011783	0.00767471	upstream-variant-2KB, intron-variant	PHF7, BAP1	GRCh38.p7	3:52409670	GTGAGGGCGCAGGGG[G/T]GGGCCGCCACAGCCC	8314
rs498946	snp	C/T	0.393619	0.204631	downstream-variant-500B	BAP1, DNAH1	GRCh38.p7	3:52400951	AGGGCCCTAGGCCCA[C/T]GAGGTCTAGTAAGGC	8314
rs1802229	snp	C/T			utr-variant-3-prime	BAP1	GRCh38.p7	3:52401451	CCTGGCGCTTGAGGC[C/T]CAGAAGAGCCTCTGT	8314
rs3193547	snp	C/T			synonymous-codon	BAP1	GRCh38.p7	3:52405242	CCCATCCCACAGCCC[C/T]CCCAACAAACCCAAG	8314
rs3821840	snp	A/G	0.0174175	0.0916809	intron-variant	BAP1	GRCh38.p7	3:52408189	AAAGGAGCTGAGAAG[A/G]GGAGTTGTCCAGATA	8314
rs9810929	snp	A/C	0	0	intron-variant	BAP1	GRCh38.p7	3:52405487	TGGGAAAAAAGAAGC[A/C]GGaagaaaaaaaaaa	8314
rs9842960	snp	C/T	0.0150606	0.0854603	intron-variant	BAP1	GRCh38.p7	3:52404252	CATGATATAAGCTTA[C/T]GTGCTCAGCCTTACC	8314
rs9848343	snp	C/T	0.00470586	0.0482782	splice-acceptor-variant	BAP1	GRCh38.p7	3:52405295	CCTCCTCTGCACCAT[C/T]TGAGACAGGGCAAGA	8314
rs9848628	snp	C/T	0	0	intron-variant	BAP1	GRCh38.p7	3:52405431	GGGAGTCAGCAAGCT[C/T]TAAGTCATGATCCCG	8314
rs9855479	snp	A/G	0.0298908	0.118541	utr-variant-3-prime	BAP1	GRCh38.p7	3:52401314	GCTGTCCCCCACCCT[A/G]AGTGCCTTGCAGAGG	8314
rs11556195	snp	C/T	0	0	utr-variant-5-prime, upstream-variant-2KB	PHF7, BAP1	GRCh38.p7	3:52410895	CTGGCATCCGCGGGA[C/T]GCTCCTTAAGCCCCT	8314
rs17849500	snp	A/G			synonymous-codon	BAP1	GRCh38.p7	3:52407967	GCCTACCTCAGGGCT[A/G]AAACCCTTGGTGAAG	8314
rs28498805	snp	C/G			utr-variant-5-prime, upstream-variant-2KB	PHF7, BAP1	GRCh38.p7	3:52410627	TTCCCGAAGGTCATA[C/G]TCCGCGTGACCCACC	8314
rs28636773	snp	A/C	0.0134861	0.0810011	utr-variant-5-prime, upstream-variant-2KB	PHF7, BAP1	GRCh38.p7	3:52410609	CGGTAGGCGTCGCCG[A/C]GATTCCCGAAGGTCA	8314
rs28758860	snp	A/C/T	0.0554779	0.157039	downstream-variant-500B	BAP1, DNAH1	GRCh38.p7	3:52400530	TGCATGAGGACCCCT[A/C/T]TGCAGGACTCACTGC	8314
rs28997577	snp	A/G	0.0125153	0.0781089	synonymous-codon	BAP1	GRCh38.p7	3:52405224	CAACAAACCCAAGCT[A/G]GTGGTGAAGCCTCCA	8314
rs34267070	in-del	-/C			splice-acceptor-variant, intron-variant	BAP1	GRCh38.p7	3:52406377	CGTGGTAGGGCTCCC[-/C]TGCAGTCACAGCCGC	8314
rs34526543	in-del	-/C			intron-variant	BAP1	GRCh38.p7	3:52402967	ATGAGCAGCGAGTCC[-/C]ATGCCTATCAAGGCC	8314
rs34712081	snp	A/C	0.0138799	0.0821421	intron-variant	BAP1	GRCh38.p7	3:52407847	ATAAACAATCATTTG[A/C]AAAAGAAACAGCCTA	8314
