SNP - dbSNP |
dbSNP | Type | Alleles | Het | Se(het) | Fxn-class | Gene Name | Assembly | Chr-pos | Sequence | Entrez Gene |
rs4228693 | snp | A/G | 0.21875 | 0.248039 | intron-variant | Sqstm1 | Mm_Celera | 11:50201560 | CTTTTGGCTTTCTGG[A/G]AACTCAAAATTCTGG | 18412 |
rs4228694 | snp | G/T | 0.21875 | 0.248039 | intron-variant | Sqstm1 | Mm_Celera | 11:50201590 | GGCCTCATTTGCAGT[G/T]TAAGTACCTTATCCG | 18412 |
rs4228695 | snp | A/G | 0.21875 | 0.248039 | intron-variant | Sqstm1 | Mm_Celera | 11:50201608 | AGTACCTTATCCGAT[A/G]AGCCAGTTCTACAGC | 18412 |
rs4228696 | snp | G/T | 0.21875 | 0.248039 | intron-variant | Sqstm1 | Mm_Celera | 11:50201643 | ATAACCTGCCTTTTG[G/T]TTTTTGTTTTGTTTT | 18412 |
rs4228697 | snp | A/T | 0.21875 | 0.248039 | intron-variant | Sqstm1 | Mm_Celera | 11:50201787 | GCACCTCCCCTAGAC[A/T]CTCACCCATGCAGCA | 18412 |
rs13460938 | snp | C/T | | | missense | Sqstm1 | Mm_Celera | 11:50210650 | GGAGGCGGAAGCCCA[C/T]GCCGCGGCCGGCCCG | 18412 |
rs26952048 | snp | A/G | 0.493827 | 0.0552116 | upstream-variant-2KB | Sqstm1 | GRCm38.p3 | 11:50212768 | ATTTCCCTGGTGGCT[A/G]GAAGGTACACACCTA | 18412 |
rs26952049 | snp | C/G | 0.42 | 0.183303 | upstream-variant-2KB | Sqstm1 | Mm_Celera | 11:50211030 | GTTGGGAAAAGGACC[C/G]GTAAGTATCGAGCCT | 18412 |
rs26952050 | snp | C/T | 0.197531 | 0.244432 | intron-variant | Sqstm1 | Mm_Celera | 11:50210433 | GGATGTTAGATGTAA[C/T]CTGAGCGGCCGCCTG | 18412 |
rs26952051 | snp | C/T | 0.18 | 0.24 | intron-variant | Sqstm1 | Mm_Celera | 11:50210388 | TAACTGAACCCACCA[C/T]CGGGCGTTACGGGGA | 18412 |
rs26952052 | snp | A/T | 0.142012 | 0.225474 | intron-variant | Sqstm1 | Mm_Celera | 11:50210029 | TTGGAGTGATTGAGG[A/T]CGGCCTAAACCACTC | 18412 |
rs26952053 | snp | C/T | 0.375 | 0.216506 | intron-variant | Sqstm1 | Mm_Celera | 11:50208891 | GTTGGGTCTCCAGGA[C/T]CTGCAGCTGTGATGA | 18412 |
rs26952054 | snp | C/G | 0.197531 | 0.244432 | intron-variant | Sqstm1 | Mm_Celera | 11:50208752 | TGGATGAGCCGCCTT[C/G]GTGCTGGGATTACAA | 18412 |
rs26952055 | snp | C/T | 0.21875 | 0.248039 | intron-variant | Sqstm1 | Mm_Celera | 11:50208069 | CCAGTGGTAAAGGGA[C/T]ATCTACTAAGGCTCT | 18412 |
rs26952056 | snp | C/T | 0.493827 | 0.0552116 | intron-variant | Sqstm1 | Mm_Celera | 11:50206936 | TACCATGGATAAGGA[C/T]AGAGTGTAGCACAAA | 18412 |
rs26952057 | snp | A/G | 0.375 | 0.216506 | intron-variant | Sqstm1 | Mm_Celera | 11:50205594 | AACCTTGCTGGAGTC[A/G]AGCACACATATCTGC | 18412 |
