Hcls1
DNA & RNA Element - miRTarBase
Target Gene (Entrez ID)miRTarBase IDmiRNASpecies (miRNA)Target GeneSpecies (Target Gene)ExperimentsSupport TypeReferences (PMID)
MIRT603934mmu-miR-5130Mus musculusHcls115163Mus musculusHITS-CLIPFunctional MTI (Weak)21258322
MIRT598696mmu-miR-5133Mus musculusHcls115163Mus musculusHITS-CLIPFunctional MTI (Weak)21258322
DNA & RNA Element - microRNA
Mirbase AccmiRNA NameGene IDGene SymbolmiRNA AlignmentAlignmentGene AlignmentmiRNA StartmiRNA EndGene StartGene EndGenome CoordinatesConservationAlign ScoreSeed CatEnergymirSVR Score
MIMAT0000129mmu-miR-30a*15163Hcls1cgACGUUUGUAGGCUGACUUUc | :|: | | ||||||| ugUUUAGUCCUAAAACUGAAAa221424445[mm9:16:36963259-36963280:+]0.66971447-10.68-1.2862
MIMAT0000143mmu-miR-9*15163Hcls1ugaaagccaauagaUCGAAAUa ||||||| cccgccucuuuaagAGCUUUAg29128149[mm9:16:36962963-36962984:+]0.55371407-7.12-0.2124
MIMAT0000152mmu-miR-140*15163Hcls1ggcaccaagauggGACACCau |||||| aaauaaaaugagaCUGUGGcu39443463[mm9:16:36963278-36963298:+]0.66971200-12.76-0.2255
MIMAT0004535mmu-miR-150*15163Hcls1gaUAGGGGGUCCG---GACA-UGGUc |||||:| | | |||| |||| ggAUCCCUCUGUCCCUCUGUGACCAc221186211[mm9:16:36963021-36963046:+]0.55461270-21.85-0.2270
MIMAT0000249mmu-miR-30e*15163Hcls1cgACAUUUGUAGGCUGACUUUc | ||: | | ||||||| ugUUUAGUCCUAAAACUGAAAa221424445[mm9:16:36963259-36963280:+]0.66971487-11.47-1.2862
MIMAT0004653mmu-miR-342-5p15163Hcls1gaguuagugucuauCGUGGGGa ||||||| ugccuccuucagccGCACCCCa29250271[mm9:16:36963085-36963106:+]0.56321407-19.34-0.2895
MIMAT0004704mmu-miR-335-3p15163Hcls1ccAGUCCUCGUUAUUACUUUUu |:|| :|| | |||||| guUUAGUCCUAAAACUGAAAAu221425446[mm9:16:36963260-36963281:+]0.66971286-4.08-0.1923
MIMAT0001342mmu-miR-425*15163Hcls1ccgccuguGCUGUAAGGGCUa |||| ||||||| uugucuucCGAC-UUCCCGAa2141231[mm9:16:36962847-36962866:+]0.47531517-18.87-1.2332
MIMAT0003725mmu-miR-675-5p15163Hcls1ugacACCCGGGAA--AGGCGUGGu || :|||| ||||||| gaccUGCCUCCUUCAGCCGCACCc219246269[mm9:16:36963081-36963104:+]0.56321497-23.02-0.1957
MIMAT0003892mmu-miR-76215163Hcls1cgagacagggccggGGUCGGGg ||||||| -----------ugaCCAGCCCa29111[mm9:16:36962836-36962846:+]0.41331407-16.37-0.5853
MIMAT0014815mmu-miR-3099*15163Hcls1guucccgaccuucCUUCGACc ||||||| acuucccgaauucGAAGCUGc292242[mm9:16:36962857-36962877:+]0.47531407-9.37-0.1612
MIMAT0003457mmu-miR-68015163Hcls1ggggguacAGUCGUCUACGGg ||| ||||||| gcugaacaUCAUGAGAUGCCu21487107[mm9:16:36962922-36962942:+]0.55271497-16.87-0.2998