rs34736117	snp	A/C	0.0120283	0.0766124	synonymous-codon	BAP1	GRCh38.p7	3:52403732	CACAGCCGGACTCCC[A/C]GCCCCGCTGCTAGTC	8314
rs35003777	snp	C/T	0.00234203	0.0341399	synonymous-codon	BAP1	GRCh38.p7	3:52406253	AGAAAGGGCACCTAC[C/T]TGCTGCAGAGCCTCT	8314
rs35006997	in-del	-/G			upstream-variant-2KB, intron-variant	PHF7, BAP1	GRCh38.p7	3:52409673	AGGGCGCAGGGGTGG[-/G]CCGCCACAGCCCCGG	8314
rs35353781	snp	A/T	0.277778	0.248452	missense, splice-donor-variant	BAP1	GRCh38.p7	3:52403181	GGCTCGCCAGGCCTC[A/T]CCATCCCCGTCTTCT	8314
rs35383402	in-del	-/G			upstream-variant-2KB, intron-variant	PHF7, BAP1	GRCh38.p7	3:52409669	GTGAGGGCGCAGGGG[-/G]TGGGCCGCCACAGCC	8314
rs35421595	in-del	-/G			upstream-variant-2KB, intron-variant	PHF7, BAP1	GRCh38.p7	3:52409128	TGCAGGACCACTGGG[-/G]AAAAGACTCTAAGTG	8314
rs35448940	snp	A/G	0.00233733	0.0341057	BAP1	3	allele_origin=G(germline)/A(germline)	3:52403190	GGCCTCACCATCCCC[A/G]TCTTCTCTCTGCTGT	8314
rs35591241	in-del	-/G			frameshift-variant	BAP1	GRCh38.p7	3:52405185	GGAGTGGGGTTGGGG[-/G]TGAACCCCATTGAGG	8314
rs35797935	in-del	-/C			intron-variant	BAP1	GRCh38.p7	3:52407359	AAATGATACTCCCCC[-/C]TACTCCCACCCCACA	8314
rs36036905	in-del	-/T			upstream-variant-2KB	PHF7, BAP1	GRCh38.p7	3:52410397	GGGCGCAGGTGGGGC[-/T]GAGAGGAGGGGCGGG	8314
rs55703252	snp	A/C			intron-variant	BAP1	GRCh38.p7	3:52406806	CTCCAGAGAGTAGAA[A/C]AGGGCAGGCACAGGG	8314
rs56238158	snp	C/T	0.5	0	missense	BAP1	GRCh38.p7	3:52405286	AACCAGCCGCCTCCT[C/T]TGCACCATCTGAGAC	8314
rs56898787	snp	A/C/G	0.0280114	0.114986	utr-variant-3-prime	BAP1	GRCh38.p7	3:52402243	GAAGGACCCTGGTGA[A/C/G]GGCCACACGGCAAGA	8314
rs59676508	snp	C/T			intron-variant	BAP1	GRCh38.p7	3:52405336	GACCTCCAGTAGGAT[C/T]TCCAAGAAAAGCTCA	8314
rs60724458	snp	A/G			intron-variant	BAP1	GRCh38.p7	3:52408147	GCCCATATACATCAA[A/G]AATGGGGATCCAGAG	8314
rs71084182	in-del	-/T	0	0	intron-variant	BAP1	GRCh38.p7	3:52405521	TTTCTCTAGAGGCGG[-/T]TTTTTTTTTTTTTTT	8314
rs71651686	snp	C/T	0.00457174	0.0475917	synonymous-codon	BAP1	GRCh38.p7	3:52405200	GCCTCCAGGCAGCAG[C/T]CTCAATGGGGTTCAC	8314
rs71651687	snp	A/G	1.65056e-05	0.00287272	missense	BAP1	GRCh38.p7	3:52403511	GTGTTGACTGCATAC[A/G]CTACAACCGTGCTGT	8314
rs71651688	snp	C/T	0.0392	0.1344	intron-variant	BAP1	GRCh38.p7	3:52408136	CATTCTTGATGTATA[C/T]GGGCTTGGGGCTTGC	8314
rs75154579	snp	A/T			missense	BAP1	GRCh38.p7	3:52405908	GGCTGTGTTACTCTT[A/T]TCAGCTAACAACAGA	8314
rs77419152	snp	C/G	0.0115144	0.0749975	intron-variant	BAP1	GRCh38.p7	3:52406027	CTACCCATTCACTCA[C/G]AGGGAAATAAAACAC	8314
