DNA & RNA Element - UTRdb Gene Name Type ASPicDB UTRaspic Refseq ID Genome RNF181 3'UTR 6377ec32a5 BA091550 NM_016494 chr2:85678139-85678342:+ RNF181 3'UTR f8f3fb63a4 BA091551 NM_016494 chr2:85678139-85678219:+ RNF181 3'UTR 9cd678e549 BA091552 NM_016494 chr2:85678346-85678424:+ RNF181 3'UTR aad7e1299c BA091553 NM_016494 chr2:85678174-85678218:+ RNF181 3'UTR 777a290930 NM_016494 chr2:85678173-85678218:+ RNF181 3'UTR e7d5089a32 NM_016494 chr2:85678035-85678215:+ RNF181 5'UTR 6377ec32a5 CA143754 NM_016494 chr2:85676348-85676397:+ RNF181 5'UTR f8f3fb63a4 CA143755 NM_016494 chr2:85676332-85676397:+ RNF181 5'UTR 9cd678e549 CA143756 NM_016494 chr2:85676365-85676430:+ RNF181 5'UTR aad7e1299c CA143757 NM_016494 chr2:85676332-85676397:+ RNF181 5'UTR ce19242ffc NM_016494 chr2:85676332-85676397:+

DNA & RNA Element - circBase circRNA ID Chrom Start End Strand hsa_circ_0055433 chr2 85823641 85823772 +

DNA & RNA Element - CircNet Circ ID GITPosition Express Symbol Entrez Category Strand Refered Name hsa-circ-RNF181-antisense.1 NM_016494Tchr2:85823702-85824015 expressed RNF181 51255 protein-coding - not_available hsa-circ-RNF181-antisense.2 NM_016494Tchr2:85824015-85824216 expressed RNF181 51255 protein-coding - not_available hsa-circ-RNF181.1 NM_016494Tchr2:85823641-85823772 expressed RNF181 51255 protein-coding + hsa_circ_0055433 hsa-circ-RNF181.2 NM_016494Tchr2:85823641-85824301 expressed RNF181 51255 protein-coding x chr2:85823641-85824301_PA1_RNaseR hsa-circ-RNF181.3 NM_016494Tchr2:85823641-85824054 expressed RNF181 51255 protein-coding x chr2:85823641-85824054_GM12878_poly(A)-

DNA & RNA Element - miRTarBase Target Gene (Entrez ID) miRTarBase ID miRNA Species (miRNA) Target Gene Species (Target Gene) Experiments Support Type References (PMID) MIRT036911 hsa-miR-877-3p Homo sapiens RNF181 51255 Homo sapiens CLASH Functional MTI (Weak) 23622248 MIRT040738 hsa-miR-92b-3p Homo sapiens RNF181 51255 Homo sapiens CLASH Functional MTI (Weak) 23622248

DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0004493 hsa-miR-20a* 51255 RNF181 gaaaUUCACGAGUA-UUA-CGUCa |:||| || | ||| |||| gggaAGGUGAUCCUAAAUCGCAGa 2 19 147 170 [hg19:2:85824774-85824797:+] 0.5261 125 0 -11.28 -0.3214 MIMAT0000760 hsa-miR-331-3p 51255 RNF181 aagaucCUAUCCGGGUCCCCg || | ||||||| aucacaGACCUGGCCAGGGGc 2 16 93 113 [hg19:2:85824720-85824740:+] 0.5960 143 7 -21.89 -0.1276 MIMAT0003260 hsa-miR-592 51255 RNF181 uguaguagcGUAUAACU-GUGUu ::|||||| |||| cccugaggcUGUAUUGAUCACAg 2 14 77 99 [hg19:2:85824704-85824726:+] 0.5960 121 0 -14.67 -0.2922 MIMAT0003321 hsa-miR-651 51255 RNF181 guuuucagUUCGAAUAGGAUUu ||| | ||||||| uguuggggAAGGUGAUCCUAAa 2 15 142 163 [hg19:2:85824769-85824790:+] 0.5261 154 7 -13.40 -0.4199 MIMAT0005798 hsa-miR-1185 51255 RNF181 uuguauguuucccaUAGGAGa |||||| cuuauuaaccuugaAUCCUCa 2 8 37 57 [hg19:2:85824664-85824684:+] 0.5960 120 6 -7.77 -0.1219 MIMAT0003886 hsa-miR-769-5p 51255 RNF181 ucGA-GUCUUGGGU-CUCCAGAGu || || :||| ||||||| cuCUGCAUCCUCCAUCAGGUCUCu 2 21 113 136 [hg19:2:85824740-85824763:+] 0.5261 146 7 -18.71 -0.3072 MIMAT0004919 hsa-miR-541* 51255 RNF181 ucacccuggcugucguCUUAGGAaa ||||||| cuuccuuauuaaccuuGAAUCCUca 3 10 33 57 [hg19:2:85824660-85824684:+] 0.5960 125 0 -9.68 -0.1149 MIMAT0005573 hsa-miR-1225-3p 51255 RNF181 gacccccGCCGUGUCCCCGAGu :||| ||||||||| acagaccUGGC-CAGGGGCUCu 2 16 96 116 [hg19:2:85824723-85824743:+] 0.5611 157 7 -26.92 -0.3354 MIMAT0005592 hsa-miR-1237 51255 RNF181 gacccccugccuCGUCUUCCu |||||||| ugauccuaaaucGCAGAAGGc 2 10 154 174 [hg19:2:85824781-85824801:+] 0.5149 145 7 -12.90 -0.1828 MIMAT0005883 hsa-miR-1293 51255 RNF181 cgUGUUUAGAGGUCU-GGUGGGu | |::|:||: | |||||| uuAAAGGUUUCUUUACCCACCCu 2 21 58 80 [hg19:2:85824685-85824707:+] 0.5960 124 6 -18.36 -0.7311 MIMAT0005920 hsa-miR-1266 51255 RNF181 ucgGGACAAGAUGUCGGGACUCc ::| ||: | ||||||| aggUUUCUUUACCCACCCUGAGg 2 21 62 84 [hg19:2:85824689-85824711:+] 0.5960 148 7 -23.11 -0.4585 MIMAT0005952 hsa-miR-1321 51255 RNF181 uagugUAAGUGGAGGGAc :||: ||||||| cugcgGUUUUCCUCCCUg 2 14 181 198 [hg19:2:85824808-85824825:+] 0.5037 149 7 -20.11 -0.2893 MIMAT0011163 hsa-miR-548q 51255 RNF181 ggcgguaaugaaaaCGUGGUCg ||||||| cuaaaucgcagaagGCACCAGg 2 9 159 180 [hg19:2:85824786-85824807:+] 0.5149 140 7 -17.41 -0.1102 MIMAT0015033 hsa-miR-3159 51255 RNF181 caccggcugugaacaUUAGGAu |||||| uccuuauuaaccuugAAUCCUc 2 8 35 56 [hg19:2:85824662-85824683:+] 0.5960 120 6 -12.10 -0.1204 MIMAT0000252 hsa-miR-7 51255 RNF181 uguuguuuuaGUGAU-CAGAAGGu | ||: ||||||| agugcuggccCUCUGCGUCUUCCu 2 14 15 38 [hg19:2:85824642-85824665:+] 0.5709 144 7 -12.86 -0.4973 MIMAT0003283 hsa-miR-615-3p 51255 RNF181 uucucCCUCUG-GGUCCGA-GCCu | ||:| ||||||| ||| ucgcaGAAGGCACCAGGCUGCGGu 2 18 164 187 [hg19:2:85824791-85824814:+] 0.5149 128 0 -26.11 -0.2021

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G047938 RNF181 Homo sapiens 51255

DNA & RNA Element - TargetScan Gene Name UTR Region Start UTR Region End AIR Total Normalized 3P-seq-tags & Pseudocounts Strand hg19_chromosome Genome Start Genome End RNF181; HSPC238 1 21 100 324.781 + chr2 85824627 85824648 RNF181; HSPC238 22 36 99.77 324.781 + chr2 85824648 85824663 RNF181; HSPC238 37 74 98.832 324.781 + chr2 85824663 85824701 RNF181; HSPC238 75 77 98.119 324.781 + chr2 85824701 85824704 RNF181; HSPC238 78 80 96.58 324.781 + chr2 85824704 85824707 RNF181; HSPC238 81 98 86.962 324.781 + chr2 85824707 85824725 RNF181; HSPC238 99 117 86.493 324.781 + chr2 85824725 85824744 RNF181; HSPC238 118 123 78.119 324.781 + chr2 85824744 85824750 RNF181; HSPC238 124 124 20.364 324.781 + chr2 85824750 85824751 RNF181; HSPC238 125 336 4.251 324.781 + chr2 85824751 85824963 RNF181; HSPC238 337 337 3.235 324.781 + chr2 85824963 85824964 RNF181; HSPC238 338 1083 1.13 324.781 + chr2 85824964 85825710