MIMAT0003472mmu-miR-693-5p15163Hcls1cuuUUGAAAGCCUACACCGAc || | | ||||||| aauAAAAUGAGACUGUGGCUa219444464[mm9:16:36963279-36963299:+]0.66971427-12.84-1.2971
MIMAT0003491mmu-miR-70115163Hcls1agguagauaaaGUCGCCGAUu | |:||||| auaaaaugagaCUGUGGCUAa211445465[mm9:16:36963280-36963300:+]0.66971260-13.13-0.1341
MIMAT0003499mmu-miR-70915163Hcls1aggagGACGGAGACGGAGg ||| ||||||||| cgaagCUG-CUCUGCCUCc2153451[mm9:16:36962869-36962886:+]0.53731567-26.02-0.3556
MIMAT0003499mmu-miR-70915163Hcls1aggAGGACG--GAGACGGAGg ||:||| ||||||| ucaUCUUGCAGACCUGCCUCc217236256[mm9:16:36963071-36963091:+]0.56321477-25.15-0.2654
MIMAT0004237mmu-miR-74215163Hcls1aaaUGGGUCGUACCAC-CGAAAg |::|: | || || ||||| cugAUUCGCCCUGUUGUGCUUUu220358380[mm9:16:36963193-36963215:+]0.52961230-12.18-0.1988
MIMAT0004238mmu-miR-743a15163Hcls1agaUGAGUCGAACCACA-GAAAg |:||: | || ||| |||| cugAUUCGCCCUGUUGUGCUUUu220358380[mm9:16:36963193-36963215:+]0.52961270-10.83-0.1988
MIMAT0004840mmu-miR-743b-3p15163Hcls1agaUAAGUCGUACUACA-GAAAg ||||: | || ||| |||| cugAUUCGCCCUGUUGUGCUUUu220358380[mm9:16:36963193-36963215:+]0.52961310-10.62-0.1988
MIMAT0004890mmu-miR-509-5p15163Hcls1uaCUAACGG--UGUAAGACC-UCAu || |||| | :|||||| ||| gaGA-UGCCUGAAGUUCUGGCAGUc22199122[mm9:16:36962934-36962957:+]0.55271250-19.27-0.3018
MIMAT0007872mmu-miR-190615163Hcls1ucGGGACGGAGUCCGACGACGu | || | | : ||||||| ccCACUCCAUGGUACUGCUGCa2215778[mm9:16:36962892-36962913:+]0.52221487-22.81-0.8000
MIMAT0007873mmu-miR-189615163Hcls1gaGGAGUGGGUGGUAGU-CUCUc ||| :|: | ||||| |||| gaCCUGGCUGAACAUCAUGAGAu22181103[mm9:16:36962916-36962938:+]0.53001320-19.48-0.1897
MIMAT0007874mmu-miR-190415163Hcls1ggAGGGAGGUCUCCUCGUCUug |:|:||| |||||| uuUUCUUCC--CUUAGCAGAca321387406[mm9:16:36963222-36963241:+]0.62581250-19.93-0.1575
MIMAT0007875mmu-miR-189815163Hcls1cuaGGGGACACUUGGA-ACUGGa ||:|||| :|| ||||| aucCCUCUGUCCCUCUGUGACCa220188210[mm9:16:36963023-36963045:+]0.55461270-21.90-0.3042
MIMAT0007878mmu-miR-1894-3p15163Hcls1gagggaagugggaGAGGGAACg :||||||| uagagugcugggaUUCCCUUGc210290311[mm9:16:36963125-36963146:+]0.56321417-16.78-0.1201
MIMAT0007878mmu-miR-1894-3p15163Hcls1gagggaAGUGGGAGAGGGA-ACg || |:|| ||||| || gugggaUCCCUCUGUCCCUCUGu217183205[mm9:16:36963018-36963040:+]0.55461240-19.26-0.2770
MIMAT0009399mmu-miR-193515163Hcls1ucucuagGCGGUCGGAGACGGa | |||| ||||||| agccgcaCCCCAG-CUCUGCCa216260280[mm9:16:36963095-36963115:+]0.56321537-24.11-0.3858
