SNP - dbSNP |
dbSNP | Type | Alleles | Het | Se(het) | Fxn-class | Gene Name | Assembly | Chr-pos | Sequence | Entrez Gene |
rs4173870 | snp | A/G | 0.497654 | 0.0341661 | missense | Hcls1 | GRCm38.p3 | 16:36946692 | ATGGCTATGGCGGTC[A/G]GTTTGGAGTGGAGAG | 15163 |
rs4173871 | snp | A/G | 0.375 | 0.216506 | intron-variant | Hcls1 | Mm_Celera | 16:36948149 | ACATTGGAAAGTTCA[A/G]AATTCACTTCTACAC | 15163 |
rs4173872 | snp | C/T | 0.444444 | 0.157135 | intron-variant | Hcls1 | GRCm38.p3 | 16:36953744 | GTGTGTGTGTGTGTG[C/T]GCGCATGCGCATGCG | 15163 |
rs4173873 | snp | A/G | 0.5 | 0 | intron-variant | Hcls1 | GRCm38.p3 | 16:36954329 | GCGCTAGAATCCCAG[A/G]CACACACTAGCACAC | 15163 |
rs6153976 | snp | A/G | 0.5 | 0 | intron-variant | Hcls1 | Mm_Celera | 16:36956071 | TACGGTAAAGTGGGT[A/G]CAAGGGAAGAGAGAA | 15163 |
rs6154576 | snp | G/T | 0.5 | 0 | intron-variant | Hcls1 | Mm_Celera | 16:36956185 | CTCTGAGGTTTAAGT[G/T]AGAANAGTGTAGGGT | 15163 |
rs6154578 | snp | C/G | 0.5 | 0 | intron-variant | Hcls1 | Mm_Celera | 16:36956190 | AGGTTTAAGTNAGAA[C/G]AGTGTAGGGTGGCTG | 15163 |
rs6155101 | snp | A/G | 0.5 | 0 | intron-variant | Hcls1 | Mm_Celera | 16:36956264 | GCTTTTCTTAATCCT[A/G]TCTTGAGTCTCTCCT | 15163 |
rs6156304 | snp | A/G | 0.5 | 0 | intron-variant | Hcls1 | Mm_Celera | 16:36956520 | CAGGTACTGTCTTAT[A/G]GATCACTACTCCCTT | 15163 |
rs6312645 | snp | C/T | 0.290657 | 0.246672 | intron-variant | Hcls1 | Mm_Celera | 16:36944440 | GAATTTTGCTAGATT[C/T]GCTTGCTCCNTCAAT | 15163 |
rs6312667 | snp | A/G | 0.5 | 0 | intron-variant | Hcls1 | Mm_Celera | 16:36944450 | AGATTNGCTTGCTCC[A/G]TCAATACAAGCCATG | 15163 |
rs6312772 | snp | C/T | 0.5 | 0 | intron-variant | Hcls1 | Mm_Celera | 16:36944504 | TGTGTCAAAAGTCTC[C/T]TAGGTATGACACTTG | 15163 |
rs6327324 | snp | C/T | 0.5 | 0 | intron-variant | Hcls1 | Mm_Celera | 16:36951465 | AGTTTAAATTTAAAG[C/T]TAATCATGTCTTTGT | 15163 |
rs6328352 | snp | A/G | 0.5 | 0 | intron-variant | Hcls1 | Mm_Celera | 16:36951643 | gagggagaggcaggt[A/G]aatcaaggccagcct | 15163 |
rs6328959 | snp | C/T | 0.5 | 0 | intron-variant | Hcls1 | GRCm38.p3 | 16:36951747 | GCAAAGCcatacaca[C/T]acacacacacacaca | 15163 |
rs6329055 | snp | C/T | 0.5 | 0 | intron-variant | Hcls1 | Mm_Celera | 16:36951795 | acacacacacacaca[C/T]anacatatatatata | 15163 |
rs6329058 | snp | C/T | 0.5 | 0 | intron-variant | Hcls1 | Mm_Celera | 16:36951797 | acacacacacacana[C/T]acatatatatataga | 15163 |