DNA & RNA Element - RepTar Gene Name miRNA Begin End Profile RNF181 hsa-miR-769-5p beg:120 end:136 pic:3' TCGAGTCTTGGGTC-TCCAGAGT 5'& .||| ||||||| &5' ---------TCCATCAGGTCTC- 3' RNF181 ebv-miR-BART4 beg:114 end:134 pic:3' TCGTGTGGTCGTCGTAGTCCAG 5'& |||. || ||||||||| &5' -GCAT-CCTC---CATCAGGTC 3' RNF181 hsa-miR-1237 beg:163 end:174 pic:3' GACCCCCTGCCTCGTCTTCCT 5'& |||||||| &5' ------------GCAGAAGG- 3' RNF181 hsa-miR-331-3p beg:101 end:114 pic:3' AAGATCCTATCCGGGTCCCCG 5'& || |||||||| &5' ----------GG-CCAGGGGC 3' RNF181 hsa-miR-1321 beg:183 end:199 pic:3' TAGTGTAAGTGGAGGGAC 5'& .||. |||||||| &5' -----GTTTTCCTCCCTG 3' RNF181 hsa-miR-548q beg:162 end:180 pic:3' GGCGGTAATGAAAACGTGGTCG 5'& ||| ||||||| &5' -CGCAGAAG-----GCACCAG- 3' RNF181 hsa-miR-1225-3p beg:101 end:116 pic:3' GACCCCCGCCGTGTCCCCGAGT 5'& ||| ||||||||| &5' --------GGC-CAGGGGCTC- 3' RNF181 hsa-miR-7 beg:22 end:38 pic:3' TGTTGTTTTAGTGAT-CAGAAGGT 5'& | ||. ||||||| &5' ----------CTCTGCGTCTTCC- 3' RNF181 hiv1-miR-H1 beg:175 end:199 pic:3' CGGGTCCG-TGC-----GGAGGGACC 5'& |||||| .|| |||||||| &5' --CCAGGCTGCGGTTTTCCTCCCTG- 3' RNF181 hsa-let-7d beg:127 end:143 pic:3' TTGATACGTTGGATGATGGAGA 5'& . || ||||.||| &5' --------GGTCT-CTACTTCT 3' RNF181 hsa-let-7g beg:125 end:142 pic:3' TTGACATGTTT-GATGATGGAGT 5'& ||.. || ||||.|| &5' -------CAGGTCT-CTACTTC- 3' RNF181 hsa-miR-1207-5p beg:181 end:201 pic:3' GGGGAGGGTC----GGAGGGACGGT 5'& |.| |||||||||. &5' -------CGGTTTTCCTCCCTGCT- 3' RNF181 hsa-miR-1234 beg:169 end:184 pic:3' CACCCCACCCACCA--GTCCGGCT 5'& || |||||.| &5' -----------GGCACCAGGCTG- 3' RNF181 hsa-miR-1253 beg:174 end:198 pic:3' ACGTCCGAC--TAGAAGAAGAGA 5'& ||||||| .|.||| || || &5' --CAGGCTGCGGTTTTCCTCCCT 3' RNF181 hsa-miR-1296 beg:95 end:118 pic:3' CCTCTACCTCGGT-CCCGGGATT 5'& ||| .|||| ||||.||. &5' --AGACCTGGCCAGGGGCTCTG- 3' RNF181 hsa-miR-139-3p beg:16 end:37 pic:3' TGAGGTTGTCCCGGCGCAGAGG 5'& | .| |.||||||.| &5' ---CTGGCCCT-CTGCGTCTTC 3' RNF181 hsa-miR-141star beg:132 end:156 pic:3' AGGTTGTGACATGACCTTCTAC 5'& ||.| |||| |||||.|| &5' TCTACTTCTGTTGGGGAAGGTG 3' RNF181 hsa-miR-146a beg:170 end:192 pic:3' TTG-GGTACCTTAAGTCAAGAGT 5'& ..| ||| || |.|||.|| &5' GGCACCA-GGCTG-CGGTTTTC- 3' RNF181 hsa-miR-146b-5p beg:169 end:192 pic:3' TCGGATACCTTAAGTCAAGAGT 5'& .|| || |.|||.|| &5' GGCACCAGGCTG-CGGTTTTC- 3' RNF181 hsa-miR-2114star beg:98 end:116 pic:3' TTCAGGGAACGAACTCCGAGC 5'& ||| || |.||||| &5' -----CCTGGCCAGGGGCTC- 3' RNF181 hsa-miR-214 beg:179 end:202 pic:3' TGACGGACAGACAC--GGACGACA 5'& .|||| ||.| ||||||| &5' GCTGCG-GTTTTCCTCCCTGCTG- 3' RNF181 hsa-miR-214 beg:128 end:147 pic:3' TGACGGACAGACAC--GGACGACA 5'& |||| .|||.|| &5' -------GTCTCTACTTCTGTTG- 3' RNF181 hsa-miR-2355 beg:131 end:151 pic:3' AACAGGTAACATAGACCCCTA 5'& ||.| .|||||| &5' ---TCTACTTCTGTTGGGGA- 3' RNF181 hsa-miR-3127 beg:63 end:83 pic:3' GAAGGGTAAGGTGTTCGGGACTA 5'& ||.|. || || |||||| &5' -TTTCTTTACC-CA--CCCTGA- 3' RNF181 hsa-miR-3129 beg:123 end:147 pic:3' TTTGGT-TAGAGATGT-GATGACG 5'& |.|| .||||||| ||..|| &5' --ATCAGGTCTCTACTTCTGTTG- 3' RNF181 hsa-miR-3144-5p beg:119 end:137 pic:3' GATATATAGAGAAA--CCAGGGGA 5'& ||| ||||.|. &5' --------CTCCATCAGGTCTCT- 3' RNF181 hsa-miR-3173 beg:23 end:40 pic:3' ACCGGACGGATAAAGGAGGAAA 5'& .|||| ||.||||| &5' ---TCTGCG----TCTTCCTT- 3' RNF181 hsa-miR-3174 beg:18 end:44 pic:3' CCG--AGACGTAGAGATTGAGTGAT 5'& ||| |||||.|||. ||.|.|| &5' GGCCCTCTGCGTCTTC--CTTATTA 3' RNF181 hsa-miR-3195 beg:96 end:114 pic:3' TTGGGCCCGGGCCGCGC 5'& .|||. |||| || || &5' GACCT-GGCCAGGGGC- 3' RNF181 hsa-miR-325 beg:192 end:203 pic:3' TGTGAATGACCTGTGGATGATCC 5'& |||.||.| &5' --------------CCTGCTGG- 3' RNF181 hsa-miR-374bstar beg:182 end:203 pic:3' TTACTATTATGTTGGACGATTC 5'& |.| | | ||||||.. &5' ---GGTTTTCCTCCCTGCTGG- 3' RNF181 hsa-miR-421 beg:128 end:148 pic:3' CGCGGGTTAATTACAGACAACTA 5'& |.|. |||||||. &5' --GTCTCTACT---TCTGTTGG- 3' RNF181 hsa-miR-4256 beg:118 end:134 pic:3' TGGAAGTAGTCCAGTCTA 5'& ||| ||||||||| &5' -CCTCCATCAGGTC---- 3' RNF181 hsa-miR-4271 beg:20 end:40 pic:3' GGGGTGGAAAAGAAGGGGG 5'& ||| |. ||||||.. &5' -CCCTCTGCGTCTTCCTT- 3' RNF181 hsa-miR-4291 beg:192 end:203 pic:3' TCGACAAGGACGACTT 5'& |||||||. &5' -------CCTGCTGG- 3' RNF181 hsa-miR-4323 beg:0 end:15 pic:3' AGACTCCGACACCCCGAC 5'& ||||. |||||||| &5' ---GAGGT--TGGGGCTG 3' RNF181 hsa-miR-4325 beg:74 end:90 pic:3' AGTGACTCTGTTCACGTT 5'& | |||||.| ||.| &5' -CCCTGAGGC---TGTA- 3' RNF181 hsa-miR-490-5p beg:69 end:89 pic:3' TGGGTGGACCTCTAGGTACC 5'& ||||||| |||. |..| &5' ACCCACCCTGAGG-CTGT-- 3' RNF181 hsa-miR-511 beg:163 end:177 pic:3' ACTGACGTCTCGTTTTCTGTG 5'& |||.|||.||| &5' ----------GCAGAAGGCAC 3' RNF181 hsa-miR-512-5p beg:0 end:19 pic:3' CTTTCACGGGAGTTCCGACTCAC 5'& |.|.| | .||||||||| &5' GGAGG-----TTGGGGCTGAGTG 3' RNF181 hsa-miR-548s beg:88 end:109 pic:3' TTTTATTGACGTCAAAACCGGTA 5'& |.|. ||| |||||| &5' ----TGATCACAGACCTGGCCA- 3' RNF181 hsa-miR-550 beg:182 end:203 pic:3' CCCGAGAATGAGGGA-GTCCGTGA 5'& ||.|.| |||||| | ||| &5' -GGTTTTC-CTCCCTGCTGGC--- 3' RNF181 hsa-miR-555 beg:54 end:76 pic:3' TAGTCTCCAAGTCGAATGGGA 5'& ||.| |||||. .|||||| &5' ATTAAAGGTTTC-TTTACCC- 3' RNF181 hsa-miR-595 beg:165 end:190 pic:3' TCTG-TGTGGTGCCG-TGTGAAG 5'& ||| .||||| ||| .|. ||. &5' AGAAGGCACCA-GGCTGCGGTTT 3' RNF181 hsa-miR-608 beg:60 end:81 pic:3' TGCCTCGACAGGGTTGTGGTGGGGA 5'& .|.| ||. || ||||||. &5' ----GGTT-TCTTTAC-CCACCCT- 3' RNF181 hsa-miR-621 beg:5 end:25 pic:3' TCCATTCGCGACA-ACGATCGG 5'& .| |||| ||||.||| &5' -----GGGGCTGAGTGCTGGCC 3' RNF181 hsa-miR-658 beg:14 end:31 pic:3' TGGTTGCCTGGATGAA-GGGAGGCGG 5'& |.|| |||||.|| &5' -----------TGCTGGCCCTCTGC- 3' RNF181 hsa-miR-664star beg:91 end:110 pic:3' TAGGTTAGTAAAAGGGATCGGTCA 5'& .|||| |||.||||| &5' ----GATCACAGA-CCTGGCCAG- 3' RNF181 hsa-miR-671-3p beg:1 end:23 pic:3' CC-ACCTCGGGACTCTTGGCCT 5'& || |||.|| |||| .|.|| &5' GGTTGGGGC--TGAGTGCTGG- 3' RNF181 hsa-miR-761 beg:179 end:202 pic:3' ACACAGTCAAAGT--GGGACGACG 5'& || |.||||. |||||||| &5' --TG-CGGTTTTCCTCCCTGCTG- 3' RNF181 hsa-miR-765 beg:177 end:196 pic:3' GTAGTGGAAGGAAGAGGAGGT 5'& .|. ||.|||||| &5' ----GCTGCGGTTTTCCTCC- 3' RNF181 hsa-miR-936 beg:178 end:202 pic:3' GACGCTA--AGGAGGGAGATGACA 5'& |||||.| |||||||| .||| &5' CTGCGGTTTTCCTCCCT--GCTG- 3' RNF181 hsv2-miR-H23 beg:99 end:124 pic:3' CGACCG---TTCGAGGTGCCGGA 5'& ||||| ..|||| | ||| &5' -CTGGCCAGGGGCTCTGCATCCT 3' RNF181 kshv-miR-K12-5 beg:102 end:124 pic:3' TGGCC-GTTCAAGGTCCGTAGGAT 5'& || ||.| |. ||||||| &5' ---GGCCAGGGGCTCTGCATCCT- 3'