MIMAT0009399mmu-miR-193515163Hcls1ucucUAGGCGGUCG--GAGACGGa ||:|| ||| ||||||| ccgaAUUCG-AAGCUGCUCUGCCu2192749[mm9:16:36962862-36962884:+]0.53731517-23.33-0.1965
MIMAT0009408mmu-miR-194315163Hcls1aggUCCACGGGUCUAGGAGGGAa || |||:| | ||||||| cgaAGCUGCUCUG--CCUCCCUc2213454[mm9:16:36962869-36962889:+]0.53731577-22.72-0.1957
MIMAT0009444mmu-miR-197015163Hcls1guuucGGAUAGGG-GUCACU-GUGu :||:|||| | |||| ||| aucccUCUGUCCCUCUGUGACCACu219188212[mm9:16:36963023-36963047:+]0.55461290-23.85-0.1201
MIMAT0009445mmu-miR-1274a15163Hcls1accgcgGAC-UUGUCCCUGGACu ||| :|| ||||||| augguaCUGCUGCAAGGACCUGg2176587[mm9:16:36962900-36962922:+]0.53241517-24.99-0.3161
MIMAT0011286mmu-miR-218215163Hcls1gcgccgcaccCUUU-ACACCGca ||:| |||||| aaaauaaaauGAGACUGUGGCua313442464[mm9:16:36963277-36963299:+]0.66971270-10.85-0.4471
MIMAT0000126mmu-miR-27b15163Hcls1cgucUUGAAUCGGUGACACUu || | || ||||||: aauaAAAUGAG--ACUGUGGc218444462[mm9:16:36963279-36963297:+]0.66971300-9.09-0.1154
MIMAT0000140mmu-miR-12815163Hcls1uuucucuggccaagUGACACu |||||| gaaaauaaaaugagACUGUGg28441461[mm9:16:36963276-36963296:+]0.66971206-10.21-0.2350
MIMAT0000144mmu-miR-13215163Hcls1gcugguaccgACAUCUGACAau || ||||||| gaaaauaaaaUG-AGACUGUgg313441461[mm9:16:36963276-36963296:+]0.66971260-10.39-0.1973
MIMAT0000157mmu-miR-14515163Hcls1ucccUAAGGACCCUUUUGACCUg | |||| ||||||| | guuuAGUCCU---AAAACUGAAa220425444[mm9:16:36963260-36963279:+]0.66971230-9.72-0.1148
MIMAT0000537mmu-miR-27a15163Hcls1cgccUUGAAUCGGUGACACUu || | || ||||||: aauaAAAUGAG--ACUGUGGc218444462[mm9:16:36963279-36963297:+]0.66971300-9.57-0.1154
MIMAT0000597mmu-miR-34615163Hcls1ucuccguccgugagccCGUCUGu |||||| cauuuuucuucccuuaGCAGACa28384406[mm9:16:36963219-36963241:+]0.62581206-13.10-0.1854
MIMAT0000659mmu-miR-21215163Hcls1accggcacugacCUCUGACAau |||||||| ugaaaauaaaauGAGACUGUgg311440461[mm9:16:36963275-36963296:+]0.66971300-11.60-0.1955
MIMAT0000665mmu-miR-22315163Hcls1accccAUAAA-CUG---UUUGACUgu |:||| | | ||||||| ccuucUGUUUAGUCCUAAAACUGAaa318419444[mm9:16:36963254-36963279:+]0.64781270-7.73-0.2488
MIMAT0000677mmu-miR-7a15163Hcls1ugUUGUUUUAGUGAUCAGAAGGu :|| |: ||:| ||||||| -uGACCAGCCCAUU-GUCUUCCg222121[mm9:16:36962836-36962856:+]0.41331557-17.90-0.2592
MIMAT0000678mmu-miR-7b15163Hcls1ugUUGUUUUAGUGUUCAGAAGGu :|| |: ||: ||||||| -uGACCAGCCCAU-UGUCUUCCg222121[mm9:16:36962836-36962856:+]0.41331477-15.91-0.2774