rs31747075 | snp | C/G | 0.32 | 0.24 | intron-variant | Hcls1 | Mm_Celera | 16:36959669 | AGATCCTGGGTAGAT[C/G]TCATACAGACCTTAA | 15163 |
rs32286714 | snp | A/G | 0.32 | 0.24 | intron-variant | Hcls1 | GRCm38.p3 | 16:36959569 | AGATATTCCATGACA[A/G]AAACCAAATTTACAC | 15163 |
rs32420463 | snp | A/T | 0.32 | 0.24 | intron-variant | Hcls1 | Mm_Celera | 16:36959674 | CTAGAAGATCCTGGG[A/T]AGATCTCATACAGAC | 15163 |
rs45641614 | snp | A/G | 0.231111 | 0.249285 | intron-variant | Hcls1 | Mm_Celera | 16:36941119 | GCTGGGAATGGGCTA[A/G]GTGACCTTGGACAAA | 15163 |
rs45749448 | snp | A/G | 0.231111 | 0.249285 | utr-variant-3-prime, downstream-variant-500B | Hcls1, Fbxo40 | Mm_Celera | 16:36963199 | AAAACTGAAAATAAA[A/G]TGAGACTGTGGCTAA | 15163 |
rs45895858 | snp | A/C | | | intron-variant | Hcls1 | Mm_Celera | 16:36954150 | CTTTCTCTGTGTATG[A/C]ATGCACAAGCATGTA | 15163 |
rs45897242 | snp | A/G | 0.336735 | 0.234472 | intron-variant | Hcls1 | Mm_Celera | 16:36949160 | AAAGGAAAAGACAGT[A/G]CTAAGCAAGTACAGG | 15163 |
rs45959380 | snp | A/C | 0.231111 | 0.249285 | intron-variant | Hcls1 | Mm_Celera | 16:36957017 | TTCGTCACATGGAAT[A/C]TGGGCTTCAGTGCCC | 15163 |
rs46116852 | snp | A/T | 0.244898 | 0.249948 | intron-variant | Hcls1 | Mm_Celera | 16:36949126 | CTAGAGGCTCCTGCA[A/T]ACACAAGGGTAGTTT | 15163 |
rs46153936 | snp | G/T | 0.231111 | 0.249285 | intron-variant | Hcls1 | Mm_Celera | 16:36936322 | AGGCTTCCAGATGGG[G/T]ATAGAAAGTGGAGAC | 15163 |
rs46273220 | snp | C/T | 0.244898 | 0.249948 | intron-variant | Hcls1 | Mm_Celera | 16:36945479 | ATAACGCTATGCGGT[C/T]CCAGGAGTCCTTGCA | 15163 |
rs46287129 | snp | A/G | | | intron-variant | Hcls1 | Mm_Celera | 16:36958969 | TTACTAAAGCTTAAA[A/G]CACACATTGTAACCC | 15163 |
rs46320560 | snp | G/T | 0.231111 | 0.249285 | intron-variant | Hcls1 | Mm_Celera | 16:36942128 | TCGCCGTGAAGAGCC[G/T]CGGCTATGCCATGAG | 15163 |
rs46401267 | snp | G/T | 0.231111 | 0.249285 | intron-variant | Hcls1 | Mm_Celera | 16:36948812 | GTCAGGTCTCATGAC[G/T]TCTCTTGCTGGTGCT | 15163 |
rs46435835 | snp | C/G/T | 0.231111 | 0.249285 | intron-variant | Hcls1 | GRCm38.p3 | 16:36939868 | TCAAGGCAAATACAG[C/G/T]GAATGACATAATATG | 15163 |
rs46436940 | snp | G/T | | | intron-variant | Hcls1 | Mm_Celera | 16:36958923 | TCCATTGCTGAGAGT[G/T]GGGTGTTGAAGTCTC | 15163 |
