DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0004522 mmu-miR-27b* 12229 Btk caagugguuaGUCGAUUCGAGa | ||||||||| -----gcuggCUGCUAAGCUCc 2 13 1 17 [mm9:X:131077258-131077274:-] 0.6147 152 7 -15.79 -0.5991 MIMAT0000217 mmu-miR-188-5p 12229 Btk ggGAGGU--GGUAC--GUUCCCUAc |||:| | | | |||||||| ugCUCUAAGCAAAGGUCAAGGGAUu 2 20 168 192 [mm9:X:131077083-131077107:-] 0.5831 149 7 -20.44 -0.4215 MIMAT0004665 mmu-miR-218-1* 12229 Btk ccacgaacUGCCUU--GGUACAAa || || ||||||| ccuacaaaACCUAAUUCCAUGUUu 2 15 36 59 [mm9:X:131077216-131077239:-] 0.6035 141 7 -10.03 -0.9107 MIMAT0014816 mmu-miR-3099 12229 Btk agGGGUUGGAG---AGAGAUCGGAu ||:::|: | ||||||||| ucCCUGGCUGCAGGGCUCUAGCCUu 2 21 70 94 [mm9:X:131077181-131077205:-] 0.5933 151 7 -27.55 -0.1780 MIMAT0003462 mmu-miR-684 12229 Btk aacugaaCUUCCCUUUUGa |:||||||||| cuuugggGGAGGGAAAACu 2 13 255 273 [mm9:X:131077002-131077020:-] 0.5831 156 7 -21.02 -0.3715 MIMAT0003476 mmu-miR-669b 12229 Btk uguacguguacGUGUGUUUUGa | :||||||| uccuccucucuCCUACAAAACc 2 12 25 46 [mm9:X:131077229-131077250:-] 0.6091 143 7 -8.53 -0.7861 MIMAT0004236 mmu-miR-741 12229 Btk agauguaucuuaccguAGAGAGu |||||| uccguggaucuccuccUCUCUCc 2 8 15 37 [mm9:X:131077238-131077260:-] 0.6091 120 6 -13.48 -0.2096 MIMAT0009422 mmu-miR-1951 12229 Btk aucggugUGGUCAGAGGUGAUg | :|| |||||||| aacuguaAAUAG-CUCCACUAg 2 16 270 290 [mm9:X:131076985-131077005:-] 0.5831 149 7 -18.04 -0.4167 MIMAT0009428 mmu-miR-1956 12229 Btk agGCG-ACUGAGUCGGGACCUGa :|| ||| |||||||||| aaUGCAUGA-AGAGCCCUGGACa 2 21 109 130 [mm9:X:131077145-131077166:-] 0.5831 157 7 -27.61 -0.4570 MIMAT0011214 mmu-miR-2138 12229 Btk uaaggcgguucGGGCAAGGGAa |:|||||||| gccuuucuucuCUCGUUCCCUg 2 12 140 161 [mm9:X:131077114-131077135:-] 0.5831 151 7 -20.56 -0.3969 MIMAT0011214 mmu-miR-2138 12229 Btk uaAGGCGGUUCGGGCAAGGGAa |:: |::|| ||||||| ugUUUCCUGAG-GAGUUCCCUg 2 21 55 75 [mm9:X:131077200-131077220:-] 0.6035 146 7 -18.66 -0.2290 MIMAT0015642 mmu-miR-3471 12229 Btk uuacggaaugucaACCUAGAGu |||||||| cugcuaagcuccgUGGAUCUCc 2 10 6 27 [mm9:X:131077248-131077269:-] 0.6147 145 7 -15.62 -0.3849 MIMAT0015645 mmu-miR-3473 12229 Btk ccgacucGGUAGAGAGGu :| ||||||| gaucuccUCCUCUCUCCu 2 12 21 38 [mm9:X:131077237-131077254:-] 0.6091 143 7 -15.18 -0.7636 MIMAT0000211 mmu-miR-182 12229 Btk gccacacUCAAGAUGGU-AAC-GGUUu || || ||:| ||| |||| uguaaauAGCUCCACUAGUUGUCCAAc 2 19 273 299 [mm9:X:131076976-131077002:-] 0.5831 125 0 -9.23 -0.4328 MIMAT0000214 mmu-miR-185 12229 Btk aguCCUUGACGGAAAGAGAGGu ||| || |: ||||||| cguGGAUCUCCUCCUCUCUCCu 2 20 17 38 [mm9:X:131077237-131077258:-] 0.6091 159 7 -21.00 -0.7563 MIMAT0001076 mmu-miR-384-3p 12229 Btk uaacACUUGUUAAAGAUCCUUa ||:||| |||||||| gcccUGGACA---UCUAGGAAu 2 19 121 139 [mm9:X:131077136-131077154:-] 0.5831 154 7 -17.44 -0.2840 MIMAT0003182 mmu-miR-494 12229 Btk cuccaaagggcacaUACAAAGu ||||||| caaaaccuaauuccAUGUUUCc 2 9 40 61 [mm9:X:131077214-131077235:-] 0.6035 140 7 -8.34 -0.4346 MIMAT0004847 mmu-miR-882 12229 Btk ugaUUACGCGAUUGAGAGAGGa :|| : || |||||||| gugGAUCUCCU-CCUCUCUCCu 2 20 18 38 [mm9:X:131077237-131077257:-] 0.6091 149 7 -16.97 -0.7599 MIMAT0004941 mmu-miR-544 12229 Btk cuCGAACGAUUUUUACGU-CUUa || | || :|||||| ||| gcGCCUACU--GAAUGCAUGAAg 2 21 99 119 [mm9:X:131077156-131077176:-] 0.5831 121 0 -9.90 -0.4319

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G005302 Btk Mus musculus 12229

DNA & RNA Element - RepTar Gene Name miRNA Begin End Profile Btk mmu-miR-384-3p beg:122 end:140 pic:3' TAACACTTGTTAAAGATCCTTA 5'& ||.||| ||||||||| &5' ----TGGACA---TCTAGGAAT 3' Btk mmu-miR-3471 beg:10 end:27 pic:3' TTACGGAATGTCAACCTAGAGT 5'& ||. |||||||| &5' ---GCTCCG----TGGATCTC- 3' Btk mmu-miR-141 beg:300 end:320 pic:3' GGTAGAAATGGTCTG-TCACAAT 5'& ||. .| ||||||| &5' ------TTGTTGGTTAAGTGTTA 3' Btk mmu-miR-17star beg:63 end:83 pic:3' GATGTTCACGGGAGTGACGTCA 5'& .||| |||| .|||||| &5' ----GAGTTCCCTGGCTGCAG- 3' Btk mmu-miR-185 beg:17 end:38 pic:3' AGTCCTTGACGGAA-AGAGAGGT 5'& ||| || ||| ||||||| &5' ---GGATCT-CCTCCTCTCTCC- 3' Btk mmu-miR-185 beg:130 end:153 pic:3' AGTCCTTGACGGAAAG-AGAGGT 5'& .||||| |||||||| ||||. &5' -TAGGAA-TGCCTTTCTTCTCT- 3' Btk mmu-miR-188-5p beg:173 end:192 pic:3' GGGAGGTGGTA-C-GTTCCCTAC 5'& .| | |||||||| &5' ------GCAAAGGTCAAGGGAT- 3' Btk mmu-miR-1892 beg:138 end:160 pic:3' TAGGAG---GGAGGGCAGGGGTTTA 5'& |||. .