MIMAT0001420mmu-miR-43315163Hcls1ugUGGCUCCUCGGGUAGUACUa ||| :| | |||||||| ggACCUGGCUGAACAUCAUGAg22180101[mm9:16:36962915-36962936:+]0.53001567-17.80-0.1774
DNA & RNA Element - TRANSFAC
AccessionASDescriptionSpeciesEntrezPubmedBinding Info
G006192Hcls1Mus musculus15163
DNA & RNA Element - RepTar
Gene NamemiRNABeginEndProfile
Hcls1mmu-miR-30astarbeg:427end:445pic:3' CGACGTTTGTAGGC---TGACTTTC 5'& .||| ||||||| &5' ---------GTCCTAAAACTGAAA- 3'
Hcls1mmu-miR-30estarbeg:427end:445pic:3' CGACATTTGTAGGC---TGACTTTC 5'& .||| ||||||| &5' ---------GTCCTAAAACTGAAA- 3'
Hcls1mmu-miR-1943beg:37end:54pic:3' AGGTCCACGGGTCTAGGAGGGAA 5'& |||.| ||||||| &5' ------TGCTCTG--CCTCCCT- 3'
Hcls1mmu-miR-1935beg:264end:280pic:3' TCTCTAGGCGGTCGGAGACGGA 5'& || |||| ||||||| &5' ------CC-CCAG-CTCTGCC- 3'
Hcls1mmu-miR-709beg:36end:52pic:3' AGGAGGACGGAGACGGAGG 5'& ||| |||||||||| &5' -----CTG-CTCTGCCTCC 3'
Hcls1mmu-miR-3099starbeg:32end:42pic:3' GTTCCCGACCTTCCTTCGACC 5'& ||||||| &5' -------------GAAGCTG- 3'
Hcls1mmu-miR-7abeg:2end:21pic:3' TGTTGTTTTAGTGATCAGAAGGT 5'& ||.| ||.| ||||||| &5' -CAGCC----CATT-GTCTTCC- 3'
Hcls1mmu-miR-7bbeg:2end:21pic:3' TGTTGTTTTAGTGTTCAGAAGGT 5'& ||.| ||. ||||||| &5' -CAGCC----CATT-GTCTTCC- 3'
Hcls1mcmv-miR-m59-1beg:64end:77pic:3' GACTGCCAGCTCCGTGACGATT 5'& ||.||||||. &5' -----------GGTACTGCTG- 3'
Hcls1mcmv-miR-M87-1beg:35end:59pic:3' CGACGGCGACGGCTGCCGACGGA 5'& |||||. ||||| | || || &5' GCTGCT-CTGCCTCCCTCTTCC- 3'
Hcls1mmu-let-7cbeg:235end:259pic:3' TTGGTATGT-TGGATGATGGAGT 5'& |.| |.|| ||||.| |||. &5' -ATCTTGCAGACCTGCCTCCTT- 3'
Hcls1mmu-let-7dbeg:35end:51pic:3' TTGATACGTTGGATGATGGAGA 5'& || .|. ||.|||| &5' ------GCTGCT--CTGCCTC- 3'
Hcls1mmu-let-7ebeg:239end:256pic:3' TTGATATGTTGGAGGATGGAGT 5'& |.||. |||.|||| &5' -----TGCAGA--CCTGCCTC- 3'
Hcls1mmu-let-7fbeg:239end:256pic:3' TTGATATGTTAGATGATGGAGT 5'& |.||. ||.|||| &5' -----TGCAGAC--CTGCCTC- 3'
Hcls1mmu-let-7fbeg:35end:51pic:3' TTGATATGTTAGATGATGGAGT 5'& .| || ||.|||| &5' ------GCTG-CT-CTGCCTC- 3'
Hcls1mmu-let-7gbeg:239end:256pic:3' TTGACATGTTTGATGATGGAGT 5'& |.||.|| ||.|||| &5' -----TGCAGAC--CTGCCTC- 3'
Hcls1mmu-let-7ibeg:240end:256pic:3' TTGTCGTGTTTGATGATGGAGT 5'& .||.|| ||.|||| &5' ------GCAGAC--CTGCCTC- 3'
Hcls1mmu-let-7ibeg:34end:51pic:3' TTGTCGTGTTTGATGATGGAGT 5'& ||| .|| ||.|||| &5' ---AGCT---GCT-CTGCCTC- 3'