rs46548770 | snp | G/T | | | intron-variant | Hcls1 | Mm_Celera | 16:36948033 | TTTTTTTTTTGTGGG[G/T]GCTAAAGATTTGATC | 15163 |
rs46564134 | snp | A/T | 0.231111 | 0.249285 | intron-variant | Hcls1 | Mm_Celera | 16:36941840 | AGCAGGTCAGCTCCC[A/T]GACTGTGCTGTGAGC | 15163 |
rs46743666 | snp | C/T | 0.231111 | 0.249285 | utr-variant-5-prime | Hcls1 | Mm_Celera | 16:36935054 | GTAGATGTGAAAAGC[C/T]GTAACCAGGAACCAG | 15163 |
rs46751725 | snp | A/G | | | intron-variant | Hcls1 | Mm_Celera | 16:36958925 | CATTGCTGAGAGTGG[A/G]GTGTTGAAGTCTCCC | 15163 |
rs46762034 | snp | C/T | | | intron-variant | Hcls1 | Mm_Celera | 16:36948108 | CCCTCTTCAGCCCCT[C/T]GGCCATTTAGTGATC | 15163 |
rs46955880 | snp | A/G | 0.132653 | 0.220748 | intron-variant | Hcls1 | Mm_Celera | 16:36948758 | CCATGCTTCTCAGGT[A/G]ACAGACAGGACAGCA | 15163 |
rs47034707 | snp | A/C/G | | | intron-variant | Hcls1 | Mm_Celera | 16:36958879 | TGCAAACTAAACAGA[A/C/G]ACAAATTGAAATTAA | 15163 |
rs47082306 | snp | A/G | | | utr-variant-3-prime, downstream-variant-500B | Hcls1, Fbxo40 | Mm_Celera | 16:36963152 | TTTCTTCCCTTAGCA[A/G]ACAAATTGGAACTGC | 15163 |
rs47140827 | snp | A/C | 0.231111 | 0.249285 | intron-variant | Hcls1 | Mm_Celera | 16:36935289 | AGCATGATTGAGCAC[A/C]TATCTAGGACCCTGG | 15163 |
rs47161735 | snp | G/T | | | intron-variant | Hcls1 | Mm_Celera | 16:36954396 | TGGGACCCAAACCCA[G/T]GTCCTCATAGTTGCA | 15163 |
rs47195130 | snp | A/T | 0.231111 | 0.249285 | upstream-variant-2KB | Hcls1 | Mm_Celera | 16:36934389 | AGGCCAGTAGTCAGA[A/T]CTCTGTAAGTGAGCT | 15163 |
rs47365200 | snp | A/C | 0.124444 | 0.216185 | intron-variant | Hcls1 | Mm_Celera | 16:36961425 | GTGTAGCAATGTCTC[A/C]TTCTTCAGGTCTGGC | 15163 |
rs47376730 | snp | A/G | | | intron-variant | Hcls1 | Mm_Celera | 16:36954239 | AACTTAACTCTTGAG[A/G]CTGGGTCTCTCTTAA | 15163 |
rs47393143 | snp | C/T | | | intron-variant | Hcls1 | Mm_Celera | 16:36958874 | TTCTATTAGTTTCAA[C/T]GTGTCTCTGTTCAGT | 15163 |
rs47419669 | snp | A/T | 0.260355 | 0.249785 | intron-variant | Hcls1 | Mm_Celera | 16:36946820 | TATCCTAAATATGGT[A/T]TGCATGGTGTCCATT | 15163 |
rs47551854 | snp | A/G | 0.231111 | 0.249285 | intron-variant | Hcls1 | Mm_Celera | 16:36938285 | ATCTAAACTTTTACA[A/G]AAGTGTAGAACATGT | 15163 |
rs47585421 | snp | A/G | | | intron-variant | Hcls1 | Mm_Celera | 16:36953990 | ACTAGATTTGATGCC[A/G]GTGTATTTATTCCTG | 15163 |