|||.|||.||| &5' --CCTTTCTTCTCTCGTTCCC---- 3' Btk mmu-miR-1894-5p beg:246 end:268 pic:3' TCTCCGTCCACCATCCCCTCTC 5'& .|| |.||||||.| &5' --GGGAACACTTTGGGGGAGGG 3' Btk mmu-miR-1894-5p beg:322 end:347 pic:3' TCTCCGTCCACCATCCCCTC-TC 5'& .| ||. ||||||.||||.| || &5' GGTGGT-GGTGGTGGGGGGGTAG 3' Btk mmu-miR-1897-5p beg:23 end:44 pic:3' GGGGGAGAAAGAGGTAGGTTTC 5'& ||.|||| ||||| |||| &5' CCTCCTC--TCTCCTA-CAAA- 3' Btk mmu-miR-1897-5p beg:138 end:158 pic:3' GGGGGAGAAAGAG-GTAGGTTTC 5'& ||..|| ||||| |.|.| &5' -CCTTTC-TTCTCTCGTTC---- 3' Btk mmu-miR-1929 beg:108 end:129 pic:3' GAGACGAGATATTTCAGGATCTT 5'& ||| |. |.|| |||.|| &5' ---TGCA-TGAAGAGCCCTGGA- 3' Btk mmu-miR-194 beg:360 end:381 pic:3' AGGTGTACCTCAACG--ACAATGT 5'& |||| ||||. ||||||| &5' -----ATGG-GTTGTTTTGTTACA 3' Btk mmu-miR-195 beg:0 end:12 pic:3' CGGTTATAAAGACACGACGAT 5'& ||| ||||||| &5' ----------CTG-GCTGCTA 3' Btk mmu-miR-1956 beg:108 end:130 pic:3' AGGCG-ACTGAGTCGGGACCTGA 5'& .|| ||| |||||||||| &5' --TGCATGAAG-AGCCCTGGAC- 3' Btk mmu-miR-1966 beg:139 end:161 pic:3' CTGAGAGAGGACTCGGTCGAGGGAA 5'& ||.|||.|| |. |.||||| &5' --CTTTCTTCT---CTCGTTCCCT- 3' Btk mmu-miR-1970 beg:137 end:167 pic:3' GTTTCGGA----------TAGGGGTCACTGTGT 5'& |||| .|.||| ||.||.| &5' ----GCCTTTCTTCTCTCGTTCCC--TGGCATA 3' Btk mmu-miR-200a beg:300 end:320 pic:3' TGTAGCAATGGTCTGTCACAAT 5'& .| |.|||. . ||||||| &5' GC-TTGTTGGTTA--AGTGTTA 3' Btk mmu-miR-202-5p beg:331 end:350 pic:3' TTTCTTCATATACGTATCCTT 5'& | .||. | .|||||| &5' ---GTGGTGGGGGGGTAGGAA 3' Btk mmu-miR-20bstar beg:61 end:83 pic:3' GATCTTCACGAGTG--TGACGTCA 5'& ||.| |.|| .|||||| &5' ---GAGGAGTTCCCTGGCTGCAG- 3' Btk mmu-miR-2138 beg:141 end:161 pic:3' TAAGGCGGTTCGGGCAAGGGAA 5'& |||. |. |.|||||||| &5' -TTCTTCT---CTCGTTCCCT- 3' Btk mmu-miR-215 beg:165 end:186 pic:3' CAGAC-AGTTTAGTATCCAGTA 5'& ||| || || |||||| &5' --CTGCTCTAAGCAAAGGTCA- 3' Btk mmu-miR-27bstar beg:0 end:17 pic:3' CAAGTGGTTAGTCGATTCGAGA 5'& .| . | ||||||||| &5' ----GCTGG-CTGCTAAGCTC- 3' Btk mmu-miR-30c-1star beg:15 end:40 pic:3' CCTCATTTGTT---GG-GAGAGGGTC 5'& ||..|. || ||||||.| &5' ---GTGGATCTCCTCCTCTCTCCTA- 3' Btk mmu-miR-30c-2star beg:15 end:40 pic:3' TCTCATTTGTCGGA----AGAGGGTC 5'& ||..