Hcls1mmu-miR-1191beg:448end:459pic:3' ATCCCGATGTATCATTCTGAC 5'& |.|||||| &5' -------------TGAGACTG 3'
Hcls1mmu-miR-1194beg:372end:389pic:3' TCCTAGATCGTCAATGAGTAAG 5'& || ||.||||||. &5' --------GCTTTTGCTCATTT 3'
Hcls1mmu-miR-122beg:48end:66pic:3' GTTTGTGGTAACAGTGTGAGGT 5'& || || ||||||| &5' ------CCTCT-TCCCACTCCA 3'
Hcls1mmu-miR-122beg:147end:164pic:3' GTTTGTGGTAACAGT---GTGAGGT 5'& || |.||||| &5' -----------GTAGAATCGCTCCA 3'
Hcls1mmu-miR-1274abeg:64end:88pic:3' ACCGCGGACT-TGTCCCTGGACT 5'& |||. ||| .|| |||||||. &5' TGGTA-CTGCTGCAAGGACCTGG 3'
Hcls1mmu-miR-143beg:222end:243pic:3' CTCGATGTCACGA-AGTAGAGT 5'& |||| || || ||||||. &5' -AGCT-CA-TGAAATCATCTT- 3'
Hcls1mmu-miR-146bstarbeg:286end:312pic:3' TGGTCT--TGACTC--AGGGATCCCG 5'& |.||| .|||.| ||||| || &5' -CTAGAGTGCTGGGATTCCCTT--GC 3'
Hcls1mmu-miR-1897-5pbeg:45end:69pic:3' GGGGGAGAAAGAGGT-AGGTTTC 5'& |.||||| ||| ||| |||| .| &5' CTCCCTC-TTC-CCACTCCATGG 3'
Hcls1mmu-miR-1897-5pbeg:379end:401pic:3' GGGGGAGAAAGAGGTAGGTTTC 5'& |.| |.|||||.| || || &5' -CTCATTTTTCTTC--CCTTAG 3'
Hcls1mmu-miR-1937abeg:283end:305pic:3' ACCCCCGAG----CA-GGCCCTAA 5'& |||| || |.|||||| &5' -----GCTCTAGAGTGCTGGGATT 3'
Hcls1mmu-miR-193starbeg:69end:86pic:3' AGTAGAACGGGCGTTTCTGGGT 5'& || |.||||.||||. &5' ------TG-CTGCAAGGACCT- 3'
Hcls1mmu-miR-1941-3pbeg:289end:304pic:3' TACCCTCTATGACGATTCTAC 5'& ||| ||||..||| &5' ----GAG----TGCTGGGAT- 3'
Hcls1mmu-miR-1941-5pbeg:109end:131pic:3' TTCGGAGACATGGTCG--TAGAGGGA 5'& .|||| |||. .|||||| &5' ----TTCTGG--CAGTCTGTCTCCC- 3'
Hcls1mmu-miR-1948beg:318end:336pic:3' GACATGCTCACGAGACGGATTT 5'& |.|||| | |||||.| &5' ------GGGTGC-CAGCCTAGA 3'
Hcls1mmu-miR-1952beg:159end:178pic:3' GTCTTCCTCCCACCTCT 5'& |||. || ||||||.|. &5' CAGGTGG-GGGTGGGGG 3'
Hcls1mmu-miR-1958beg:376end:393pic:3' TGAATGACGAAGGTGAAAGGAT 5'& .|||| ||.|||.|| &5' -----TTGCT--CATTTTTCT- 3'
Hcls1mmu-miR-1961beg:236end:256pic:3' AAGATTGAT--GATGGAGT 5'& ||| .| ||.|||| &5' -TCTTGCAGACCTGCCTC- 3'
Hcls1mmu-miR-1971beg:316end:333pic:3' AGAGTCG-GGTCGGAAATG 5'& || .|. ||||||| &5' -CTGGGTGCCAGCCT---- 3'
Hcls1mmu-miR-1982.1beg:162end:182pic:3' GACACCCTCTTGTATCCCACTCT 5'& |||||.| .|||||.|. &5' --GTGGGGGTG---GGGGTGGGG 3'
Hcls1mmu-miR-1982.1beg:168end:189pic:3' GACACCCTCTTGTATCCCACTCT 5'& |||||.| .|||||.|| &5' --GTGGGGGTG---GGGGTGGGA 3'
Hcls1mmu-miR-1983beg:155end:170pic:3' TCTTTTGTACGAGGTCCACTC 5'& ||||||||||.| &5' ---------GCTCCAGGTGGG 3'