rs47653640 | snp | C/T | | | intron-variant | Hcls1 | Mm_Celera | 16:36958931 | AATAGTGGGAGACTT[C/T]AACACCCCACTCTCA | 15163 |
rs47997944 | snp | C/G | | | missense | Hcls1 | Mm_Celera | 16:36962174 | CAGGATGAGGATGCA[C/G]AGGGAGACTATGAGG | 15163 |
rs48035154 | snp | A/G | 0.231111 | 0.249285 | utr-variant-5-prime | Hcls1 | Mm_Celera | 16:36935068 | CCGTAACCAGGAACC[A/G]GTAAAGGTGGGTGCT | 15163 |
rs48059108 | snp | A/G | 0.231111 | 0.249285 | intron-variant | Hcls1 | Mm_Celera | 16:36937415 | GTGAAGTGGTCAGGA[A/G]CACCTCAGCCACTCT | 15163 |
rs48143901 | snp | C/T | | | intron-variant | Hcls1 | Mm_Celera | 16:36953893 | ATTCTTTTTGTTCCA[C/T]GGGTTTAATTTTCCA | 15163 |
rs48203082 | snp | A/T | | | intron-variant | Hcls1 | Mm_Celera | 16:36958933 | GTAATAGTGGGAAAC[A/T]TCAATACCCCACTCT | 15163 |
rs48231875 | snp | A/G | 0.231111 | 0.249285 | intron-variant | Hcls1 | Mm_Celera | 16:36937062 | CAAGCTGTGGACATA[A/G]TGAACAATCCCAACA | 15163 |
rs48358405 | snp | A/T | | | intron-variant | Hcls1 | Mm_Celera | 16:36948190 | CAGGAAAGATCCAGC[A/T]CAAAGATACCTGGTT | 15163 |
rs48398361 | snp | G/T | 0.231111 | 0.249285 | upstream-variant-2KB | Hcls1 | Mm_Celera | 16:36934682 | GTACCCCTAAGTGCT[G/T]GGATCACAGAAGTTC | 15163 |
rs48516663 | snp | G/T | 0.124444 | 0.216185 | synonymous-codon | Hcls1 | Mm_Celera | 16:36962197 | CTATGAGGATGTGCT[G/T]GAGCCCGAGGACACC | 15163 |
rs48528022 | snp | C/T | 0.231111 | 0.249285 | intron-variant | Hcls1 | Mm_Celera | 16:36940518 | GTGTTCTGGGAAGTG[C/T]TGACCTGAGAGAGCA | 15163 |
rs48585804 | snp | A/C | 0.231111 | 0.249285 | intron-variant | Hcls1 | Mm_Celera | 16:36935218 | CTAAGGACTGTGTGC[A/C]GTGGTTGACAATGAA | 15163 |
rs49071180 | snp | C/T | 0.231111 | 0.249285 | intron-variant | Hcls1 | Mm_Celera | 16:36948868 | CAAATCATCAATTTA[C/T]GTTCAGCAGGGCTCA | 15163 |
rs49285393 | snp | A/T | | | intron-variant | Hcls1 | Mm_Celera | 16:36954099 | TTCATGTTGTATTCA[A/T]GTTACCTTTCATAGG | 15163 |
rs49286794 | snp | A/G | 0.231111 | 0.249285 | intron-variant | Hcls1 | Mm_Celera | 16:36941107 | AGCTGGGACCCTGCT[A/G]GGAATGGGCTAAGTG | 15163 |
rs49368355 | snp | C/T | 0.231111 | 0.249285 | intron-variant | Hcls1 | Mm_Celera | 16:36957039 | TCAGTGCCCTAGGAT[C/T]CCCAGGCCTTATGGC | 15163 |
rs49390375 | snp | A/C | | | intron-variant | Hcls1 | Mm_Celera | 16:36953919 | TTCCAACACTGGCTG[A/C]ATCTATTTGTCTTAC | 15163 |