|. ||| |||||.| &5' ---GTGGATCTCCTCCTCTCTCCTA- 3' Btk mmu-miR-327 beg:206 end:223 pic:3' TAGGAGTACGGGGAGTTCA 5'& || ||| |.||||| &5' --CC-CATAA-CTTCAAG- 3' Btk mmu-miR-331-5p beg:184 end:204 pic:3' CCTAGGGACCCT---GGTATGGATC 5'& |||| |..|.||||| &5' --------GGGATTTCTGTGCCTAG 3' Btk mmu-miR-343 beg:246 end:266 pic:3' AGACCC--GTGTACTTCCCTCT 5'& |||| ||| ..|||||. &5' --TGGGAACACTTTGGGGGAGG 3' Btk mmu-miR-3473 beg:26 end:38 pic:3' CCGACTCGGTAGAGAGGT 5'& || ||||||| &5' -------CC-TCTCTCC- 3' Btk mmu-miR-382 beg:280 end:305 pic:3' GCTTAGGTGGT-----GCTTGTTGAAG 5'& |||||.| | ||||.||| &5' ----TCCACTAGTTGTCCAACAGCTT- 3' Btk mmu-miR-432 beg:206 end:224 pic:3' GACGGGTGACTAGATGAGGTTCT 5'& ||||. |||.||||| &5' ---CCCATA-----ACTTCAAGA 3' Btk mmu-miR-450b-5p beg:262 end:278 pic:3' ATAAGTCCTTGTATGACGTTTT 5'& .|||| ||||.||| &5' -----GGGAAA--ACTGTAAA- 3' Btk mmu-miR-532-3p beg:320 end:342 pic:3' ACGTTCGGAACC-CA--CACCCTCC 5'& .||. ||| | |||||.|| &5' ---GAGTGGTGGTGGTGGTGGGGGG 3' Btk mmu-miR-582-5p beg:259 end:277 pic:3' TCATTGACCAACTTGTTGACAT 5'& || |.| ||||||| &5' -------GGAGGGAAAACTGTA 3' Btk mmu-miR-671-5p beg:82 end:105 pic:3' GAGGTCGGGGAGGTCCCGAAGGA 5'& |||.|| ||.|||| || ||| &5' CTCTAG-CCTTCCAT-GCG-CCT 3' Btk mmu-miR-673-3p beg:108 end:129 pic:3' CCACGTGTCTTGAGTCGGGGCCT 5'& ||||. ||| |||||.||| &5' --TGCAT-GAAG--AGCCCTGGA 3' Btk mmu-miR-684 beg:254 end:274 pic:3' AACTGAACTTCCCTTTTGA 5'& |||. |.|||||||||| &5' TTGGG--GGAGGGAAAACT 3' Btk mmu-miR-690 beg:72 end:95 pic:3' AAACCAACA-CTCG-GATCGGAAA 5'& ||| || |.|| |||||||| &5' --TGGCTGCAGGGCTCTAGCCTT- 3' Btk mmu-miR-702 beg:319 end:340 pic:3' CTCGCC-CCATTTCCCACCCGT 5'& |||.|| |||.. |||||| &5' GAGTGGTGGTGGT-GGTGGG-- 3' Btk mmu-miR-709 beg:20 end:38 pic:3' AGGAGGACGGAGACGGAGG 5'& .||||| ||||| |||| &5' -TCTCCT-CCTCT--CTCC 3' Btk mmu-miR-758 beg:361 end:382 pic:3' ATCACCTGGTC---CAGTGTTT 5'& |||. . ||.|||| &5' ---TGGGTTGTTTTGTTACAA- 3' Btk mmu-miR-882 beg:27 end:39 pic:3' TGATTACGCGATTGAGAGAGGA 5'& ||||||||| &5' -------------CTCTCTCCT 3' Btk mmu-miR-1951 beg:276 end:298 pic:3' ATCGGTGTGGTCAG-AGGTGATG 5'& |||| |||.|||. |||| &5' TAGCTCCACTAGTTGTCCA---- 3'