rs77722216	snp	C/T	0.000412028	0.0143473	synonymous-codon	BAP1	GRCh38.p7	3:52403825	GATGGTGTTGGGCTG[C/T]AGCACTGACAGTTGC	8314
rs77990448	snp	C/G/T	3.3004e-05	0.00406216	intron-variant	BAP1	GRCh38.p7	3:52402574	CTCAGCAGGGCATTC[C/G/T]AGTTAAGACAGCAGC	8314
rs78657948	snp	C/G	0.000798403	0.0199641	intron-variant	BAP1	GRCh38.p7	3:52408402	CCTCCTCCTGTCTTC[C/G]TCCATTTCCACTTCC	8314
rs78939484	snp	C/T	0.000798403	0.0199641	intron-variant, upstream-variant-2KB	PHF7, BAP1	GRCh38.p7	3:52411723	TTCACTTTCAGGGAT[C/T]TCCCCGTTAACCAGT	8314
rs79014342	snp	C/T	0.0142055	0.083072	BAP1	3	allele_origin=T(germline)/C(germline)	3:52403242	TCTCCACTGGGCTGC[C/T]GGACCCCTGGCTGCC	8314
rs111729347	snp	A/C/G	1.65542e-05	0.00287695	intron-variant	BAP1	GRCh38.p7	3:52405946	GCTCAGAGGAGAAAG[A/C/G]GTAGACCCGGGCTTC	8314
rs112026686	snp	A/G	0.0263992	0.111815	utr-variant-3-prime	BAP1	GRCh38.p7	3:52401896	ACAGCTCCTAGGAGA[A/G]AAAGCATAGTCAGGT	8314
rs112184821	snp	C/T			utr-variant-3-prime	BAP1	GRCh38.p7	3:52401649	ATCCCAGCAGCCTGC[C/T]CACCCCAACCCCACT	8314
rs112194064	snp	A/T	0.00835141	0.0640778	intron-variant, upstream-variant-2KB	PHF7, BAP1	GRCh38.p7	3:52411395	GTGTTTTCCTTAAGG[A/T]AGAAGCCATCAGATG	8314
rs112194987	snp	C/T	0.5	0	splice-acceptor-variant	BAP1	GRCh38.p7	3:52405296	CTCCTCTGCACCATC[C/T]GAGACAGGGCAAGAA	8314
rs112270860	snp	A/G	0.5	0	intron-variant	BAP1	GRCh38.p7	3:52408268	ACTGGATATCTGAGG[A/G]CACAGAGAGTGGACT	8314
rs112613161	snp	A/C	1.64885e-05	0.00287123	upstream-variant-2KB, intron-variant	PHF7, BAP1	GRCh38.p7	3:52409651	GAAGGACAGCCCCTG[A/C]TGAGTGAGGGCGCAG	8314
rs113011835	snp	A/G	0.5	0	intron-variant	BAP1	GRCh38.p7	3:52406123	TGGGGGCAAAGAAAA[A/G]ATGTGGTTAGCTGAA	8314
rs113406009	snp	C/G			splice-donor-variant, intron-variant, utr-variant-5-prime, upstream-variant-2KB	PHF7, BAP1	GRCh38.p7	3:52411248	AACTGAAGTTTCAAG[C/G]TTTTATGTCTATTGC	8314
rs113802540	snp	A/G	0.5	0	missense	BAP1	GRCh38.p7	3:52407981	TGAAACCCTTGGTGA[A/G]GTCCTTCATGCGACT	8314
rs114897676	snp	C/T	0.030665	0.119967	intron-variant	BAP1	GRCh38.p7	3:52402480	GGCCAGGAGCTGAGG[C/T]TCTCATGGCCCTCCC	8314
rs115109161	snp	G/T	0.000873873	0.0208848	missense	BAP1	GRCh38.p7	3:52403877	GCCCCTGGCTTCCCT[G/T]TTCCCTTCCCCTTAT	8314
rs116234404	snp	A/G	0.0162398	0.0886349	upstream-variant-2KB, intron-variant	PHF7, BAP1	GRCh38.p7	3:52408708	TGCGTCATCACTCAG[A/G]TGTCCTTGCTGTGAT	8314