DNA & RNA Element - miRNAMap Gene Name Mature miRNA Target Start Target End miRNA 3-5 Alignment Target 5-3 RNF181; HSPC238 hsa-miR-214 195 202 ---------------------GACGGACAGACAC--GGACGACA |||| ||:| ||||||| UAAAUCGCAGAAGGCACCAGGCUGCG-GUUUUCCUCCCUGCUGG RNF181; HSPC238 hsa-miR-331 106 113 AAGAUC----------------------CUAU-CCGGGUCCCCG || || |||||||| UACCCACCCUGAGGCUGUAUUGAUCACAGACCUGG-CCAGGGGCU RNF181; HSPC238 hsa-miR-769-5p 129 136 -----------------UCGAGUCUUGGGUC----UCCAGAGU :|||| | |:|| ||||||| UCACAGACCUGGCCAGGGGCUCUGCAUCCUCCAUCAGGUCUCU RNF181; HSPC238 hsa-let-7b 98 126 -UUGGUGUG----UUG-GAUGAUGGAGU :||| :| ::| ||:| |||| AGACCUGGCCAGGGGCUCUGCAUCCUCC RNF181; HSPC238 hsa-let-7c 103 126 -UUGGUAUGUUG-GAUGAUGGAGU ::||| ::| ||:| |||| UGGCCAGG-GGCUCUGCAUCCUCC RNF181; HSPC238 hsa-let-7d 111 144 -UGAUACGUUGGAU----------GAUGGAGA- :|| |||| ||| ||||:||| GGCUCUGCAUCCUCCAUCAGGUCUCUACUUCUG RNF181; HSPC238 hsa-let-7e 111 143 -UGAUAUGUUGGAGG----------AUGGAGU :|| |:|| ||||| |||:|| GGCUCUGCAUCCUCCAUCAGGUCUCUACUUCU RNF181; HSPC238 hsa-miR-10a 94 113 -GUGUUUAAGCCUAGAUGUCCCAU ||||:| :|| ||||| UCACAGACCUGGC----CAGGGG- RNF181; HSPC238 hsa-miR-124a 19 42 -ACCGUAAGUGGCGCACGGAAUU |||| || ||: ||||| CUGGCCCUCUGCGUCUUCCUUAU RNF181; HSPC238 hsa-miR-129 165 188 -CGU---UCG-GGUCUGGCGUUUUUC ||| :|| ||||:|:||:: CGCAGAAGGCACCAGGCUGCGGU--- RNF181; HSPC238 hsa-miR-138 163 184 CUAAGUGU----UGUGGUC-GA- ||:|| :|||||| || --AUCGCAGAAGGCACCAGGCUG RNF181; HSPC238 hsa-miR-189 153 178 UGACUA-----UAGUCGAGUCAUCCGUG- |||| ||| ||| |||||| -GUGAUCCUAAAUCG---CAGAAGGCACC RNF181; HSPC238 hsa-miR-18a* 1 19 UCUUCCUCGUGAAUCCCG--UCA- |||| : :|||| ||| ----GGAGGUU--GGGGCUGAGUG RNF181; HSPC238 hsa-miR-191* 145 171 -CCCCUGCU-UUAGGUUC--GCGUCG ||||| :|||| ||||| UGGGGAAGGUGAUCCUAAAUCGCAGA RNF181; HSPC238 hsa-miR-199a 2 24 CUUGUCC-AUCA-GACUUGUGACCC ||| |:| ||||:::|||| ---GAGGUUGGGGCUGAGUGCUGGC RNF181; HSPC238 hsa-miR-200a* 122 157 -AGGUCGU-----------GACAGGCCAUUCUAC- |||| || ||||: || |||:|| CUCCAUCAGGUCUCUACUUCUGUUGGGGAAGGUGA RNF181; HSPC238 hsa-miR-200b 54 94 CAGUAGU---------AAUGG-------UCCGUCAUAAU- ||||:| ||||| |||| |||||: CUCAUUAAAGGUUUCUUUACCCACCCUGAGGCUGUAUUGA RNF181; HSPC238 hsa-miR-200c 54 94 -GGUAGU---------AAUGGG-------CCGUCAUAAU- :|||:| |||||| ||| |||||: CUCAUUAAAGGUUUCUUUACCCACCCUGAGGCUGUAUUGA RNF181; HSPC238 hsa-miR-214 180 203 -GACGGACAGACAC--GGACGACA |||| ||:| ||||||| GCUGCG-GUUUUCCUCCCUGCUGG RNF181; HSPC238 hsa-miR-24 4 26 GACAAGGACGACU--UGACUCGGU ||| ||||| :||| ||| -GGUUGGGGCUGAGUGCUG-GCCC RNF181; HSPC238 hsa-miR-296 7 28 UGUCCUAACUCCCCCCCGGGA- :||: |||| | |||||| -UGGGGCUGAGUGCUGGCCCUC RNF181; HSPC238 hsa-miR-299-5p 141 161 UACAUACACCCUGCCAUUUGGU ||| || |||| |||:| || CUGU-UG-GGGAAGGUGAUCCU RNF181; HSPC238 hsa-miR-324-3p 166 189 GGUCG-UCGUGGACCC-CGUCACC ||| :||||| || ||:|| GCAGAAGGCACCAGGCUGCGGUU- RNF181; HSPC238 hsa-miR-331 93 115 AAGAUCCUAU-CCGGGUCCCCG- || || || |||||||| AUCACAGACCUGG-CCAGGGGCU RNF181; HSPC238 hsa-miR-338 1 24 AGUUGUUUUAG---UGACU-ACGACCU :|::|: :|||| |||||| ----GGAGGUUGGGGCUGAGUGCUGGC RNF181; HSPC238 hsa-miR-339 79 114 -ACU-CGA--------------GGACCUCCUGUCCCU- ||| ||| ||||| |||||: CUGAGGCUGUAUUGAUCACAGACCUGGC---CAGGGGC RNF181; HSPC238 hsa-miR-34a 98 120 UUGUUGG-UCGA-UUCUGUGACGGU :||| :|| ::|:| |||| --AGACCUGGCCAGGGGCUCUGCA- RNF181; HSPC238 hsa-miR-370 175 205 -GGUCC--------AAGGUGGGGUCGUCCG- ||||| |||| :||| || ||| ACCAGGCUGCGGUUUUCC-UCCCUGCUGGCC RNF181; HSPC238 hsa-miR-378 94 114 UGUGUCCUGGACCUCAGUCCUC- |||| ||||||| ||||:| UCACA-GACCUGGC--CAGGGGC RNF181; HSPC238 hsa-miR-412 142 158 UGCCGAUCACCUGGUCCACUUCA |:|:| ||| |||||| --UGUUGG-GGA--AGGUGAU-- RNF181; HSPC238 hsa-miR-423 78 108 -GACUCCC-CGGA------GUCUGGCUCGA |||||| |: |||||| :|| CCUGAGGCUGUAUUGAUCACAGACCUGGCC RNF181; HSPC238 hsa-miR-429 62 94 UGCCAAA---AUGG-------UCUGUCAUAAU- ||||| |||| ||:| |||||: -AGGUUUCUUUACCCACCCUGAGGCUGUAUUGA RNF181; HSPC238 hsa-miR-432* 97 124 -UCUGUACC--UCCUCG----GUAGGUC |||| ||| |||:|| ||||| CAGACCUGGCCAGGGGCUCUGCAUCCU- RNF181; HSPC238 hsa-miR-450 141 174 -AUAAUCCUUGUG---------UAGCGUUUUU- |:||:||:| ||||||:||: CUGUUGGGGAAGGUGAUCCUAAAUCGCAGAAGG RNF181; HSPC238 hsa-miR-452* 1 17 GAAGAAACGUCUA-CUCUGACU- | ||:| |:|:|||| -------GGAGGUUGGGGCUGAG RNF181; HSPC238 hsa-miR-453 98 126 GCUUGAGUGGUGCCUGUU-----GGAG- || || :||| ||:| |||| AGACCUGGCCAGGGGCUCUGCAUCCUCC RNF181; HSPC238 hsa-miR-484 1 24 UAGCCCUC---CCCUGACUCG-GACU- |||| |||:|||||: |||: ----GGAGGUUGGGGCUGAGUGCUGGC RNF181; HSPC238 hsa-miR-485-5p 88 118 CUUAAGUAGUG------CCGGUCG--GAGA- ||| ||||| |||||| |||| -UAUUGAUCACAGACCUGGCCAGGGGCUCUG RNF181; HSPC238 hsa-miR-486 1 24 GAGCC-CCG---UCGAGUCAUGUCCU || ||: :||| |||:| || ---GGAGGUUGGGGCUGAGUGCUGGC RNF181; HSPC238 hsa-miR-491 51 79 -AGGAGUACCUUCCCAAG----GGGUGA ||||||| |||| ||| ||||| AUCCUCAUUAAAGGUUUCUUUACCCACC RNF181; HSPC238 hsa-miR-492 108 136 -UUCUUAGAAC-AGGGC---GUCCAGGA ::|: ||| |||: ||||||: AGGGGCUCUGCAUCCUCCAUCAGGUCUC RNF181; HSPC238 hsa-miR-503 165 203 GACGUCU---------UGAC-----AAGG-GCGACGAU- ||||| :||| |||| | |||||: -CGCAGAAGGCACCAGGCUGCGGUUUUCCUCCCUGCUGG RNF181; HSPC238 hsa-miR-504 13 36 UAUCUCACGUCUGGU---CCCAGA- |||||| |:|| | |||| --UGAGUGCUGGCCCUCUGCGUCUU RNF181; HSPC238 hsa-miR-511 147 178 ACUGACGUCU---------CGUUUUCUGUG- |: | || |||:|||:||| GGGAAGGUGAUCCUAAAUCGCAGAAGGCACC RNF181; HSPC238 hsa-miR-512-5p 1 20 CUUUCACGGGAGUUCCGACUCAC- |:|:|| : ||||||||| GGAGGU-----UGGGGCUGAGUGC RNF181; HSPC238 hsa-miR-515-3p 152 179 UGCG--AGG-UUU----UCUUCCGUGAG- |: ||| ||| ||||||||| | -GGUGAUCCUAAAUCGCAGAAGGCAC-CA RNF181; HSPC238 hsa-miR-515-5p 124 153 -GUCUUUCACGA----AAGAAAACCUCUU- || |:|| || |||| ||||:||| CCAUCAGGU-CUCUACUUCUGUUGGGGAAG RNF181; HSPC238 hsa-miR-519e* 128 153 CUUUCACGAGG-GAA---AACCUCUU- |:|| |||: ||| ||||:||| -CAGGU-CUCUACUUCUGUUGGGGAAG RNF181; HSPC238 hsa-miR-520a* 8 31 -UCU--UUCAUGAA-GGGAGACCUC :|: :|||:|| ||||||| GGGGCUGAGUGCUGGCCCUCUGC-- RNF181; HSPC238 hsa-miR-525 8 31 -UCU--UUCACGUA-GGGAGACCUC :|: :||||| ||||||| GGGGCUGAGUGCUGGCCCUCUGC-- RNF181; HSPC238 hsa-miR-532 151 177 UGCC---AGGAU---GUGAGUUCCGUAC || ||||| |:| |||||| -AGGUGAUCCUAAAUCGCAGAAGGCAC- RNF181; HSPC238 hsa-miR-548b 165 192 -UGUUUU-CGU----UGACUCCAAGAAC :||:|| ||| :||| ||||:| CGCAGAAGGCACCAGGCUGCGGUUUUC- RNF181; HSPC238 hsa-miR-548d 165 192 -CGUUUUCU-----UUGACACCAAAAAC |||:|||: ::||| |||||| CGCAGAAGGCACCAGGCUGCGGUUUUC- RNF181; HSPC238 hsa-miR-574 8 34 CACCC-ACACACGUACU------CGCAC ||| || |||| ||: |||| -GGGGCUGAGUGC-UGGCCCUCUGCGUC RNF181; HSPC238 hsa-miR-588 65 111 CAAGAU-UGGGU-------------AAC----------ACCGGUU |||| ||||| ||| ||||||: UUUCUUUACCCACCCUGAGGCUGUAUUGAUCACAGACCUGGCCAGG RNF181; HSPC238 hsa-miR-604 77 109 CAGGACUUAAGGCG---------------UCGGA ||||| |:|: :||| -CCCUGAGG-CUGUAUUGAUCACAGACCUGGCCA RNF181; HSPC238 hsa-miR-605 150 191 -UCC--------------UCUUCCGUGGU---ACCCUAAAU ||| ||||||||||| || |:||| AAGGUGAUCCUAAAUCGCAGAAGGCACCAGGCUGCGGUUUU RNF181; HSPC238 hsa-miR-611 96 127 CAGUCUGGGGC--UCCCC-------AGGAGCG- ||||||: | ||||| ||||| | -ACAGACCUGGCCAGGGGCUCUGCAUCCUC-CA RNF181; HSPC238 hsa-miR-615 167 188 -UCUCCCUCUG-GGUCCGA-GCCU ||| ||:| ||||||| ||| CAGA---AGGCACCAGGCUGCGGU RNF181; HSPC238 hsa-miR-617 130 154 -CGGUG--GAAGUUUA-CCCUUCAGA |:| |||| |||||| GGUCUCUACUUCUGUUGGGGAAGG-- RNF181; HSPC238 hsa-miR-619 78 112 UGAC-CCG----------UGUUUGUACAGGUCCAG ||| ||| |||:|| || ||||| CCUGAGGCUGUAUUGAUCACAGACCUGGCCAGGG- RNF181; HSPC238 hsa-miR-621 2 26 -UCCAUUCGCGACA-ACGAUCGG- |||| :| |||| ||||:||| GAGGUUGGGGCUGAGUGCUGGCCC RNF181; HSPC238 hsa-miR-623 75 114 -UGGGUUGUCGG--------------GGAC-GUUCCCUA |||| :||: |||| | ||||: CACCCUGAGGCUGUAUUGAUCACAGACCUGGCCAGGGGC