Hcls1mmu-miR-207beg:325end:344pic:3' CTCCCTCCTCTCGG---TCCTCTTCG 5'& |||| |||.||.|| &5' ----------AGCCTAGAGGGGAGGC 3'
Hcls1mmu-miR-2183beg:170end:185pic:3' TCCTCCAGTCCCCAAGTT 5'& ||.||| .||||| &5' -GGGGGT-GGGGGT---- 3'
Hcls1mmu-miR-219beg:108end:123pic:3' TCTTAACGCAAACCTGTTAGT 5'& ||| |.||.|| &5' --------GTTCTGGCAGTC- 3'
Hcls1mmu-miR-291b-3pbeg:397end:423pic:3' TGTTTGTTTTACCT--ACGTGAAA 5'& .||.||||| |||| ||| ||| &5' GCAGACAAATTGGAACTGCCCTT- 3'
Hcls1mmu-miR-296-3pbeg:257end:277pic:3' CCTCTCGGAGGTGGGTTGGGAG 5'& |||| | ||||.|.|| &5' ----AGCCGCACCCCAGCTCT- 3'
Hcls1mmu-miR-296-3pbeg:297end:321pic:3' CCTCTC--GGAGGTGGGTTGGGAG 5'& |.|| |||. |||.||||| &5' -GGGATTCCCTTGCCCCGACCCT- 3'
Hcls1mmu-miR-3099beg:122end:147pic:3' AGGGGTTGGAGAGAGA-TCGGAT 5'& ||.|| .|||||.| |||.| &5' TCTCCCGCCTCTTTAAGAGCTT- 3'
Hcls1mmu-miR-30astarbeg:70end:93pic:3' CGACGTTTGTAGGCTGACTTTC 5'& |||||||. | |.|.||||| &5' GCTGCAAGGACCTGGCTGAA-- 3'
Hcls1mmu-miR-331-5pbeg:312end:335pic:3' CCTAGGGACCC-TGGTATGGATC 5'& || ||||||| .||| .||||| &5' -GA-CCCTGGGTGCCA-GCCTAG 3'
Hcls1mmu-miR-338-3pbeg:281end:302pic:3' GTTGTTTTAGTGAC----TACGACCT 5'& | || .||||||. &5' --------TTGCTCTAGAGTGCTGGG 3'
Hcls1mmu-miR-342-5pbeg:250end:271pic:3' GAGTTAGTGTCTATCGTGGGGA 5'& ||| ||| ||||||| &5' CTCCTT--CAGCC-GCACCCC- 3'
Hcls1mmu-miR-343beg:326end:343pic:3' AGACCCGTGTACTTCCCTCT 5'& || .| ||.|||||. &5' -----GCCTA-GAGGGGAGG 3'
Hcls1mmu-miR-3475beg:275end:294pic:3' AAGTTTGGTACACGGAGGTCT 5'& | |||| || |||.||| &5' --CCAACCT--TG-CTCTAGA 3'
Hcls1mmu-miR-423-5pbeg:182end:203pic:3' TTTCAGAGCGAGAGACGGGGAGT 5'& .| || | |||||.||||| &5' --GGGATC-C-CTCTGTCCCTC- 3'
Hcls1mmu-miR-423-5pbeg:412end:424pic:3' TTTCAGAGCGAGAGACGGGGAGT 5'& ||||||.|| &5' -------------CTGCCCTTC- 3'
Hcls1mmu-miR-432beg:150end:166pic:3' GACGGGTGAC-TAGATGAGGTTCT 5'& | ||| .|||||.| &5' ---------GAATC-GCTCCAGG- 3'
Hcls1mmu-miR-433beg:79end:101pic:3' TGTGGCTCCTCGGGTAGTACTA 5'& ||| .| | |||||||| &5' --ACCTGGCTGAACATCATGA- 3'
Hcls1mmu-miR-450b-5pbeg:61end:82pic:3' ATAAGT-CCTTGTATGACGTTTT 5'& || || || |.||||||.. &5' ----CATGGTAC-TGCTGCAAGG 3'
Hcls1mmu-miR-452beg:385end:407pic:3' CAGAGTCAAAGGAGACGTTTGT 5'& |.|| |||. |||.||| &5' -TTTCTTC--CCTTAGCAGACA 3'
Hcls1mmu-miR-483beg:379end:402pic:3' GAGGGAAGAGAAGAGGGCA-GAA 5'& ||| .||.||||| ||. | &5' CTCATTTTTCTTC-CCTTAGC-- 3'
Hcls1mmu-miR-483starbeg:166end:185pic:3' TTCTGCCCTCCCC-TCCTCACT 5'& |. || |||| .||.||| &5' --GGGGGTGGGGGTGGGGGTG- 3'