DNA & RNA Element - miRNAMap Gene Name Mature miRNA Target Start Target End miRNA 3-5 Alignment Target 5-3 Btk; Bpk mmu-miR-10a 63 86 GUGUUUAAGCCUA-GAUGUCCCAU | :|:||| ||:||||| GAGGAGUUCCCUGGCUGCAGGGC- Btk; Bpk mmu-miR-10b 63 86 UGUGUUUAAGCCAA-GAUGUCCC- | :|:||| ||:||||| -GAGGAGUUCCCUGGCUGCAGGGC Btk; Bpk mmu-miR-127 7 27 -CGGUUCGAGUCUGCCUAGGCU ||:|||||| | :|||||: UGCUAAGCUCCG-UGGAUCUC- Btk; Bpk mmu-miR-128a 241 262 UUUUCUCUGGCCAAGUGACACU- :|:||: || |||| ||: --UGGGGAUGGGAACACUUUGGG Btk; Bpk mmu-miR-128b 236 262 -CUU--UCUCUGGCCAAGUGACACU- ||| :|:||: || |||| ||: UGAAUUGGGGAUGGGAACACUUUGGG Btk; Bpk mmu-miR-145 258 276 -UUCCCUAAGGACCCUUUUGACCUG ::|||| |||||||||| UGGGGGA-----GGGAAAACUGU-- Btk; Bpk mmu-miR-150 321 345 GUGACCAUGUUC-CCAACCCUCU- | ||||: :| ||| |||:|: GAGUGGUGGUGGUGGUGGGGGGGU Btk; Bpk mmu-miR-17-3p 63 84 AUGUUCACGGGAGUGACGUCA | :||| |||| :|||||| GAGGAGUUCCCUGGCUGCAGG Btk; Bpk mmu-miR-18 76 106 AUAGACGU-----GAUC------UACGUGGAAU ||||| |||| ||||:||| --GCUGCAGGGCUCUAGCCUUCCAUGCGCCUA- Btk; Bpk mmu-miR-181b 101 120 -GGGUGGCUGUCGUUACUUACAA ||:||:|| ||| |||| GCCUACUGAAUGCA-UGAAG--- Btk; Bpk mmu-miR-185 134 154 -CUUGACGGAAAGA-GAGGU |:| ||||||||| |||: AGGAAUGCCUUUCUUCUCUC Btk; Bpk mmu-miR-188 168 193 -UGGGAGGUGGUA-C-GUUCCCUAC :|:|| :| | |||||||| UGCUCUAAGCAAAGGUCAAGGGAUU Btk; Bpk mmu-miR-194 354 382 AGGUG----UACCUCAACG--ACAAUGU- |||: |||| ||||: ||||||| GCCAUUAAAAUGG-GUUGUUUUGUUACAA Btk; Bpk mmu-miR-199a 236 263 -CUUGUCCAUCAGACUUGUG--ACCC- |||: || |||||| |||| UGAAUUGGGGAUGGGAACACUUUGGGG Btk; Bpk mmu-miR-204 241 271 GUCCGUAUCCU------ACUGUUUCCCUU- :|| ||:||| ||: ::|||||| UGGGGAUGGGAACACUUUGGGGGAGGGAAA Btk; Bpk mmu-miR-207 241 268 CUCCCUCCUCUC--GG--UCCUCUUCG :|||| |:|| |: :||:||:| UGGGGAUGGGAACACUUUGGGGGAGGG Btk; Bpk mmu-miR-211 241 271 -UCCGUUUCCU------ACUGUUUCCCUU- :|| | :||| ||: ::|||||| UGGGGAUGGGAACACUUUGGGGGAGGGAAA Btk; Bpk mmu-miR-214 89 110 GACGGACAG-ACACGGACGACA |||| || |||| ||| -AGCCUUCCAUGCGCCUACUGA Btk; Bpk mmu-miR-215 166 187 CAGAC-AGUUUAGUAUCCAGUA ||| || || |||||| -ACUGCUCUAAGCAAAGGUCAA Btk; Bpk mmu-miR-216b 52 75 AGUGUAAACGGACGUCUCUAAAGGG- ||::||| |||| :||| ||||| CCAUGUUU-CCUGAGGAG--UUCCCU