RNF181; HSPC238 hsa-miR-629 129 153 CGACCC-----GAAUGCAACCCUCUUG || ||| :|||||| ||| --AGGUCUCUACUUCUGUUGGG-GAAG RNF181; HSPC238 hsa-miR-634 1 24 CAGGUUUCAACCCC-----ACGACCAA :|:||||||| |||||| ---GGAGGUUGGGGCUGAGUGCUGGC- RNF181; HSPC238 hsa-miR-637 4 29 UGCGUCUCGGGCUU----UCGGGGGUCA |: |:| |:||: :||||:| -GGUUGGGGCUGAGUGCUGGCCCUCU-- RNF181; HSPC238 hsa-miR-639 151 189 UGUCGCG-------AGCGU------UGG--CGUCGCUA- :|:| ||||| ||| || |||:| -AGGUGAUCCUAAAUCGCAGAAGGCACCAGGCUGCGGUU RNF181; HSPC238 hsa-miR-647 1 26 CUUCCU---UC-ACUCACG-UCGGUG |:||| :| ||||||| :||| GGAGGUUGGGGCUGAGUGCUGGCCC- RNF181; HSPC238 hsa-miR-648 104 125 -UGGUCA-CGGGACGUGUGAA :|||| ||:|||||: || GGCCAGGGGCUCUGCAUCCUC RNF181; HSPC238 hsa-miR-649 43 69 CUGAGAACUUGUU-GUG---UCCAAA- || ||||||: ||: |||||| AAC-CUUGAAUCCUCAUUAAAGGUUUC RNF181; HSPC238 hsa-miR-650 100 125 CAGGAC----UCUCGCGACGGAGGA- |||| :|:|| |||| |||| -ACCUGGCCAGGGGCUCUGCAUCCUC RNF181; HSPC238 hsa-miR-658 8 32 UGGUUGCCUGG---AUGAA-GGGAGGCGG ||:|: |:|| |||||:|| -----GGGGCUGAGUGCUGGCCCUCUGCG RNF181; HSPC238 hsa-miR-661 83 121 UGCG-CGU--------------CCGGUCUCUGGGUCCGU- || |:| ||||||:|:|:| ||| -GGCUGUAUUGAUCACAGACCUGGCCAGGGGCUCU-GCAU RNF181; HSPC238 hsa-miR-663 178 202 CGCCAGGGCGCCGC-----GGGGCGGA || |:||||: |||:||: -AGG--CUGCGGUUUUCCUCCCUGCUG RNF181; HSPC238 hsa-miR-668 2 25 CAUCA---CCCGGCUCGGCUCACUGU || ||||:|||: ||:| -GAGGUUGGGGCUGAGUGC--UGGCC RNF181; HSPC238 hsa-miR-671 93 125 UGGAG-GUCGGGGA-GGU-CCCGA-----AGGA- || ||| ||: ||| ||||| |||| --AUCACAGACCUGGCCAGGGGCUCUGCAUCCUC RNF181; HSPC238 hsa-miR-675 10 39 GUGA--CAC--CCGGGAGAGGCGU--GGU :|| ||| |||||||| ||: || GGCUGAGUGCUGGCCCUCUGCGUCUUCCU RNF181; HSPC238 hsa-miR-765 92 128 GUAGUGGAAGGA----------AG----AGGAGGU- ||||| ||| || ||||||| GAUCACAGACCUGGCCAGGGGCUCUGCAUCCUCCAU RNF181; HSPC238 hsa-miR-766 1 19 CGACUCCGACACCCCGACCUCA- ||||: |||||||| ||| --GGAGGU--UGGGGCUG-AGUG RNF181; HSPC238 hsa-miR-768-5p 92 128 -UAGUGA---GGCA------UGAAA-GUAGGAGGUUG ||||| |:| :|| ||||||||| GAUCACAGACCUGGCCAGGGGCUCUGCAUCCUCCAU- RNF181; HSPC238 hsa-miR-769-5p 110 137 -UCGAGUCUUGGGUC----UCCAGAGU :|||| | |:|| ||||||| GGGCUCUGCAUCCUCCAUCAGGUCUCU RNF181; HSPC238 hsa-miR-92b 1 21 -CUCCGGCCCUG-CUCACGUUAU |||| |||:| |||||| GGAGGUUGGGGCUGAGUGCU--- RNF181; HSPC238 hsa-let-7b 122 142 uuGGUGUGUUGGAUGAUGGAGu |||: :::|| ||||:|| ctCCATCAGGTCT-CTACTTCt RNF181; HSPC238 hsa-let-7c 122 142 uuGGUAUGUUGGAUGAUGGAGu |||| :::|| ||||:|| ctCCATCAGGTCT-CTACTTCt RNF181; HSPC238 hsa-let-7d 112 142 uGAUACGUUGGA-----U-----GAUGGAGA || |||| ||| | ||||:||| gCTCTGCATCCTCCATCAGGTCTCTACTTCT RNF181; HSPC238 hsa-let-7e 112 142 uGAUAUGUUGGAG----------GAUGGAGu || |:|| |||| ||||:|| gCTCTGCATCCTCCATCAGGTCTCTACTTCt RNF181; HSPC238 hsa-miR-10a 95 113 GUGUUUAAGCCUAGAUGUCCCau ||||:| :|| | ||||| CACAGACCTGG--C--CAGGGgc RNF181; HSPC238 hsa-miR-124a 20 41 ACCGUAAGUGGCGCACGGAAUu |||| || ||: | ||||| TGGCCCTCTGCGTCTTCCTTAt RNF181; HSPC238 hsa-miR-129 153 173 CGUUCGGGUCUGGCGUUUUUC |::| ||:| |:||||:||:| GTGATCCTAAATCGCAGAAGG RNF181; HSPC238 hsa-miR-138 161 181 cUAAGUGU----UGUGGUCga | ||:|| :|||||| aAATCGCAGAAGGCACCAGgc RNF181; HSPC238 hsa-miR-189 152 176 ugACUAUAG--UCGAGUCAUCCGUG |||| : | | ||| |||||| ggTGATCCTAAATCGCAGAAGGCAC RNF181; HSPC238 hsa-miR-191* 146 170 CCCCUGCU-UUAGG--UUCGCGUCg ||||| |: :|||| || ||||| GGGGAAGGTGATCCTAAATCGCAGa RNF181; HSPC238 hsa-miR-193a 6 28 gACCCUGAAACAU--CCGGucaa ||||:|| ||: |||| tTGGGGCTGAGTGCTGGCCctct RNF181; HSPC238 hsa-miR-199a 1 23 cuugUCCA--UCAGACUUGUGACCc |||| :| ||||:::|||| --ggAGGTTGGGGCTGAGTGCTGGc RNF181; HSPC238 hsa-miR-200a* 134 155 AGGUCGUGACAGGCCAUUCUAC ||:| : ||||: || |||:|| TCTACTTCTGTTGGGGAAGGTG RNF181; HSPC238 hsa-miR-200b 64 92 CAGUAGUAAUGG-------UCCGUCAUAAu ||: || ||||| |||| ||||| GTT-TCTTTACCCACCCTGAGGCTGTATTg RNF181; HSPC238 hsa-miR-200c 64 92 gguAGUAAUGGG-------CCGUCAUAAu || |||||| ||| ||||| gttTCTTTACCCACCCTGAGGCTGTATTg RNF181; HSPC238 hsa-miR-214 181 202 GACGGACAGA--CACGGACGACa ||| | ||:| | ||||||| CTG-CGGTTTTCCTCCCTGCTGg RNF181; HSPC238 hsa-miR-24 3 25 gaCAAGGACGACU--UGACUCGGu ||| ||||| :||| ||| agGTTGGGGCTGAGTGCTG-GCCc RNF181; HSPC238 hsa-miR-296 6 26 uguCCUAACUCCCCCCCGGGA ||: |||| | |||||| ttgGGGCTGAGTGCTGGCCCT RNF181; HSPC238 hsa-miR-331 93 113 aAGAUCCUAUCCGGGUCCCCG || || | |||||||| aTCACAGACCTGGCCAGGGGC RNF181; HSPC238 hsa-miR-339 91 112 ACUCGAGGACCU---CCUGUCCCu ||| | | || || ||||| TGATCAC--AGACCTGGCCAGGGg RNF181; HSPC238 hsa-miR-34a 95 120 uUGU-UGG-UCGAU-UCUGUGACGgu ||| ||| :|| | :|:| |||| cACAGACCTGGCCAGGGGCTCTGCat RNF181; HSPC238 hsa-miR-370 183 203 gGUCCAAGGUGGGGUCGUCCG |:| ||:| :||| || ||| gCGGTTTTCCTCCCTGCTGGC RNF181; HSPC238 hsa-miR-412 137 159 UGCCGAUCACCUGGUCCACUuca || ||: |||: |||||| ACTTCTGTTGGGGAAGGTGAtcc RNF181; HSPC238 hsa-miR-423 79 107 GACUCC-------CCGGAGUCUGGCUCGa |||||| | :| |||||| :|| CTGAGGCTGTATTGATCACAGACCTGGCc RNF181; HSPC238 hsa-miR-429 61 92 UGCCA---AAAUGG-------UCUGUCAUAAu | ||| |||||| ||:| ||||| AAGGTTTCTTTACCCACCCTGAGGCTGTATTg RNF181; HSPC238 hsa-miR-432* 98 124 UCUGUACC--UCCUC----GGUAGGuc |||| ||| |||:| ||||| AGACCTGGCCAGGGGCTCTGCATCCtc RNF181; HSPC238 hsa-miR-450 142 172 AUAAUCCUU---------GUGUAGCGUUUUu |:||:||:| :| ||||||:|| TGTTGGGGAAGGTGATCCTAAATCGCAGAAg RNF181; HSPC238 hsa-miR-485-5p 87 125 CUUAAGUAGUG-------------CCG----GUCGGAGa | ||| ||||| ||| || |||| GTATTGATCACAGACCTGGCCAGGGGCTCTGCATCCTCc RNF181; HSPC238 hsa-miR-486 5 23 gAGCCCCGUCGAGUCAUGUCCu |:||||| | |||:| || gTTGGGGCTG---AGTGCTGGc RNF181; HSPC238 hsa-miR-491 52 78 AGGAGUACCUUCC----CAAGGGGUGa ||||||| |||| || ||||| TCCTCATTAAAGGTTTCTTTACCCACc RNF181; HSPC238 hsa-miR-492 115 135 uuCUUAGAACAGGGCGUCCAGga | ||| ||| |||||| ctGCATC--CTCCATCAGGTCtc RNF181; HSPC238 hsa-miR-503 181 201 GACGUCUUGACAAGG-GCGACGAu ||||:| | |||| | ||||| CTGCGG---TTTTCCTCCCTGCTg RNF181; HSPC238 hsa-miR-504 11 34 uauCUCACGUCUG---GUCCCAGA |||||| |:| | | |||| gctGAGTGCTGGCCCTCTGCGTCT RNF181; HSPC238 hsa-miR-511 154 176 ACU--GACGUCUCGUUUUCUGUG ||| || | |||:|||:||| TGATCCTAAATCGCAGAAGGCAC RNF181; HSPC238 hsa-miR-515-3p 153 178 ugCGAGG-UUU----UCUUCCGUGag | ||| ||| ||||||||| gtGATCCTAAATCGCAGAAGGCACca RNF181; HSPC238 hsa-miR-515-5p 125 151 GUCUUUCA-CGA--AAGAAAACCUCUU || |:|| || |||| ||||:||| CATCAGGTCTCTACTTCTGTTGGGGAA RNF181; HSPC238 hsa-miR-519e* 127 151 cuUUCACGAGG-GAA---AACCUCUU |:|| |||: ||| ||||:||| tcAGGT-CTCTACTTCTGTTGGGGAA RNF181; HSPC238 hsa-miR-520a* 11 32 ucuuUCAUGA-AGGGAGACcuc |||:|| ||||||| gctgAGTGCTGGCCCTCTGcgt RNF181; HSPC238 hsa-miR-525 11 32 ucuuUCACG-UAGGGAGACcuc ||||| : ||||||| gctgAGTGCTGGCCCTCTGcgt RNF181; HSPC238 hsa-miR-532 153 177 ugCCAGGAU---GUGAGUUCCGUac | ||||| |:| |||||| gtGATCCTAAATCGCAGAAGGCAcc