Hcls1mmu-miR-532-3pbeg:155end:178pic:3' ACGTTCGGA--ACCCACACCCTCC 5'& || || |||| |||||.| &5' -GCT--CCAGGTGGGGGTGGGGG- 3'
Hcls1mmu-miR-666-5pbeg:108end:133pic:3' CCGAGAGTGTC-GACAC-GGGCGA 5'& |.||| .||| |||| ||||| &5' -GTTCTGGCAGTCTGTCTCCCGC- 3'
Hcls1mmu-miR-675-5pbeg:246end:269pic:3' TGACACCCGGGAAA--GGCGTGGT 5'& ||| .|||| ||||||| &5' -CTGCC--TCCTTCAGCCGCACC- 3'
Hcls1mmu-miR-693-3pbeg:24end:43pic:3' AATGTCGGTGT-AGACTTTCGACG 5'& ||. || .||||||| &5' ------CCGAATTC--GAAGCTGC 3'
Hcls1mmu-miR-693-5pbeg:448end:464pic:3' CTTTTGAAAGC-CT-ACACCGAC 5'& .| || ||||||| &5' ---------TGAGACTGTGGCT- 3'
Hcls1mmu-miR-696beg:54end:75pic:3' GGGTGTCGT-TCGTGTGCG 5'& ||||| || .|.|| .|| &5' CCCACTCCATGGTAC-TGC 3'
Hcls1mmu-miR-702beg:167end:188pic:3' CTCGCCCCATTTCCCACCCGT 5'& |.|.|||| ..||||||| &5' GGGTGGGGGTGGGGGTGGG-- 3'
Hcls1mmu-miR-705beg:43end:63pic:3' ACGGGTGGGGTGGAGGGTGG 5'& |||. |||. |.||||||. &5' -GCCT-CCCT-CTTCCCACT 3'
Hcls1mmu-miR-705beg:115end:134pic:3' ACGGGTGGGGTGGAGGGTGG 5'& || .| .|||||.|| &5' ----CAGTCTGTCTCCCGCC 3'
Hcls1mmu-miR-709beg:236end:257pic:3' AGGAGGACGGA--GACGGAGG 5'& ||.||| |||||||| &5' ---TCTTGCAGACCTGCCTCC 3'
Hcls1mmu-miR-715beg:159end:183pic:3' GTGCGCCCCCACACGTGCCTC 5'& || |.||||||| | ..||.| &5' CAGGTGGGGGTGGGGGTGGGG 3'
Hcls1mmu-miR-743b-5pbeg:77end:95pic:3' ACTACCTGTGGTCAGACTTGT 5'& |||| | | ||||||| &5' ----GGAC-CTGG-CTGAACA 3'
Hcls1mmu-miR-744beg:258end:279pic:3' ACGACAATCGGGATCGGGGCGT 5'& || | ||| |||.|.|| &5' -GCCGCA--CCCCAGCTCTGC- 3'
Hcls1mmu-miR-762beg:314end:333pic:3' CGAGACAGGG--CCGGGGTCGGGG 5'& ||| ||. ||||||. &5' -------CCCTGGGTGCCAGCCT- 3'
Hcls1mmu-miR-762beg:259end:277pic:3' CGAGACAGGGCC-GGGGTCGGGG 5'& ||| |||||||.|. &5' --------CCGCACCCCAGCTCT 3'
Hcls1mmu-miR-876-3pbeg:197end:213pic:3' ACTTAATGAAACATTTGGTGAT 5'& || ||| .|||||| &5' -------CTCTGT-GACCACT- 3'
Hcls1mmu-miR-877beg:198end:217pic:3' GGGACGC-GGTAGAGGAGATG 5'& |.|||.| ||| |||.|| &5' CTCTGTGACCA-CTCTTC--- 3'
Hcls1mmu-miR-96beg:261end:282pic:3' TCGTTTTTACACGATCACGGTTT 5'& ||| ||| |||||| &5' -GCACCCCA--GCTC-TGCCAA- 3'
Hcls1mmu-miR-98beg:239end:256pic:3' TTGTTATGTTGAATGATGGAGT 5'& |.||. ||.|||| &5' -----TGCAGAC--CTGCCTC- 3'
Hcls1mmu-miR-98beg:34end:51pic:3' TTGTTATGTTGAAT-GATGGAGT 5'& |.|| ||.|||| &5' --------AGCTGCTCTGCCTC- 3'
Hcls1mmu-miR-425starbeg:17end:31pic:3' CCGCCTGTGCTGTAAGGGCTA 5'& |||| ||||||| &5' --------CGAC-TTCCCGA- 3'