rs26952058 | snp | G/T | 0.5 | 0 | intron-variant | Sqstm1 | Mm_Celera | 11:50205259 | TCTCAGAGAGGCTTG[G/T]GAGAAAACAAATCCC | 18412 |
rs26952059 | snp | A/G | 0.18 | 0.24 | intron-variant | Sqstm1 | Mm_Celera | 11:50205125 | GTGTGTCCAACAGCC[A/G]GTGCCTAGCATCACA | 18412 |
rs26952060 | snp | A/G | 0.197531 | 0.244432 | intron-variant | Sqstm1 | Mm_Celera | 11:50204754 | CTAAGGCCATGGTCT[A/G]ACTGAACTGCCCTGT | 18412 |
rs26952061 | snp | C/T | 0.231111 | 0.249285 | intron-variant | Sqstm1 | Mm_Celera | 11:50204181 | ACTGTGTAAATGTTG[C/T]TTGCACTGGGCTTGT | 18412 |
rs26952062 | snp | C/G | 0.132653 | 0.220748 | intron-variant | Sqstm1 | Mm_Celera | 11:50203877 | GGTTCAAGTTCTCAT[C/G]TGTTTACTTCCTACC | 18412 |
rs26952063 | snp | A/C/T | 0.231111 | 0.249285 | intron-variant | Sqstm1 | Mm_Celera | 11:50203813 | CAACCACACACCAAC[A/C/T]GACCCCGAGTCCCAC | 18412 |
rs26952064 | snp | A/C | 0.132653 | 0.220748 | intron-variant | Sqstm1 | Mm_Celera | 11:50203785 | AGCACCCACAGCTTC[A/C]ACAGTCCCTTCCCAA | 18412 |
rs26952065 | snp | C/G | 0.231111 | 0.249285 | intron-variant | Sqstm1 | Mm_Celera | 11:50203720 | TGTAGCGGCCTGCCC[C/G]TGTTTGTAGTAGGAG | 18412 |
rs26952066 | snp | A/C | 0.124444 | 0.216185 | intron-variant | Sqstm1 | Mm_Celera | 11:50203683 | GAGTGTGTGGCCCTG[A/C]GGCTGGAGAGCACCC | 18412 |
rs26952067 | snp | A/G | 0.124444 | 0.216185 | intron-variant | Sqstm1 | Mm_Celera | 11:50203379 | CACATAGCTCTAGGT[A/G]ACCAGATAACTATGT | 18412 |
rs26952068 | snp | C/G | 0.231111 | 0.249285 | intron-variant | Sqstm1 | Mm_Celera | 11:50203123 | CAGATTAGGACACGG[C/G]CGGCCAGCATAAGGA | 18412 |
rs26952069 | snp | C/T | 0.231111 | 0.249285 | intron-variant | Sqstm1 | Mm_Celera | 11:50202805 | TCAGGCTGAAGCTAG[C/T]AGACCTACCTCTGGC | 18412 |
rs26952070 | snp | A/G | 0.132653 | 0.220748 | intron-variant | Sqstm1 | Mm_Celera | 11:50202793 | GGACAGGATTCCTCA[A/G]GCTGAAGCTAGTAGA | 18412 |
rs26952071 | snp | A/G/T | 0.231111 | 0.249285 | intron-variant | Sqstm1 | GRCm38.p3 | 11:50202768 | CAGGAGGCTCAGGGT[A/G/T]ACAGTAGAAGGACAG | 18412 |
rs26952072 | snp | C/T | 0.124444 | 0.216185 | intron-variant | Sqstm1 | Mm_Celera | 11:50202713 | CTGTATGATGAGTTA[C/T]AGCTCCAGAGCTAAG | 18412 |
rs26952073 | snp | A/G | 0.152778 | 0.230321 | intron-variant | Sqstm1 | Mm_Celera | 11:50202371 | CTGAAAGCAAAGAAG[A/G]AAAATGAAACTTCTG | 18412 |