rs116604051	snp	A/G	1.64765e-05	0.00287019	synonymous-codon, intron-variant	BAP1	GRCh38.p7	3:52403171	CCCACTCAAGGGCTC[A/G]CCAGGCCTCACCATC	8314
rs117382883	snp	C/T	0.00273932	0.0369074	synonymous-codon	BAP1	GRCh38.p7	3:52408045	CAGGAGCACGCTCAG[C/T]AAGGCATGAGTTGCA	8314
rs138030353	snp	C/T	1.65318e-05	0.002875	missense	BAP1	GRCh38.p7	3:52403707	AGGGCTGCGAGTGTG[C/T]GGGCACTGCCACAGC	8314
rs138119961	snp	A/T	0.00119737	0.0244387	upstream-variant-2KB, intron-variant	PHF7, BAP1	GRCh38.p7	3:52409471	TAGGGTTCCTGGCAC[A/T]GTCTTCCCTAAGGGG	8314
rs138166986	snp	C/T	0.000377965	0.0137419	intron-variant	BAP1	GRCh38.p7	3:52408122	CAGCACCCCTCACTG[C/T]AAGCCCCAAGCCCAT	8314
rs138180791	snp	A/G	8.26726e-05	0.0064288	synonymous-codon, intron-variant	BAP1	GRCh38.p7	3:52406331	CTTGATCCTGCGGTC[A/G]GGCACCACTGCCATC	8314
rs138710878	snp	C/T	0.000399281	0.0141238	intron-variant	BAP1	GRCh38.p7	3:52405974	TTCTACCTTAAATAG[C/T]TAAGGGCTGAGGACC	8314
rs138884499	snp	A/T	0.000399281	0.0141238	upstream-variant-2KB, intron-variant	PHF7, BAP1	GRCh38.p7	3:52408843	GTGATGCTCCAGGAG[A/T]CCACCCAGTCTCCTT	8314
rs139307137	snp	C/T	0.00458636	0.047667	utr-variant-3-prime	BAP1	GRCh38.p7	3:52402251	CTGGTGAGGGCCACA[C/T]GGCAAGAGTGGGCTG	8314
rs139414598	snp	A/T	0.0126813	0.0786119	intron-variant	BAP1	GRCh38.p7	3:52406402	AGCCGCAGCCGTGAG[A/T]GCAGCTCCCGCCCCG	8314
rs139444550	snp	A/G	0.00478085	0.0486577	utr-variant-5-prime, upstream-variant-2KB	PHF7, BAP1	GRCh38.p7	3:52411081	ATCGTTTCGAGGGGC[A/G]TCCGCCGGGTTAGGA	8314
rs139565574	snp	A/T	0.000399281	0.0141238	utr-variant-5-prime, intron-variant, upstream-variant-2KB	PHF7, BAP1	GRCh38.p7	3:52411209	AATCCTACTCAAGGA[A/T]CGTCTTGGCCCAGCG	8314
rs139971418	snp	A/G	0.0209421	0.100162	intron-variant	BAP1	GRCh38.p7	3:52402540	AGAGGCCAGGGGAGG[A/G]GAGCTGAAGGACACG	8314
rs140641333	snp	A/G	0.00090495	0.0212522	synonymous-codon	BAP1	GRCh38.p7	3:52408039	GCAGTTCAGGAGCAC[A/G]CTCAGCAAGGCATGA	8314
rs140998455	snp	C/G	0.000132813	0.00814794	missense	BAP1	GRCh38.p7	3:52404491	CACGTCATCCTCCTC[C/G]TCATCCTCATAGTCA	8314
rs141453056	snp	C/T	0.000153988	0.00877328	missense	BAP1	GRCh38.p7	3:52403670	GAGGCCGTGTCTGTA[C/T]TCTCATTGCTGGGGG	8314
rs141695404	snp	A/G	0.00398564	0.0444627	upstream-variant-2KB, intron-variant	PHF7, BAP1	GRCh38.p7	3:52408884	TAGTTCTGGGTAAGA[A/G]AAGAAAAGCTGGAAC	8314
rs141740852	in-del	-/C			intron-variant	BAP1	GRCh38.p7	3:52407044	TGGTGTAGGGTGAAA[-/C]CCCAGCCAGAGCCGG	8314