Btk; Bpk mmu-miR-217 50 84 UAGGU-CAG--------UCAA-GGACU-ACGUCAU |||| ||: |||| ||||: ||||| UUCCAUGUUUCCUGAGGAGUUCCCUGGCUGCAGG- Btk; Bpk mmu-miR-291b-3p 229 260 CUGUUUGUUUUA---CCUAC----GUGAAA- |||:|| :||| ||||| |||||| AACAGACUGAAUUGGGGAUGGGAACACUUUG Btk; Bpk mmu-miR-294 251 275 UGUGUGUU-UUCCCUUCG---UGAAA |||| ::||||:| ||| -AACACUUUGGGGGAGGGAAAACUG- Btk; Bpk mmu-miR-296 324 346 -UGUCCUA-ACU-CCCCCCCGGGA : || ||: |||||||: UGGUGGUGGUGGUGGGGGGGUA-- Btk; Bpk mmu-miR-298 64 105 -CCU-------------UCUUG---UCGGGAGGAGA-CGG ||| ||::| ||||:||| ||| AGGAGUUCCCUGGCUGCAGGGCUCUAGCCUUCCAUGCGCCU Btk; Bpk mmu-miR-300 62 118 -CUUCUC--------------UCGA-----------ACG-GGA ACGUAU ||:||| :||| ||| ||| |||||: UGAGGAGUUCCCUGGCUGCAGGGCUCUAGCCUUCCAUGCGCCUACUGAAUGCAUGA Btk; Bpk mmu-miR-302 233 259 AGUGGUUU----UGUACCUUCGUGAAU ||::|| : ||||:| ||||| -GACUGAAUUGGGGAUGGGAACACUUU Btk; Bpk mmu-miR-302b 102 127 -GAUGAUUU-UGUACC-UUCGUGAA |||||:|| :|||| :||| || CCUACUGAAUGCAUGAAGAGCCCUG Btk; Bpk mmu-miR-302c 102 127 -GGUGACUU-UGUACC-UUCGUGAAC |:|||||| :|||| :||| || CCUACUGAAUGCAUGAAGAGCCCUG- Btk; Bpk mmu-miR-31 74 95 GUCGAUACGG-UCGUAGAACGGA- :|| ||| :|| ||| |||| UGGC--UGCAGGGC-UCUAGCCUU Btk; Bpk mmu-miR-324-3p 324 349 GGUCGUCGUGG--ACCCCGUCA-CC- :|::|:: : ||||| :|| || -UGGUGGUGGUGGUGGGGGGGUAGGA Btk; Bpk mmu-miR-33 96 117 GUUACGUUGAUG--UUACGUG- ||||: |||| ||||||: -CAUGCGCCUACUGAAUGCAUG Btk; Bpk mmu-miR-339 65 86 ACUCGA-GGACCUCCUGUCCCU |||:| ||||| :||||| GGAGUUCCCUGGCU-GCAGGGC Btk; Bpk mmu-miR-351 74 90 GUCCGAGUUUCCCGAGGAGUCCCU |||| |||||||: -UGGCUGC-AGGGCUCUA------ Btk; Bpk mmu-miR-370 51 87 UUGGUCC-AAGGU--------GGGGUCG----UCCG- ||| | |||| |||::|| :||| -UCCAUGUUUCCUGAGGAGUUCCCUGGCUGCAGGGCU Btk; Bpk mmu-miR-382 282 306 GCUUAGGUGGU--GC---UUGUUGAAG |||||:| :| ||||:||| ---CUCCACUAGUUGUCCAACAGCUUG Btk; Bpk mmu-miR-384 124 141 ACACUUGUUAAAGAUCCUUA- ||:||| ||||||||| -CUGGACA---UCUAGGAAUG Btk; Bpk mmu-miR-412 323 342 UGCCGAUCACCUGGUCCACUUCA :|| |:|||| |||| | GUGG-UGGUGGU---GGUGGGGG Btk; Bpk mmu-miR-431 59 87 -GGACGUACU------GCCGGACGUUCUGU |||| || :|| |||||:|:| UCCUGAG-GAGUUCCCUGG-CUGCAGGGCU Btk; Bpk mmu-miR-449b 