rs26952074 | snp | C/G | 0.231111 | 0.249285 | intron-variant | Sqstm1 | Mm_Celera | 11:50201980 | TTACACACACTGCTG[C/G]CTGGCTGGGGCCTTG | 18412 |
rs26952075 | snp | A/T | 0.132653 | 0.220748 | intron-variant | Sqstm1 | Mm_Celera | 11:50201852 | CCCTTTGAAGTCCAA[A/T]CAGCAGATCTGGCCC | 18412 |
rs26952076 | snp | C/G | 0.132653 | 0.220748 | intron-variant | Sqstm1 | Mm_Celera | 11:50201696 | CCATCCCAGAGCCTT[C/G]CACATTTGAGCTAAA | 18412 |
rs26952077 | snp | A/G | 0.132653 | 0.220748 | intron-variant | Sqstm1 | Mm_Celera | 11:50201605 | GTAAGTACCTTATCC[A/G]ATGAGCCAGTTCTAC | 18412 |
rs26952078 | snp | G/T | 0.244898 | 0.249948 | intron-variant | Sqstm1 | Mm_Celera | 11:50201515 | CCTCCTAAGGCCTGG[G/T]ACTATAGACAGCTGC | 18412 |
rs26952079 | snp | C/T | 0.124444 | 0.216185 | intron-variant | Sqstm1 | Mm_Celera | 11:50201476 | ACCAATCCCACTGAG[C/T]CACTTGTACAGGAAG | 18412 |
rs26952080 | snp | C/T | 0.231111 | 0.249285 | utr-variant-3-prime | Sqstm1 | GRCm38.p3 | 11:50200742 | AGCCCTGCTGCTCTA[C/T]GTGATGCAACTACAA | 18412 |
rs26952081 | snp | C/T | 0.231111 | 0.249285 | utr-variant-3-prime | Sqstm1 | Mm_Celera | 11:50200635 | GCACATTCAAAACTC[C/T]CCTCATGCACTTTCC | 18412 |
rs26952082 | snp | C/T | 0.48 | 0.0979796 | utr-variant-3-prime, intron-variant, downstream-variant-500B | Sqstm1, 3010026O09Rik | GRCm38.p3 | 11:50200329 | ACATGAATTCTCCAT[C/T]CCCTAGGAGCTGTAG | 18412 |
rs26952083 | snp | A/T | 0.408163 | 0.193609 | utr-variant-3-prime, intron-variant, downstream-variant-500B | Sqstm1, 3010026O09Rik | Mm_Celera | 11:50200290 | AAGGGGGACAGTATA[A/T]GATAAGATCCTTCAT | 18412 |
rs211717437 | snp | C/T | | | upstream-variant-2KB | Sqstm1 | GRCm38.p3 | 11:50211910 | GGAGATTTAGCTTAG[C/T]AGGGATACAGCTTAT | 18412 |
rs211819439 | snp | A/G | | | upstream-variant-2KB | Sqstm1 | Mm_Celera | 11:50211198 | ACAGGATGCTATTCC[A/G]ACCCTCCTAAACATA | 18412 |
rs211846374 | snp | A/G | | | intron-variant | Sqstm1 | Mm_Celera | 11:50202721 | TGAGTTACAGCTCCA[A/G]AGCTAAGTAAATTTT | 18412 |
rs211980452 | snp | A/G | | | intron-variant | Sqstm1 | Mm_Celera | 11:50203395 | ACCAGATAACTATGT[A/G]ACATGACAGACCATG | 18412 |
rs212188080 | snp | A/G | | | downstream-variant-500B, synonymous-codon | Sqstm1, 3010026O09Rik | Mm_Celera | 11:50199862 | CACTACCACCCCACA[A/G]CTGGACAGACCTGAC | 18412 |