rs141765555	snp	C/T	0.00199481	0.0315187	intron-variant	BAP1	GRCh38.p7	3:52406184	ATCAGAGACAAATGC[C/T]GTGGGGGAAGGGAGG	8314
rs141802003	snp	G/T	3.295e-05	0.00405881	upstream-variant-2KB, intron-variant	PHF7, BAP1	GRCh38.p7	3:52409623	CCTGCGATGAGGAAA[G/T]GAAAGCAGTAGGGAA	8314
rs141917607	snp	C/T	0.0166325	0.0896639	intron-variant	BAP1	GRCh38.p7	3:52405695	AAAAGACTTTCCCTG[C/T]TTAGGCCTCCCATGT	8314
rs142059527	snp	C/T	0.000131841	0.00811808	missense	BAP1	GRCh38.p7	3:52403227	CTTCCACGACCTCCT[C/T]CTCCACTGGGCTGCT	8314
rs142131779	snp	C/G	3.29541e-05	0.00405906	intron-variant	BAP1	GRCh38.p7	3:52407328	GGGCCTGGGGAAAAA[C/G]AGAGTCAGGGCCCAA	8314
rs142506621	snp	A/G	0.000798403	0.0199641	intron-variant	BAP1	GRCh38.p7	3:52407654	CTGTGCTGGCCTTGC[A/G]TGGTAATTAGTGGAC	8314
rs142522470	snp	C/T	0.000798403	0.0199641	intron-variant	BAP1	GRCh38.p7	3:52403357	TTTGTGGTCACTTGG[C/T]CACTTCCCTCCTCCC	8314
rs142622446	snp	A/C/G	0.000941215	0.0216733	intron-variant	BAP1	GRCh38.p7	3:52405059	AAATTGCCTGTTGCA[A/C/G]CCTCTCAAGAGAATC	8314
rs142887785	snp	C/T	0.00199807	0.0315443	missense	BAP1	GRCh38.p7	3:52405195	TTGGGGTGAACCCCA[C/T]TGAGGCTGCTGCCTG	8314
rs143014714	snp	A/T	0.00318978	0.0398085	utr-variant-3-prime	BAP1	GRCh38.p7	3:52401903	CTAGGAGAGAAAGCA[A/T]AGTCAGGTAGGAACT	8314
rs143273211	snp	A/C	0.00406396	0.0448939	upstream-variant-2KB, intron-variant	PHF7, BAP1	GRCh38.p7	3:52408654	CAAAGGGGAGAAGAC[A/C]ATCAGCATTCCCTTC	8314
rs143659795	snp	A/G	0.00133574	0.0258086	synonymous-codon	BAP1	GRCh38.p7	3:52405266	GGATGGGGCTTGTGC[A/G]CATGAACCAGCCGCC	8314
rs143765918	snp	A/G	0.00478085	0.0486577	utr-variant-3-prime	BAP1	GRCh38.p7	3:52401239	GGCACTGCTGGGCCC[A/G]TTACCCCTTGGCATC	8314
rs143891879	snp	C/T	0.000153988	0.00877328	missense	BAP1	GRCh38.p7	3:52405265	GGGATGGGGCTTGTG[C/T]GCATGAACCAGCCGC	8314
rs143901408	snp	A/G	0.000412143	0.0143493	synonymous-codon	BAP1	GRCh38.p7	3:52407235	GCCTGTGATAGGCAC[A/G]TAGCTGACAAAGTGG	8314
rs144060813	snp	A/G	0.000181739	0.00953081	missense	BAP1	GRCh38.p7	3:52403718	TGTGTGGGCACTGCC[A/G]CAGCCGGACTCCCAG	8314
rs144083199	snp	G/T	0.0164812	0.0892691	intron-variant	BAP1	GRCh38.p7	3:52402443	AGAGGTAGAGACCCT[G/T]GAGCAGGTGCTGGCT	8314
rs144145384	snp	C/T	0.00159617	0.0282053	utr-variant-3-prime	BAP1	GRCh38.p7	3:52401715	TCCCTGAGTTTGGCA[C/T]TCTCCTAAGAGGAAT	8314

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