RNF181; HSPC238 hsa-miR-548b 166 192 uGUUUUC----GU-UGACUCCAAGAac ||:||| || :||| ||||:| gCAGAAGGCACCAGGCTGCGGTTTTcc RNF181; HSPC238 hsa-miR-548d 166 192 CGUUUUC-----UUUGACACCAAAAac |||:||| |::||| |||||| GCAGAAGGCACCAGGCTGCGGTTTTcc RNF181; HSPC238 hsa-miR-574 2 20 CACCCACACACGUACUCGCac | || || | || ||||:| GAGGTTG-GGGC-TGAGTGct RNF181; HSPC238 hsa-miR-588 89 109 caagauuggguaacACCGGUu |||||| attgatcacagaccTGGCCAg RNF181; HSPC238 hsa-miR-604 104 123 CAGG-ACUUAAGGCGUCGGA | || |:: ||:||| ||| GGCCAGGGGCTCTGCATCCT RNF181; HSPC238 hsa-miR-605 165 190 uCCUCUUCCGUGGU---ACCCUAAAu | ||||||||||| || |:||| cGCAGAAGGCACCAGGCTGCGGTTTt RNF181; HSPC238 hsa-miR-611 95 126 caGUCUGG---GGCUCCC------CAGGAGcg |||||| || :||| ||||| caCAGACCTGGCCAGGGGCTCTGCATCCTCca RNF181; HSPC238 hsa-miR-615 165 187 ucucCCUCUG-GGUCCGA-GCCu | ||:| ||||||| ||| cgcaGAAGGCACCAGGCTGCGGt RNF181; HSPC238 hsa-miR-617 131 155 CGGUG--GAAGUUUA-CCCUUCaga |:| | |||| : | |||||| GTCTCTACTTCTGTTGGGGAAGgtg RNF181; HSPC238 hsa-miR-619 89 112 UGACCCGUGUUUGUACAGGUCCag |:|| ||||:|| || ||||| ATTGATCACAGACCTGGCCAGGgg RNF181; HSPC238 hsa-miR-621 3 24 UCCAUUCGCGAC-AACGAUCGG |||| :| |||| ||||:||| AGGTTGGGGCTGAGTGCTGGCC RNF181; HSPC238 hsa-miR-623 91 114 uggguUGUCGGGGAC-GUUCCCua |||| ||: | ||:||| tgatcACAGACCTGGCCAGGGGct RNF181; HSPC238 hsa-miR-629 127 152 cGACCCGA-AUG----CAACCCUCUUg | || || ||| |||||| ||| tCAGGTCTCTACTTCTGTTGGG-GAAg RNF181; HSPC238 hsa-miR-634 1 24 cagguUUCAACCC-----CACGACCaa |:|||||| ||||||| ---ggAGGTTGGGGCTGAGTGCTGGcc RNF181; HSPC238 hsa-miR-637 9 30 ugCGUCUCG-GGCUUUCGGGGGUCa || |||: |:| ||||:| | ggGCTGAGTGCTG---GCCCTCTGc RNF181; HSPC238 hsa-miR-639 157 187 ugucgcgAGCGU------UGG--CGUCGCUA ||||| ||| || |||:| tcctaaaTCGCAGAAGGCACCAGGCTGCGGT RNF181; HSPC238 hsa-miR-647 2 26 CUUC--CUUC-ACUCACG-UCGGug ||:| |::| ||||||| :||| GAGGTTGGGGCTGAGTGCTGGCCct RNF181; HSPC238 hsa-miR-648 105 124 uGGU-CACGGGACGUGUGAa ||| | ||:|||||: || gCCAGGGGCTCTGCATCCTc RNF181; HSPC238 hsa-miR-650 99 123 CAGGAC----UCUCGCGACGGAGGA | |||| :|:|| |||| |||| GACCTGGCCAGGGGCTCTGCATCCT RNF181; HSPC238 hsa-miR-658 3 31 ugguugCCUGG---AUGA-AGGGAGGCGg ||:|: |:|| |||||:|| aggttgGGGCTGAGTGCTGGCCCTCTGCg RNF181; HSPC238 hsa-miR-661 92 112 ugcGCGUCCGGUCUCUGGGUCCgu | ||| || | | ||||| gatCACAGACCTG-G--CCAGGgg RNF181; HSPC238 hsa-miR-663 177 201 cgCCAGGGCGCC-----GCGGGGCGga || |:|||| | |||:|| caGG--CTGCGGTTTTCCTCCCTGCtg RNF181; HSPC238 hsa-miR-668 1 21 cauCACCCGGCUCGGCUCACugu | || : |:||:||||| --gGAGGTTGGGGCTGAGTGctg RNF181; HSPC238 hsa-miR-671 100 123 UGGA--GGUCGGGGAGGUCCCGAAGGA |||| |||| |||: || |||| ACCTGGCCAGGGGCTCT---GCATCCT RNF181; HSPC238 hsa-miR-765 106 126 guaguggaaggaagAGGAGGU ||||||| ccaggggctctgcaTCCTCCA RNF181; HSPC238 hsa-miR-766 5 25 CGACUCCGACACCCCGACCuca |:||:||||| | ||||| GTTGGGGCTG-AGTGCTGGccc RNF181; HSPC238 hsa-miR-768-5p 93 128 UAGU-----GA--GG--CAUGA-AAGUAGGAGGUug |||| || || | :|| | ||||||||| ATCACAGACCTGGCCAGGGGCTCTGCATCCTCCAtc RNF181; HSPC238 hsa-miR-769-5p 111 136 uCGAGUCUU---GGGU-CUCCAGAGu |||| | | :||| ||||||| gGCTCTGCATCCTCCATCAGGTCTCt RNF181; HSPC238 hsa-miR-92 2 23 gUCCGGCCCUG-UUCACGuuau |||::|||:| :||||| gAGGTTGGGGCTGAGTGCtggc RNF181; HSPC238 hsa-miR-92b 2 23 CUCCGGCCCUG-CUCACGuuau ||||::|||:| |||||| GAGGTTGGGGCTGAGTGCtggc

DNA & RNA Element - SomamiR Gene Name Mutation Mutation ID miR ID Chromosome Location Ref Alt mirsite mirseed Seed Class Sample Name Cancer Type RNF181 chr2:g.85597531C>T COSN8315437 hsa-miR-2467-3p chr2 85597531 C T tggcCCTCTGCgtct AGCAGAGG m7b TCGA-C8-A3M7-01 [breast][NS][carcinoma][NS] RNF181 chr2:g.85597531C>T COSN8315437 hsa-miR-3166 chr2 85597531 C T tggcccTCTGCGtct CGCAGACA m6a TCGA-C8-A3M7-01 [breast][NS][carcinoma][NS] RNF181 chr2:g.85597531C>T COSN8315437 hsa-miR-330-3p chr2 85597531 C T tggccCTTTGCgtct GCAAAGCA m6a TCGA-C8-A3M7-01 [breast][NS][carcinoma][NS] RNF181 chr2:g.85597531C>T COSN8315437 hsa-miR-3616-3p chr2 85597531 C T tgGCCCTCtgcgtct CGAGGGCA m6b TCGA-C8-A3M7-01 [breast][NS][carcinoma][NS] RNF181 chr2:g.85597531C>T COSN8315437 hsa-miR-3678-3p chr2 85597531 C T tggccCTCTGCgtct CUGCAGAG m6c TCGA-C8-A3M7-01 [breast][NS][carcinoma][NS] RNF181 chr2:g.85597531C>T COSN8315437 hsa-miR-3919 chr2 85597531 C T tggccCTCTGCgtct GCAGAGAA m6a TCGA-C8-A3M7-01 [breast][NS][carcinoma][NS] RNF181 chr2:g.85597531C>T COSN8315437 hsa-miR-4257 chr2 85597531 C T tggcCCTCTGcgtct CCAGAGGU m6b TCGA-C8-A3M7-01 [breast][NS][carcinoma][NS] RNF181 chr2:g.85597531C>T COSN8315437 hsa-miR-4632-5p chr2 85597531 C T tgGCCCTCtgcgtct GAGGGCAG m6a TCGA-C8-A3M7-01 [breast][NS][carcinoma][NS] RNF181 chr2:g.85597531C>T COSN8315437 hsa-miR-4721 chr2 85597531 C T tgGCCCTCtgcgtct UGAGGGCU m6b TCGA-C8-A3M7-01 [breast][NS][carcinoma][NS] RNF181 chr2:g.85597531C>T COSN8315437 hsa-miR-4761-3p chr2 85597531 C T tgGCCCTCtgcgtct GAGGGCAU m6a TCGA-C8-A3M7-01 [breast][NS][carcinoma][NS] RNF181 chr2:g.85597531C>T COSN8315437 hsa-miR-518a-5p chr2 85597531 C T tggccCTTTGCgtct CUGCAAAG m6c TCGA-C8-A3M7-01 [breast][NS][carcinoma][NS] RNF181 chr2:g.85597531C>T COSN8315437 hsa-miR-527 chr2 85597531 C T tggccCTTTGCgtct CUGCAAAG m6c TCGA-C8-A3M7-01 [breast][NS][carcinoma][NS] RNF181 chr2:g.85597531C>T COSN8315437 hsa-miR-548m chr2 85597531 C T tggcCCTTTGcgtct CAAAGGUA m6a TCGA-C8-A3M7-01 [breast][NS][carcinoma][NS] RNF181 chr2:g.85597531C>T COSN8315437 hsa-miR-5681a chr2 85597531 C T tggCCCTTTgcgtct AGAAAGGG m6c TCGA-C8-A3M7-01 [breast][NS][carcinoma][NS] RNF181 chr2:g.85597531C>T COSN8315437 hsa-miR-6767-5p chr2 85597531 C T tggcccTCTGCGtct UCGCAGAC m6b TCGA-C8-A3M7-01 [breast][NS][carcinoma][NS] RNF181 chr2:g.85597531C>T COSN8315437 hsa-miR-6768-3p chr2 85597531 C T tggcCCTTTGcgtct CAAAGGCC m6a TCGA-C8-A3M7-01 [breast][NS][carcinoma][NS] RNF181 chr2:g.85597531C>T COSN8315437 hsa-miR-6847-5p chr2 85597531 C T tggcCCTCTGcgtct ACAGAGGA m6b TCGA-C8-A3M7-01 [breast][NS][carcinoma][NS] RNF181 chr2:g.85597531C>T COSN8315437 hsa-miR-6873-5p chr2 85597531 C T tggCCCTCTGcgtct CAGAGGGA m7a TCGA-C8-A3M7-01 [breast][NS][carcinoma][NS] RNF181 chr2:g.85597531C>T COSN8315437 hsa-miR-759 chr2 85597531 C T tggccCTCTGCgtct GCAGAGUG m6a TCGA-C8-A3M7-01 [breast][NS][carcinoma][NS] RNF181 chr2:g.85597531C>T COSN8315437 hsa-miR-7843-5p chr2 85597531 C T tgGCCCTCtgcgtct GAGGGCAG m6a TCGA-C8-A3M7-01 [breast][NS][carcinoma][NS] RNF181 chr2:g.85595785C>T COSM1471361 hsa-miR-1206 chr2 85595785 C T cgATGAACAcgactg UGUUCAUG m7a TCGA-HC-7231-01 [prostate][NS][carcinoma][adenocarcinoma] RNF181 chr2:g.85595785C>T COSM1471361 hsa-miR-124-5p chr2 85595785 C T cgaTGAACACGactg CGUGUUCA m8a TCGA-HC-7231-01 [prostate][NS][carcinoma][adenocarcinoma] RNF181 chr2:g.85595785C>T COSM1471361 hsa-miR-187-3p chr2 85595785 C T cgatgaACACGActg UCGUGUCU m6a TCGA-HC-7231-01 [prostate][NS][carcinoma][adenocarcinoma] RNF181 chr2:g.85595785C>T COSM1471361 hsa-miR-4255 chr2 85595785 C T cgatGAACACgactg CAGUGUUC m6c TCGA-HC-7231-01 [prostate][NS][carcinoma][adenocarcinoma] RNF181 chr2:g.85595785C>T COSM1471361 hsa-miR-4273 chr2 85595785 C T cgatGAACACgactg GUGUUCUC m6a TCGA-HC-7231-01 [prostate][NS][carcinoma][adenocarcinoma] RNF181 chr2:g.85595785C>T COSM1471361 hsa-miR-4440 chr2 85595785 C T cgatgaaCACGACtg UGUCGUGG m6b TCGA-HC-7231-01 [prostate][NS][carcinoma][adenocarcinoma] RNF181 chr2:g.85595785C>T COSM1471361 hsa-miR-4760-3p chr2 85595785 C T cgATGAATacgactg AAAUUCAU m6c TCGA-HC-7231-01 [prostate][NS][carcinoma][adenocarcinoma] RNF181 chr2:g.85595785C>T COSM1471361 hsa-miR-489-5p chr2 85595785 C T cgatgaATACGACtg GGUCGUAU m7b TCGA-HC-7231-01 [prostate][NS][carcinoma][adenocarcinoma] RNF181 chr2:g.85595785C>T COSM1471361 hsa-miR-506-5p chr2 85595785 C T cgaTGAATAcgactg UAUUCAGG m6a TCGA-HC-7231-01 [prostate][NS][carcinoma][adenocarcinoma] RNF181 chr2:g.85595785C>T COSM1471361 hsa-miR-6074 chr2 85595785 C T cgaTGAATAcgactg GAUAUUCA m6c TCGA-HC-7231-01 [prostate][NS][carcinoma][adenocarcinoma] RNF181 chr2:g.85595785C>T COSM1471361 hsa-miR-630 chr2 85595785 C T cgatGAATACgactg AGUAUUCU m6b TCGA-HC-7231-01 [prostate][NS][carcinoma][adenocarcinoma] RNF181 chr2:g.85595785C>T COSM1471361 hsa-miR-6506-3p chr2 85595785 C T cgatgaATACGActg UCGUAUCA m6a TCGA-HC-7231-01 [prostate][NS][carcinoma][adenocarcinoma] RNF181 chr2:g.85595785C>T COSM1471361 hsa-miR-664a-3p chr2 85595785 C T cgATGAATAcgactg UAUUCAUU m7a TCGA-HC-7231-01 [prostate][NS][carcinoma][adenocarcinoma] RNF181 chr2:g.85595785C>T COSM1471361 hsa-miR-6774-3p chr2 85595785 C T cgatgaACACGActg UCGUGUCC m6a TCGA-HC-7231-01 [prostate][NS][carcinoma][adenocarcinoma] RNF181 chr2:g.85595785C>T COSM1471361 hsa-miR-6853-3p chr2 85595785 C T cgATGAACAcgactg UGUUCAUU m7a TCGA-HC-7231-01 [prostate][NS][carcinoma][adenocarcinoma] RNF181 chr2:g.85595785C>T COSM1471361 hsa-miR-892c-5p chr2 85595785 C T cgaTGAATAcgactg UAUUCAGA m6a TCGA-HC-7231-01 [prostate][NS][carcinoma][adenocarcinoma] RNF181 chr2:g.85595800T>C COSM4628106 hsa-miR-1180-3p chr2 85595800 T C cgagccGCCGGAccc UUUCCGGC m6c Gp2D [large_intestine][colon][carcinoma][adenocarcinoma] RNF181 chr2:g.85595800T>C COSM4628106 hsa-miR-1908-5p chr2 85595800 T C cgagCCGCCGgaccc CGGCGGGG m6a Gp2D [large_intestine][colon][carcinoma][adenocarcinoma] RNF181 chr2:g.85595800T>C COSM4628106 hsa-miR-337-5p chr2 85595800 T C cgAGCCGTcggaccc GAACGGCU m6c Gp2D [large_intestine][colon][carcinoma][adenocarcinoma] RNF181 chr2:g.85595800T>C COSM4628106 hsa-miR-3960 chr2 85595800 T C cgagCCGCCGgaccc GGCGGCGG m6c Gp2D [large_intestine][colon][carcinoma][adenocarcinoma] RNF181 chr2:g.85595800T>C COSM4628106 hsa-miR-4467 chr2 85595800 T C cgaGCCGCCggaccc UGGCGGCG m6b Gp2D [large_intestine][colon][carcinoma][adenocarcinoma] RNF181 chr2:g.85595800T>C COSM4628106 hsa-miR-6770-3p chr2 85595800 T C cgaGCCGCCggaccc CUGGCGGC m6c Gp2D [large_intestine][colon][carcinoma][adenocarcinoma] RNF181 chr2:g.85595800T>C COSM4628106 hsa-miR-8072 chr2 85595800 T C cgagCCGCCGgaccc GGCGGCGG m6c Gp2D [large_intestine][colon][carcinoma][adenocarcinoma] RNF181 chr2:g.85595803G>T COSM3727666 hsa-miR-1178-5p chr2 85595803 G T gccgtcgGACCCTGa CAGGGUCA m7a SMYM-PRGP [skin][sole][malignant_melanoma][acral_lentiginous] RNF181 chr2:g.85595803G>T COSM3727666 hsa-miR-1182 chr2 85595803 G T gccgtcgGACCCTga GAGGGUCU m6b SMYM-PRGP [skin][sole][malignant_melanoma][acral_lentiginous] RNF181 chr2:g.85595803G>T COSM3727666 hsa-miR-1225-5p chr2 85595803 G T gccgtcGTACCCtga GUGGGUAC m6c SMYM-PRGP [skin][sole][malignant_melanoma][acral_lentiginous] RNF181 chr2:g.85595803G>T COSM3727666 hsa-miR-4281 chr2 85595803 G T gccgtcGGACCCtga GGGUCCCG m6a SMYM-PRGP [skin][sole][malignant_melanoma][acral_lentiginous] RNF181 chr2:g.85595803G>T COSM3727666 hsa-miR-555 chr2 85595803 G T gccgtcgTACCCTga AGGGUAAG m6a SMYM-PRGP [skin][sole][malignant_melanoma][acral_lentiginous] RNF181 chr2:g.85595803G>T COSM3727666 hsa-miR-615-5p chr2 85595803 G T gccgtcGGACCCtga GGGGGUCC m6c SMYM-PRGP [skin][sole][malignant_melanoma][acral_lentiginous] RNF181 chr2:g.85595803G>T COSM3727666 hsa-miR-6755-5p chr2 85595803 G T gccgtcgTACCCTga UAGGGUAG m6b SMYM-PRGP [skin][sole][malignant_melanoma][acral_lentiginous] RNF181 chr2:g.85595803G>T COSM3727666 hsa-miR-6841-5p chr2 85595803 G T gccgtcGTACCCTga UAGGGUAC m7b SMYM-PRGP [skin][sole][malignant_melanoma][acral_lentiginous] RNF181 chr2:g.85595813AGG>AAA COSM4566984 hsa-miR-1178-3p chr2 85595813 AGG AAA ccTGAGCAAaagacgcg UUGCUCAC m7a CSCC-55-T [skin][head_neck][carcinoma][squamous_cell_carcinoma] RNF181 chr2:g.85595813AGG>AAA COSM4566984 hsa-miR-1200 chr2 85595813 AGG AAA cctgagCAGGAGacgcg CUCCUGAG m6a CSCC-55-T [skin][head_neck][carcinoma][squamous_cell_carcinoma] RNF181 chr2:g.85595813AGG>AAA COSM4566984 hsa-miR-129-5p chr2 85595813 AGG AAA cctgaGCAAAAgacgcg CUUUUUGC m6c CSCC-55-T [skin][head_neck][carcinoma][squamous_cell_carcinoma] RNF181 chr2:g.85595813AGG>AAA COSM4566984 hsa-miR-1343-3p chr2 85595813 AGG AAA cctgagCAGGAGacgcg CUCCUGGG m6a CSCC-55-T [skin][head_neck][carcinoma][squamous_cell_carcinoma] RNF181 chr2:g.85595813AGG>AAA COSM4566984 hsa-miR-1539 chr2 85595813 AGG AAA cctgaGCAGGAgacgcg UCCUGCGC m6a CSCC-55-T [skin][head_neck][carcinoma][squamous_cell_carcinoma] RNF181 chr2:g.85595813AGG>AAA COSM4566984 hsa-miR-1976 chr2 85595813 AGG AAA cctgaGCAGGAGacgcg CCUCCUGC m7b CSCC-55-T [skin][head_neck][carcinoma][squamous_cell_carcinoma] RNF181 chr2:g.85595813AGG>AAA COSM4566984 hsa-miR-19a-5p chr2 85595813 AGG AAA cctgaGCAAAAgacgcg AGUUUUGC m6c CSCC-55-T [skin][head_neck][carcinoma][squamous_cell_carcinoma] RNF181 chr2:g.85595813AGG>AAA COSM4566984 hsa-miR-19b-1-5p chr2 85595813 AGG AAA cctgaGCAAAAgacgcg AGUUUUGC m6c CSCC-55-T [skin][head_neck][carcinoma][squamous_cell_carcinoma] RNF181 chr2:g.85595813AGG>AAA COSM4566984 hsa-miR-19b-2-5p chr2 85595813 AGG AAA cctgaGCAAAAgacgcg AGUUUUGC m6c CSCC-55-T [skin][head_neck][carcinoma][squamous_cell_carcinoma] RNF181 chr2:g.85595813AGG>AAA COSM4566984 hsa-miR-3074-5p chr2 85595813 AGG AAA cctgaGCAGGAgacgcg GUUCCUGC m6c CSCC-55-T [skin][head_neck][carcinoma][squamous_cell_carcinoma] RNF181 chr2:g.85595813AGG>AAA COSM4566984 hsa-miR-3140-3p chr2 85595813 AGG AAA cctgagCAAAAGacgcg AGCUUUUG m6c CSCC-55-T [skin][head_neck][carcinoma][squamous_cell_carcinoma] RNF181 chr2:g.85595813AGG>AAA COSM4566984 hsa-miR-3193 chr2 85595813 AGG AAA cctgaGCAGGAgacgcg UCCUGCGU m6a CSCC-55-T [skin][head_neck][carcinoma][squamous_cell_carcinoma] RNF181 chr2:g.85595813AGG>AAA COSM4566984 hsa-miR-3653-5p chr2 85595813 AGG AAA cctgagCAGGAGacgcg CCUCCUGA m6b CSCC-55-T [skin][head_neck][carcinoma][squamous_cell_carcinoma] RNF181 chr2:g.85595813AGG>AAA COSM4566984 hsa-miR-3680-3p chr2 85595813 AGG AAA cctgaGCAAAAgacgcg UUUUGCAU m6a CSCC-55-T [skin][head_neck][carcinoma][squamous_cell_carcinoma] RNF181 chr2:g.85595813AGG>AAA COSM4566984 hsa-miR-3692-5p chr2 85595813 AGG AAA cctgAGCAGGagacgcg CCUGCUGG m6a CSCC-55-T [skin][head_neck][carcinoma][squamous_cell_carcinoma] RNF181 chr2:g.85595813AGG>AAA COSM4566984 hsa-miR-370-3p chr2 85595813 AGG AAA cctgAGCAGGagacgcg GCCUGCUG m6b CSCC-55-T [skin][head_neck][carcinoma][squamous_cell_carcinoma] RNF181 chr2:g.85595813AGG>AAA COSM4566984 hsa-miR-378a-5p chr2 85595813 AGG AAA cctgagCAGGAGacgcg CUCCUGAC m6a CSCC-55-T [skin][head_neck][carcinoma][squamous_cell_carcinoma] RNF181 chr2:g.85595813AGG>AAA COSM4566984 hsa-miR-3934-3p chr2 85595813 AGG AAA CCTGAGCAggagacgcg UGCUCAGG m8a CSCC-55-T [skin][head_neck][carcinoma][squamous_cell_carcinoma] RNF181 chr2:g.85595813AGG>AAA COSM4566984 hsa-miR-4279 chr2 85595813 AGG AAA cctgagcAGGAGAcgcg CUCUCCUC m6b CSCC-55-T [skin][head_neck][carcinoma][squamous_cell_carcinoma] RNF181 chr2:g.85595813AGG>AAA COSM4566984 hsa-miR-450a-5p chr2 85595813 AGG AAA cctgaGCAAAAgacgcg UUUUGCGA m6a CSCC-55-T [skin][head_neck][carcinoma][squamous_cell_carcinoma] RNF181 chr2:g.85595813AGG>AAA COSM4566984 hsa-miR-450b-5p chr2 85595813 AGG AAA cctgaGCAAAAgacgcg UUUUGCAA m6a CSCC-55-T [skin][head_neck][carcinoma][squamous_cell_carcinoma] RNF181 chr2:g.85595813AGG>AAA COSM4566984 hsa-miR-507 chr2 85595813 AGG AAA cctgaGCAAAAgacgcg UUUUGCAC m6a CSCC-55-T [skin][head_neck][carcinoma][squamous_cell_carcinoma] RNF181 chr2:g.85595813AGG>AAA COSM4566984 hsa-miR-5691 chr2 85595813 AGG AAA cctGAGCAAaagacgcg UUGCUCUG m6a CSCC-55-T [skin][head_neck][carcinoma][squamous_cell_carcinoma] RNF181 chr2:g.85595813AGG>AAA COSM4566984 hsa-miR-627-3p chr2 85595813 AGG AAA cctgagcAAAAGAcgcg UCUUUUCU m6a CSCC-55-T [skin][head_neck][carcinoma][squamous_cell_carcinoma] RNF181 chr2:g.85595813AGG>AAA COSM4566984 hsa-miR-660-3p chr2 85595813 AGG AAA cctgagCAGGAGacgcg ACCUCCUG m6c CSCC-55-T [skin][head_neck][carcinoma][squamous_cell_carcinoma] RNF181 chr2:g.85595813AGG>AAA COSM4566984 hsa-miR-6727-3p chr2 85595813 AGG AAA cctgaGCAGGAgacgcg UCCUGCCA m6a CSCC-55-T [skin][head_neck][carcinoma][squamous_cell_carcinoma] RNF181 chr2:g.85595813AGG>AAA COSM4566984 hsa-miR-6747-3p chr2 85595813 AGG AAA cctgaGCAGGAgacgcg UCCUGCCU m6a CSCC-55-T [skin][head_neck][carcinoma][squamous_cell_carcinoma] RNF181 chr2:g.85595813AGG>AAA COSM4566984 hsa-miR-6772-3p chr2 85595813 AGG AAA cctGAGCAAaagacgcg UUGCUCCU m6a CSCC-55-T [skin][head_neck][carcinoma][squamous_cell_carcinoma] RNF181 chr2:g.85595813AGG>AAA COSM4566984 hsa-miR-6805-3p chr2 85595813 AGG AAA cctGAGCAAaagacgcg UUGCUCUG m6a CSCC-55-T [skin][head_neck][carcinoma][squamous_cell_carcinoma] RNF181 chr2:g.85595813AGG>AAA COSM4566984 hsa-miR-6828-3p chr2 85595813 AGG AAA cctGAGCAGgagacgcg AUCUGCUC m6c CSCC-55-T [skin][head_neck][carcinoma][squamous_cell_carcinoma] RNF181 chr2:g.85595813AGG>AAA COSM4566984 hsa-miR-6845-3p chr2 85595813 AGG AAA cctgagcAGGAGAcgcg CCUCUCCU m6c CSCC-55-T [skin][head_neck][carcinoma][squamous_cell_carcinoma] RNF181 chr2:g.85595813AGG>AAA COSM4566984 hsa-miR-6885-3p chr2 85595813 AGG AAA cctgAGCAAAagacgcg CUUUGCUU m6b CSCC-55-T [skin][head_neck][carcinoma][squamous_cell_carcinoma] RNF181 chr2:g.85595813AGG>AAA COSM4566984 hsa-miR-6893-3p chr2 85595813 AGG AAA cctgAGCAGGagacgcg CCCUGCUG m6b CSCC-55-T [skin][head_neck][carcinoma][squamous_cell_carcinoma] RNF181 chr2:g.85595813AGG>AAA COSM4566984 hsa-miR-767-3p chr2 85595813 AGG AAA ccTGAGCAGgagacgcg UCUGCUCA m7b CSCC-55-T [skin][head_neck][carcinoma][squamous_cell_carcinoma] RNF181 chr2:g.85595825C>T COSM4722061 hsa-miR-1267 chr2 85595825 C T acgcgaaTCAACAtg CCUGUUGA m6c T3024 [large_intestine][colon][carcinoma][adenocarcinoma] RNF181 chr2:g.85595825C>T COSM4722061 hsa-miR-182-3p chr2 85595825 C T acgcGAACCAacatg UGGUUCUA m6a T3024 [large_intestine][colon][carcinoma][adenocarcinoma] RNF181 chr2:g.85595825C>T COSM4722061 hsa-miR-203a-5p chr2 85595825 C T acgcGAACCAacatg AGUGGUUC m6c T3024 [large_intestine][colon][carcinoma][adenocarcinoma] RNF181 chr2:g.85595825C>T COSM4722061 hsa-miR-218-1-3p chr2 85595825 C T acgcGAACCAacatg AUGGUUCC m6b T3024 [large_intestine][colon][carcinoma][adenocarcinoma] RNF181 chr2:g.85595825C>T COSM4722061 hsa-miR-218-2-3p chr2 85595825 C T acgcGAACCAacatg CAUGGUUC m6c T3024 [large_intestine][colon][carcinoma][adenocarcinoma] RNF181 chr2:g.85595825C>T COSM4722061 hsa-miR-4425 chr2 85595825 C T acgcgaaCCAACAtg UGUUGGGA m6a T3024 [large_intestine][colon][carcinoma][adenocarcinoma] RNF181 chr2:g.85595825C>T COSM4722061 hsa-miR-4781-3p chr2 85595825 C T acgcgaaCCAACATg AAUGUUGG m7b T3024 [large_intestine][colon][carcinoma][adenocarcinoma] RNF181 chr2:g.85595825C>T COSM4722061 hsa-miR-597-3p chr2 85595825 C T acgcGAACCAacatg UGGUUCUC m6a T3024 [large_intestine][colon][carcinoma][adenocarcinoma] RNF181 chr2:g.85595825C>T COSM4722061 hsa-miR-653-5p chr2 85595825 C T acgcgaaTCAACAtg GUGUUGAA m6b T3024 [large_intestine][colon][carcinoma][adenocarcinoma] RNF181 chr2:g.85595825C>T COSM4722061 hsa-miR-659-3p chr2 85595825 C T acgcGAACCAAcatg CUUGGUUC m7b T3024 [large_intestine][colon][carcinoma][adenocarcinoma] RNF181 chr2:g.85595825C>T COSM4722061 hsa-miR-1267 chr2 85595825 C T acgcgaaTCAACAtg CCUGUUGA m6c T3024 [large_intestine][colon][carcinoma][adenocarcinoma] RNF181 chr2:g.85595825C>T COSM4722061 hsa-miR-182-3p chr2 85595825 C T acgcGAACCAacatg UGGUUCUA m6a T3024 [large_intestine][colon][carcinoma][adenocarcinoma] RNF181 chr2:g.85595825C>T COSM4722061 hsa-miR-203a-5p chr2 85595825 C T acgcGAACCAacatg AGUGGUUC m6c T3024 [large_intestine][colon][carcinoma][adenocarcinoma] RNF181 chr2:g.85595825C>T COSM4722061 hsa-miR-218-1-3p chr2 85595825 C T acgcGAACCAacatg AUGGUUCC m6b T3024 [large_intestine][colon][carcinoma][adenocarcinoma] RNF181 chr2:g.85595825C>T COSM4722061 hsa-miR-218-2-3p chr2 85595825 C T acgcGAACCAacatg CAUGGUUC m6c T3024 [large_intestine][colon][carcinoma][adenocarcinoma] RNF181 chr2:g.85595825C>T COSM4722061 hsa-miR-4425 chr2 85595825 C T acgcgaaCCAACAtg