rs49419264 | snp | A/T | 0.231111 | 0.249285 | intron-variant | Hcls1 | Mm_Celera | 16:36942284 | AGGCTATAGACATAA[A/T]ATAGACAGATAATAA | 15163 |
rs49436459 | snp | A/G | 0.231111 | 0.249285 | intron-variant | Hcls1 | Mm_Celera | 16:36935272 | ATGGCCTGCACTCGG[A/G]GAGCATGATTGAGCA | 15163 |
rs49456279 | snp | A/G | 0.231111 | 0.249285 | upstream-variant-2KB, downstream-variant-500B | Hcls1, Golgb1 | Mm_Celera | 16:36933556 | TTTCATAGCTCATGC[A/G]GGTTGGGTAGACATC | 15163 |
rs49468677 | snp | C/T | 0.231111 | 0.249285 | intron-variant | Hcls1 | Mm_Celera | 16:36937802 | ACAGAGCACATTTCT[C/T]GCTGACACTGTTGCC | 15163 |
rs49502208 | snp | C/T | 0.231111 | 0.249285 | upstream-variant-2KB | Hcls1 | Mm_Celera | 16:36934566 | CATACAGATCATTTT[C/T]CCACTAAGCCTTTTT | 15163 |
rs49529878 | snp | C/T | | | intron-variant | Hcls1 | Mm_Celera | 16:36958924 | GGAAACTTCAATACC[C/T]CACTCTCATCAATGG | 15163 |
rs49598531 | snp | G/T | | | intron-variant | Hcls1 | Mm_Celera | 16:36954100 | TCATGTTGTATTCAT[G/T]TTACCTTTCATAGGC | 15163 |
rs49648682 | snp | A/G | 0.231111 | 0.249285 | upstream-variant-2KB | Hcls1 | Mm_Celera | 16:36933729 | TGTGAGGGGGAAGTG[A/G]GTTTCCTTGGTGTCA | 15163 |
rs49969807 | snp | A/G | 0.231111 | 0.249285 | intron-variant | Hcls1 | Mm_Celera | 16:36940776 | TGGATTGAATAGTAT[A/G]TGTGACTGACTGTCT | 15163 |
rs49996560 | snp | C/T | 0.132653 | 0.220748 | intron-variant | Hcls1 | Mm_Celera | 16:36949062 | TGATTAGGGCTGCAA[C/T]ACTTCGAGAAGGTGA | 15163 |
rs49998521 | snp | A/G | 0.231111 | 0.249285 | intron-variant | Hcls1 | Mm_Celera | 16:36935183 | GGTCTTTACTAATAG[A/G]TGCTGAACTCTTGAT | 15163 |
rs50020455 | snp | C/T | 0.231111 | 0.249285 | intron-variant | Hcls1 | Mm_Celera | 16:36940087 | TGGAATGTCTCTGAA[C/T]ACGGTAGAGACCTAA | 15163 |
rs50046007 | snp | A/G | | | intron-variant | Hcls1 | Mm_Celera | 16:36954316 | CTCTGCCTCTCCAGC[A/G]CTAGAATCCCAGGCA | 15163 |
rs50055454 | snp | C/T | 0.231111 | 0.249285 | intron-variant | Hcls1 | Mm_Celera | 16:36940365 | AGTGTTACTCTTAAA[C/T]GAATCAAGCAATACT | 15163 |
rs50096076 | snp | C/T | 0.124444 | 0.216185 | synonymous-codon | Hcls1 | Mm_Celera | 16:36962062 | GGAAGAGCCAGTGTA[C/T]GAAGCAGCACCCGAG | 15163 |
rs50115119 | snp | C/T | 0.231111 | 0.249285 | upstream-variant-2KB, downstream-variant-500B | Hcls1, Golgb1 | Mm_Celera | 16:36933191 | TCTGAGACTCCTTCA[C/T]CTCACTGGCCAGCAC | 15163 |
rs50158024 | snp | A/C/G | 0.231111 | 0.249285 | intron-variant | Hcls1 | GRCm38.p3 | 16:36937035 | GTGTTGTATGACCAC[A/C/G]GGTCACCCCTACAAG | 15163 |