rs212471549 | snp | G/T | | | utr-variant-3-prime, intron-variant, downstream-variant-500B | Sqstm1, 3010026O09Rik | Mm_Celera | 11:50200154 | CGGATCACAGGGCTG[G/T]TTAAAGTGCATATGC | 18412 |
rs212678200 | snp | G/T | | | intron-variant | Sqstm1 | Mm_Celera | 11:50208450 | TCTTGGGTTTTTTGG[G/T]GTTTTTTTGTTTTGT | 18412 |
rs213082729 | snp | A/G | | | intron-variant | Sqstm1 | Mm_Celera | 11:50204358 | CAGGCCCTCCACAAC[A/G]CATATGGGATTTGGC | 18412 |
rs213582921 | snp | C/G | | | upstream-variant-2KB | Sqstm1 | Mm_Celera | 11:50210898 | GCTGGGGCGGCCGCT[C/G]GAGCCCCCTTGATGG | 18412 |
rs213587190 | snp | A/G | | | intron-variant | Sqstm1 | Mm_Celera | 11:50205728 | GCACTATCAGGAGGC[A/G]TGGCTTTGTTGGAGG | 18412 |
rs213714823 | snp | C/T | | | intron-variant | Sqstm1 | Mm_Celera | 11:50205033 | CTGACACAGCCTTTG[C/T]ACAGGTTCCTGTGGC | 18412 |
rs213901970 | snp | C/G | | | intron-variant | Sqstm1 | Mm_Celera | 11:50205757 | GGAAGTGAGTCACTA[C/G]GGTGGGCTTTGAGGG | 18412 |
rs214017232 | snp | A/C | | | downstream-variant-500B | Sqstm1, 3010026O09Rik | Mm_Celera | 11:50200139 | GCTGCTACACTCGTA[A/C]GGATCACAGGGCTGG | 18412 |
rs214090717 | snp | A/T | | | intron-variant | Sqstm1 | Mm_Celera | 11:50209829 | AGATGACTCAGAAGG[A/T]CAATTTAGAGATACA | 18412 |
rs214262022 | snp | C/T | | | intron-variant | Sqstm1 | Mm_Celera | 11:50206639 | CTAGCCTCTACATGC[C/T]GAGGCCTGAGATTAC | 18412 |
rs214361419 | snp | A/C | | | intron-variant | Sqstm1 | Mm_Celera | 11:50203475 | CCCAGCCCTGGTAAC[A/C]CACCCATTACCACAA | 18412 |
rs214406814 | in-del | -/ACAT | | | upstream-variant-2KB | Sqstm1 | Mm_Celera | 11:50211474 | CCCAGACACACACAC[-/ACAT]ACACACACATTCATA | 18412 |
rs215158992 | snp | A/G/T | | | intron-variant | Sqstm1 | Mm_Celera | 11:50206819 | GGCCTGGCAGGGGAC[A/G/T]GTGGGCCATTTAGGG | 18412 |
rs215435519 | in-del | -/TCTCTCTCTCTT | | | upstream-variant-2KB | Sqstm1 | Mm_Celera | 11:50211518 | CTCTCTCTCTCTCTC[-/TCTCTCTCTCTT]TCTCTCTCTCTCTCT | 18412 |
rs215597257 | snp | A/G | | | intron-variant | Sqstm1 | Mm_Celera | 11:50210384 | GCTTTAACTGAACCC[A/G]CCACCGGGCGTTACG | 18412 |
rs215638863 | snp | A/G | | | upstream-variant-2KB | Sqstm1 | GRCm38.p3 | 11:50211985 | AGTAGGGATATACCC[A/G]GGAGATATCATTAAT | 18412 |
rs215786080 | snp | C/T | | | missense | Sqstm1 | Mm_Celera | 11:50202578 | CCTCCTGAGCAGTTT[C/T]CCGACTCCATCTGTT | 18412 |