DNA & RNA Element - RAID2
Gene NameRAID IDInteractor 1Category 1ID 1Interactor 2Category 2ID 2MethodsScore
Hcls1RAID00061098mmu-miR-128-3pmiRNAMIMAT0000140Hcls1mRNA15163Prediction0.1828
Hcls1RAID00463442mmu-miR-1943-5pmiRNAMIMAT0009408Hcls1mRNA15163Prediction0.1828
Hcls1RAID00623910mmu-miR-27a-3pmiRNAMIMAT0000537Hcls1mRNA15163Prediction0.1828
Hcls1RAID00727984mmu-miR-27b-3pmiRNAMIMAT0000126Hcls1mRNA15163Prediction0.1828
Hcls1RAID00932407mmu-miR-7052-5pmiRNAMIMAT0028008Hcls1mRNA15163Prediction0.1828
Hcls1RAID01259216mmu-miR-3073b-5pmiRNAMIMAT0022375Hcls1mRNA15163Prediction0.1828
Hcls1RAID01445005mmu-miR-5133miRNAMIMAT0020644Hcls1mRNA15163CLIP-seq0.5483
Hcls1RAID01651653mmu-miR-7b-5pmiRNAMIMAT0000678Hcls1mRNA15163Prediction0.1828
Hcls1RAID01706466mmu-miR-145a-5pmiRNAMIMAT0000157Hcls1mRNA15163Prediction0.1828
Hcls1RAID01871534mmu-miR-6368miRNAMIMAT0025112Hcls1mRNA15163Prediction0.1828
Hcls1RAID02269763mmu-miR-223-3pmiRNAMIMAT0000665Hcls1mRNA15163Prediction0.1828
Hcls1RAID02277963mmu-miR-6976-5pmiRNAMIMAT0027854Hcls1mRNA15163Prediction0.1828
Hcls1RAID02607375mmu-miR-433-3pmiRNAMIMAT0001420Hcls1mRNA15163Prediction0.1828
Hcls1RAID02640083mmu-miR-6405miRNAMIMAT0025157Hcls1mRNA15163Prediction0.1828
Hcls1RAID03120573mmu-miR-212-3pmiRNAMIMAT0000659Hcls1mRNA15163Prediction0.1828
Hcls1RAID03208124mmu-miR-6967-5pmiRNAMIMAT0027836Hcls1mRNA15163Prediction0.1828
Hcls1RAID03272618mmu-miR-149-3pmiRNAMIMAT0016990Hcls1mRNA15163Prediction0.1828
Hcls1RAID03448223mmu-miR-7665-5pmiRNAMIMAT0029836Hcls1mRNA15163Prediction0.1828
Hcls1RAID03508135mmu-miR-7016-5pmiRNAMIMAT0027936Hcls1mRNA15163Prediction0.1828
Hcls1RAID03535294mmu-miR-6404miRNAMIMAT0025156Hcls1mRNA15163Prediction0.1828
Hcls1RAID03879572mmu-miR-346-5pmiRNAMIMAT0000597Hcls1mRNA15163Prediction0.1828
Hcls1RAID03913617mmu-miR-132-3pmiRNAMIMAT0000144Hcls1mRNA15163Prediction0.1828
Hcls1RAID03926586mmu-miR-7a-5pmiRNAMIMAT0000677Hcls1mRNA15163Prediction0.1828
Hcls1RAID03929222mmu-miR-1906miRNAMIMAT0007872Hcls1mRNA15163Prediction0.1828
Hcls1RAID03940189mmu-miR-7074-5pmiRNAMIMAT0028054Hcls1mRNA15163Prediction0.1828
Hcls1RAID04038974mmu-miR-3547-5pmiRNAMIMAT0027832Hcls1mRNA15163Prediction0.1828
Hcls1RAID04052813mmu-miR-5130miRNAMIMAT0020641Hcls1mRNA15163CLIP-seq0.5483
Hcls1RAID04059906mmu-miR-709miRNAMIMAT0003499Hcls1mRNA15163Prediction0.1828