rs50241626 | snp | C/T | 0.336735 | 0.234472 | intron-variant | Hcls1 | Mm_Celera | 16:36946466 | TGCTTATACCAACCT[C/T]TTACTCTAAGCCTGT | 15163 |
rs50255460 | snp | C/T | 0.231111 | 0.249285 | intron-variant | Hcls1 | Mm_Celera | 16:36948169 | CACTTCTACACTTAT[C/T]CAGGCCAGGAAAGAT | 15163 |
rs50601691 | snp | C/T | 0.231111 | 0.249285 | intron-variant | Hcls1 | Mm_Celera | 16:36935384 | CCTGAAGGCGACCCA[C/T]GGAAGATGAGGACAA | 15163 |
rs50603736 | snp | A/G | 0.124444 | 0.216185 | intron-variant | Hcls1 | Mm_Celera | 16:36939795 | CCATAGGCTAGTCAG[A/G]ATCATCTAACCAGGA | 15163 |
rs50606442 | snp | G/T | 0.231111 | 0.249285 | intron-variant | Hcls1 | Mm_Celera | 16:36948221 | GATGGAGGAAAAACA[G/T]CAGTTGCTTGCGGTA | 15163 |
rs50642300 | snp | A/G | | | intron-variant | Hcls1 | Mm_Celera | 16:36954196 | AGGAGCCAAAGGTCA[A/G]TGTTGGGTGTATTCT | 15163 |
rs50786053 | snp | C/T | 0.231111 | 0.249285 | intron-variant | Hcls1 | Mm_Celera | 16:36936809 | TGTGAGTAGTTCAAC[C/T]AGTCTGTCCCACTGG | 15163 |
rs50814034 | snp | A/G | 0.391111 | 0.206368 | utr-variant-3-prime | Hcls1 | Mm_Celera | 16:36962901 | TTAAGAGCTTTAGGT[A/G]GAATCGCTCCAGGTG | 15163 |
rs50815245 | snp | A/C | 0.231111 | 0.249285 | upstream-variant-2KB | Hcls1 | Mm_Celera | 16:36934357 | GTATGTCAGAGTTCA[A/C]TTCACCAGCTTAGAG | 15163 |
rs50883497 | snp | C/T | 0.231111 | 0.249285 | upstream-variant-2KB | Hcls1 | Mm_Celera | 16:36933852 | CTATAAATAGCCTTA[C/T]TAGAACAAATAAAGT | 15163 |
rs50949782 | snp | C/T | | | intron-variant | Hcls1 | Mm_Celera | 16:36953906 | CACGGGTTTAATTTT[C/T]CAACACTGGCTGCAT | 15163 |
rs51089765 | snp | A/C | 0.231111 | 0.249285 | missense | Hcls1 | Mm_Celera | 16:36957253 | GCAAAATTTGAGTCC[A/C]TGGCTGAGGAGAAGA | 15163 |
rs51119517 | snp | A/G | 0.231111 | 0.249285 | intron-variant | Hcls1 | Mm_Celera | 16:36941039 | GTAAATGTTGGAGAT[A/G]GTTTCACAAAAGCTT | 15163 |
rs51131993 | snp | A/G | 0.231111 | 0.249285 | intron-variant | Hcls1 | Mm_Celera | 16:36936753 | TAGTTGAACATTTAC[A/G]TAATAAAAATAAAGC | 15163 |
rs51321604 | snp | A/G | 0.260355 | 0.249785 | intron-variant | Hcls1 | Mm_Celera | 16:36949113 | AGCTGGAGTGTTGCT[A/G]GAGGCTCCTGCAAAC | 15163 |
rs51359997 | snp | A/C | 0.124444 | 0.216185 | intron-variant | Hcls1 | Mm_Celera | 16:36941978 | TTTACACAAAGTGCA[A/C]ATAAAGAACTGCAGA | 15163 |