rs215848540 | snp | A/G | | | upstream-variant-2KB | Sqstm1 | GRCm38.p3 | 11:50211751 | AACTGTTTCAAAATA[A/G]AAAGTGATCCTAGTA | 18412 |
rs216021512 | snp | G/T | | | intron-variant | Sqstm1 | Mm_Celera | 11:50208067 | GCCCAGTGGTAAAGG[G/T]ACATCTACTAAGGCT | 18412 |
rs216095329 | snp | A/G | | | intron-variant | Sqstm1 | Mm_Celera | 11:50205047 | GTACAGGTTCCTGTG[A/G]CCAACTACTAACACT | 18412 |
rs216418902 | snp | A/G | | | intron-variant | Sqstm1 | Mm_Celera | 11:50204127 | ACCACCTTTGGCTGA[A/G]AAAATCCAACCAAGC | 18412 |
rs216478083 | snp | C/T | | | intron-variant | Sqstm1 | Mm_Celera | 11:50205617 | ATATCTGCCCTGGCC[C/T]CTGCACCATGCCAGG | 18412 |
rs216528925 | in-del | -/AAAAA | | | intron-variant | Sqstm1 | Mm_Celera | 11:50207012 | ATTCCCCCAAAAGAC[-/AAAAA]AAAAAAAAAAAGGTA | 18412 |
rs217019745 | snp | A/C | | | intron-variant | Sqstm1 | Mm_Celera | 11:50203507 | GTCCGTCGTCCCCCG[A/C]CCAGGAGAAACCTTG | 18412 |
rs217265572 | snp | C/T | | | intron-variant | Sqstm1 | Mm_Celera | 11:50208246 | CCTGCCACTAACCAC[C/T]GGGCCACCTGTGCCC | 18412 |
rs217442683 | snp | C/T | | | intron-variant | Sqstm1 | Mm_Celera | 11:50205704 | GGTCCCATAGACCCA[C/T]AGGGAGTAGCACTAT | 18412 |
rs217543685 | snp | A/G | | | intron-variant | Sqstm1 | Mm_Celera | 11:50206547 | CTAGAGTGTGGGCCC[A/G]CCCACTTGTGAGTTC | 18412 |
rs217964486 | in-del | -/TT | | | intron-variant | Sqstm1 | Mm_Celera | 11:50208989 | ACCCATCTGGCTTCA[-/TT]TTTTGTTAGCTCACA | 18412 |
rs218436270 | in-del | -/CT | | | intron-variant | Sqstm1 | Mm_Celera | 11:50205242 | TCTAGCACCTTCTCC[-/CT]GTCTCAGAGAGGCTT | 18412 |
rs218652251 | in-del | -/TTTTGTTTTTTG | | | intron-variant | Sqstm1 | Mm_Celera | 11:50201638 | CTTCCATAACCTGCC[-/TTTTGTTTTTTG]TTTTGTTTTGTTTTA | 18412 |
rs218992924 | in-del | -/AC | | | upstream-variant-2KB | Sqstm1 | Mm_Celera | 11:50211464 | CTCACTGCAGCCCAG[-/AC]ACACACACACATACA | 18412 |
rs219017281 | snp | C/T | | | intron-variant | Sqstm1 | Mm_Celera | 11:50203096 | TTCAGACTCAGTTGC[C/T]AACAGAGCATACAGA | 18412 |
rs219135214 | snp | G/T | | | intron-variant | Sqstm1 | Mm_Celera | 11:50203668 | CTCCAAGGTTCAGCT[G/T]AGTGTGTGGCCCTGA | 18412 |
rs220024743 | in-del | -/A | | | intron-variant | Sqstm1 | Mm_Celera | 11:50207013 | ATTCCCCCAAAAGAC[-/A]AAAAAAAAAAGGTAA | 18412 |
rs220365139 | snp | G/T | | | intron-variant | Sqstm1 | Mm_Celera | 11:50210173 | ACAGGGAGGGTCTTG[G/T]CCACTCGTCTCTTGT | 18412 |