UGUUGGGA m6a T3024 [large_intestine][colon][carcinoma][adenocarcinoma] RNF181 chr2:g.85595825C>T COSM4722061 hsa-miR-4781-3p chr2 85595825 C T acgcgaaCCAACATg AAUGUUGG m7b T3024 [large_intestine][colon][carcinoma][adenocarcinoma] RNF181 chr2:g.85595825C>T COSM4722061 hsa-miR-597-3p chr2 85595825 C T acgcGAACCAacatg UGGUUCUC m6a T3024 [large_intestine][colon][carcinoma][adenocarcinoma] RNF181 chr2:g.85595825C>T COSM4722061 hsa-miR-653-5p chr2 85595825 C T acgcgaaTCAACAtg GUGUUGAA m6b T3024 [large_intestine][colon][carcinoma][adenocarcinoma] RNF181 chr2:g.85595825C>T COSM4722061 hsa-miR-659-3p chr2 85595825 C T acgcGAACCAAcatg CUUGGUUC m7b T3024 [large_intestine][colon][carcinoma][adenocarcinoma] RNF181 chr2:g.85597148C>T COSM2822677 hsa-miR-136-3p chr2 85597148 C T ctGATGATGacactt CAUCAUCG m7a NCI-H747 [large_intestine][colon][carcinoma][adenocarcinoma] RNF181 chr2:g.85597148C>T COSM2822677 hsa-miR-215-3p chr2 85597148 C T ctgatgATGACActt UCUGUCAU m6c NCI-H747 [large_intestine][colon][carcinoma][adenocarcinoma] RNF181 chr2:g.85597148C>T COSM2822677 hsa-miR-4440 chr2 85597148 C T ctgatgACGACActt UGUCGUGG m6a NCI-H747 [large_intestine][colon][carcinoma][adenocarcinoma] RNF181 chr2:g.85597148C>T COSM2822677 hsa-miR-592 chr2 85597148 C T ctgatgaTGACACtt UUGUGUCA m6c NCI-H747 [large_intestine][colon][carcinoma][adenocarcinoma] RNF181 chr2:g.85597148C>T COSM2822677 hsa-miR-597-5p chr2 85597148 C T ctgatgaTGACACtt UGUGUCAC m6b NCI-H747 [large_intestine][colon][carcinoma][adenocarcinoma] RNF181 chr2:g.85597148C>T COSM2822677 hsa-miR-598-3p chr2 85597148 C T ctgATGACGacactt UACGUCAU m6c NCI-H747 [large_intestine][colon][carcinoma][adenocarcinoma] RNF181 chr2:g.85597148C>T COSM2822677 hsa-miR-136-3p chr2 85597148 C T ctGATGATGacactt CAUCAUCG m7a NCI-H747 [large_intestine][colon][carcinoma][adenocarcinoma] RNF181 chr2:g.85597148C>T COSM2822677 hsa-miR-215-3p chr2 85597148 C T ctgatgATGACActt UCUGUCAU m6c NCI-H747 [large_intestine][colon][carcinoma][adenocarcinoma] RNF181 chr2:g.85597148C>T COSM2822677 hsa-miR-4440 chr2 85597148 C T ctgatgACGACActt UGUCGUGG m6a NCI-H747 [large_intestine][colon][carcinoma][adenocarcinoma] RNF181 chr2:g.85597148C>T COSM2822677 hsa-miR-592 chr2 85597148 C T ctgatgaTGACACtt UUGUGUCA m6c NCI-H747 [large_intestine][colon][carcinoma][adenocarcinoma] RNF181 chr2:g.85597148C>T COSM2822677 hsa-miR-597-5p chr2 85597148 C T ctgatgaTGACACtt UGUGUCAC m6b NCI-H747 [large_intestine][colon][carcinoma][adenocarcinoma] RNF181 chr2:g.85597148C>T COSM2822677 hsa-miR-598-3p chr2 85597148 C T ctgATGACGacactt UACGUCAU m6c NCI-H747 [large_intestine][colon][carcinoma][adenocarcinoma] RNF181 chr2:g.85597171G>A COSM4722062 hsa-miR-3655 chr2 85597171 G A cacaGACAAGataag GCUUGUCG m6b T3262 [large_intestine][caecum][carcinoma][adenocarcinoma] RNF181 chr2:g.85597171G>A COSM4722062 hsa-miR-4288 chr2 85597171 G A caCAGACAAgataag UUGUCUGC m7a T3262 [large_intestine][caecum][carcinoma][adenocarcinoma] RNF181 chr2:g.85597171G>A COSM4722062 hsa-miR-578 chr2 85597171 G A cacagACAAGAtaag CUUCUUGU m6c T3262 [large_intestine][caecum][carcinoma][adenocarcinoma] RNF181 chr2:g.85597171G>A COSM4722062 hsa-miR-581 chr2 85597171 G A cacagACAAGAtaag UCUUGUGU m6a T3262 [large_intestine][caecum][carcinoma][adenocarcinoma] RNF181 chr2:g.85597171G>A COSM4722062 hsa-miR-6818-3p chr2 85597171 G A cacAGACAAgataag UUGUCUCU m6a T3262 [large_intestine][caecum][carcinoma][adenocarcinoma]

DNA & RNA Element - miRcode Gene Name Type microRNA Seed Position Seed Type Total Cons% Tr Region RNF181 High_conserved miR-7/7ab chr2:85824665 7-mer-m8 18 3pUTR, CDS RNF181 High_conserved miR-138/138ab chr2:85823717 7-mer-m8 24 CDS, ncRNA RNF181 High_conserved miR-142-3p chr2:85824213 7-mer-m8 7 CDS RNF181 High_conserved miR-150/5127 chr2:85823901 7-mer-m8 13 CDS, ncRNA RNF181 High_conserved miR-150/5127 chr2:85824160 7-mer-m8 27 CDS RNF181 High_conserved miR-15abc/16/16abc/195/322/424/497/1907 chr2:85822961 7-mer-m8 33 CDS, ncRNA RNF181 High_conserved miR-1ab/206/613 chr2:85824028 7-mer-A1 51 3pUTR, CDS, ncRNA RNF181 High_conserved miR-221/222/222ab/1928 chr2:85823915 7-mer-A1 24 CDS, ncRNA RNF181 High_conserved miR-31 chr2:85824011 7-mer-A1 47 3pUTR, CDS, ncRNA RNF181 High_conserved miR-103a/107/107ab chr2:85822960 7-mer-m8 33 CDS, ncRNA RNF181 High_conserved miR-338/338-3p chr2:85822963 7-mer-A1 51 CDS, ncRNA RNF181 High_conserved miR-33ab/33-5p chr2:85824463 7-mer-m8 13 3pUTR RNF181 High_conserved miR-34ac/34bc-5p/449abc/449c-5p chr2:85823995 7-mer-A1 36 CDS, ncRNA RNF181 High_conserved miR-383 chr2:85823928 7-mer-A1 40 CDS, ncRNA RNF181 Medium_conserved miR-504/4725-5p chr2:85822858 7-mer-m8 9 5pUTR, ncRNA RNF181 Medium_conserved miR-539/539-5p chr2:85824225 7-mer-A1 18 CDS RNF181 Medium_conserved miR-149 chr2:85823830 7-mer-A1 22 ncRNA RNF181 Medium_conserved miR-149 chr2:85824491 7-mer-m8 9 3pUTR RNF181 Medium_conserved miR-186 chr2:85823792 7-mer-m8 18 ncRNA RNF181 Medium_conserved miR-186 chr2:85824699 7-mer-A1 38 3pUTR RNF181 Medium_conserved miR-197 chr2:85824447 7-mer-m8 0 3pUTR RNF181 Medium_conserved miR-224 chr2:85824434 7-mer-m8 27 3pUTR RNF181 Medium_conserved miR-370 chr2:85822939 7-mer-A1 27 CDS, ncRNA RNF181 Medium_conserved miR-370 chr2:85824385 8-mer 29 3pUTR RNF181 Medium_conserved miR-431 chr2:85824229 8-mer 64 3pUTR, CDS RNF181 Medium_conserved miR-485-5p/1698/1703/1962 chr2:85824454 7-mer-A1 16 3pUTR

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score RNF181 RAID00213164 hsa-miR-92b-3p miRNA MIMAT0003218 RNF181 mRNA 51255 CLASH 0.5483 RNF181 RAID00647207 hsa-miR-615-3p miRNA MIMAT0003283 RNF181 mRNA 51255 Prediction 0.1828 RNF181 RAID00800073 hsa-miR-491-5p miRNA MIMAT0002807 RNF181 mRNA 51255 CLIP-seq 0.5483 RNF181 RAID00883245 hsa-miR-493-5p miRNA MIMAT0002813 RNF181 mRNA 51255 Prediction 0.1828 RNF181 RAID01272875 hsa-miR-6769a-5p miRNA MIMAT0027438 RNF181 mRNA 51255 Prediction 0.1828 RNF181 RAID01614233 hsa-miR-7-5p miRNA MIMAT0000252 RNF181 mRNA 51255 CLIP-seq//Prediction 0.6308 RNF181 RAID01631691 hsa-miR-6793-3p miRNA MIMAT0027487 RNF181 mRNA 51255 Prediction 0.1828 RNF181 RAID01767155 hsa-miR-186-5p miRNA MIMAT0000456 RNF181 mRNA 51255 Prediction 0.1828 RNF181 RAID02224164 hsa-miR-6769b-5p miRNA MIMAT0027620 RNF181 mRNA 51255 Prediction 0.1828 RNF181 RAID03139784 hsa-miR-525-3p miRNA MIMAT0002839 RNF181 mRNA 51255 CLIP-seq 0.5483 RNF181 RAID03192577 hsa-miR-877-3p miRNA MIMAT0004950 RNF181 mRNA 51255 CLASH 0.5483 RNF181 RAID03542091 ebv-miR-BART5-5p miRNA MIMAT0003413 RNF181 mRNA 51255 PAR-CLIP 0.5483