rs220379595 | snp | C/T | | | intron-variant | Sqstm1 | Mm_Celera | 11:50208884 | AAGAGGTGTTGGGTC[C/T]CCAGGACCTGCAGCT | 18412 |
rs220875261 | snp | A/G | | | intron-variant | Sqstm1 | Mm_Celera | 11:50205938 | TGCTGAGGTCATGGT[A/G]TCTCTTCACAGCAAT | 18412 |
rs221041579 | snp | C/T | | | intron-variant | Sqstm1 | Mm_Celera | 11:50205193 | CCACTGTCCTTTGCA[C/T]GGAGCCTGGCAGAAC | 18412 |
rs221112983 | in-del | -/CCAT | | | intron-variant | Sqstm1 | Mm_Celera | 11:50205536 | TCAACCTTCAGGCGC[-/CCAT]CCATTCCAGTCCGCA | 18412 |
rs221519741 | in-del | -/GAAAAAA | | | upstream-variant-2KB | Sqstm1 | GRCm38.p3 | 11:50211825 | CATGAGGCTTCTAAG[-/GAAAAAA]AAAGAAAAAAAGTCT | 18412 |
rs221581211 | snp | A/G | | | upstream-variant-2KB | Sqstm1 | GRCm38.p3 | 11:50212175 | CCCAGCCCTTGGGAA[A/G]CTGAGTCAAGAGGAA | 18412 |
rs221645435 | snp | C/T | | | intron-variant | Sqstm1 | Mm_Celera | 11:50206970 | GGAACCCCTATGTGT[C/T]ATGTGTAAGACCCTA | 18412 |
rs221679247 | snp | A/G | | | intron-variant | Sqstm1 | Mm_Celera | 11:50207084 | CTTTAGGCTATGGGG[A/G]TGGCTTGGCCAAGGG | 18412 |
rs222345800 | snp | A/G | | | intron-variant | Sqstm1 | Mm_Celera | 11:50208411 | CAGCTAGAAACCACT[A/G]CATTCAGGCTCCATC | 18412 |
rs222566800 | in-del | -/TTTGG | | | intron-variant | Sqstm1 | Mm_Celera | 11:50208460 | TTGGTGTTTTTTTGT[-/TTTGG]TTTGTTTTTTGAGAC | 18412 |
rs222798737 | snp | C/T | | | intron-variant | Sqstm1 | Mm_Celera | 11:50204766 | TCTAACTGAACTGCC[C/T]TGTCTGTGCTTGGTG | 18412 |
rs222850176 | snp | A/G | | | upstream-variant-2KB | Sqstm1 | Mm_Celera | 11:50211385 | CAAACCCACCCTGTA[A/G]GAGGGGTAGCCAGGG | 18412 |
rs222932441 | snp | C/T | | | synonymous-codon | Sqstm1 | Mm_Celera | 11:50202910 | AGGTTTGCTGACTTC[C/T]GAAGAGCAGCTGCTT | 18412 |
rs223001296 | snp | C/T | | | intron-variant | Sqstm1 | Mm_Celera | 11:50201943 | GGTATACACTTGGGA[C/T]TGCCCATCCCTATCC | 18412 |
rs223001321 | snp | C/G | | | upstream-variant-2KB | Sqstm1 | GRCm38.p3 | 11:50212161 | CACACATCTGTAACC[C/G]CAGCCCTTGGGAAGC | 18412 |
rs223261951 | snp | A/G | | | intron-variant | Sqstm1 | Mm_Celera | 11:50206311 | GGCTCAGTACAGCCC[A/G]TGTATAAATACTGAC | 18412 |
rs223408159 | snp | A/G | | | intron-variant | Sqstm1 | Mm_Celera | 11:50201148 | CAAAACAGCCAGAAG[A/G]TATGTAGACAAATAA | 18412 |
rs223498790 | snp | G/T | | | intron-variant | Sqstm1 | Mm_Celera | 11:50210488 | AGAGGACACGCCGCC[G/T]CGTCCTCGCCCAGAC | 18412 |