72 95 -GGUCGAUCGUUACGUGA-CGGA- |::||| ||| || || |||| CCUGGCU-GCAGGGCUCUAGCCUU Btk; Bpk mmu-miR-465-3p 102 129 AGAUGAAU------CUUUCCGGGACUAG ||||| |||: ||||||: CCUACUGAAUGCAUGAAGAGCCCUGGA- Btk; Bpk mmu-miR-483 242 269 UGUUCUGCCCU--------CCCCUCCUCACU ::||:|||| |||||||: -GGGGAUGGGAACACUUUGGGGGAGGGA--- Btk; Bpk mmu-miR-488* 131 148 CUGGUUCUUUGUCGGAAAGUU |:|:||| ||||||| -UCUAGGAAU--GCCUUUCU- Btk; Bpk mmu-miR-503 64 82 CGUCAUGACAAGGG--CGACGAU : |||||| ||||| ----AGGAGUUCCCUGGCUGCA- Btk; Bpk mmu-miR-541 120 146 ACACUGG---UUGUAG--UCUUAGGGAA- :|| :||||| :|||| |||| ---AGCCCUGGACAUCUAGGAAUGCCUUU Btk; Bpk mmu-miR-551b 349 372 GUGACUUUGGUUCA--UACCCAGC- || :||| ||||||:| --AUGUUGCCAUUAAAAUGGGUUGU Btk; Bpk mmu-miR-615 62 86 UUCUCCCUCU-GGGUCCGAG--CCU- || |||| ||| |||| ||: -UGA-GGAGUUCCCUGGCUGCAGGGC Btk; Bpk mmu-miR-652 77 105 -ACGUGUUGGGAUCAC------CGCGGUAA |||| ::|:|||| ||||| CUGCAGGGCUCUAGCCUUCCAUGCGCCU-- Btk; Bpk mmu-miR-671 57 95 GGAGG-----UC-GGGGAG----GUCCCGAA---GGA- :||| || :|||| ||||||| ||| UUUCCUGAGGAGUUCCCUGGCUGCAGGGCUCUAGCCUU Btk; Bpk mmu-miR-675-5p 75 105 -UGACA-CCCGGGA----AAGG--CGUGGU :||| ||||:|| |||| ||:|| GGCUGCAGGGCUCUAGCCUUCCAUGCGCCU Btk; Bpk mmu-miR-681 66 88 -UCGACGGACGGUCGCUCCGAC ||:| |||| | || :|||| GAGUUCCCUGGCUGCAGGGCUC Btk; Bpk mmu-miR-682 64 84 GUCUGAAGUGACACUGACGUC- :|| ||| ||| :|||||| AGGAGUUCCCUG--GCUGCAGG Btk; Bpk mmu-miR-683 62 85 -CUCCUGUGUCGAAUGUCGUCC- ||||| : || :| ||||| UGAGGAGUUCCCUGGCUGCAGGG Btk; Bpk mmu-miR-684 256 275 -AACUGAACUUCCCUUUUGA- |||: |:|||||||||| UUUGGG--GGAGGGAAAACUG Btk; Bpk mmu-miR-689 221 250 CCUGGGGC------GGCUC-GCCCCUGC- |||:|| |:|| :|||||:| AGACUCCUAACAGACUGAAUUGGGGAUGG Btk; Bpk mmu-miR-690 73 96 AAACCAACA-CUCG-GAUCGGAAA ||| || |:|| |||||||| -CUGGCUGCAGGGCUCUAGCCUUC Btk; Bpk mmu-miR-697 223 250 AGAGG--UGUCCUGG------UCCUACAA |||| |||| ||: :||||| ACUCCUAACAG-ACUGAAUUGGGGAUGG- Btk; Bpk mmu-miR-7 276 299 GUUGUUUUAGUGAUCAGAAGGU- ||:|: |||||||: |||| AAAUAGCUCCACUAGUUGUCCAA Btk; Bpk mmu-miR-702 320 347 -CUCGCC-CCAUU----UCCCACCCGU- |||:|| |||:: :||| |||:| AGAGUGGUGGUGGUGGUGGGG-GGGUAG Btk; Bpk mmu-miR-709 22 39 AGGAGGACGGAGACGGAGG- :||||| ||||| |||| AUCUCCU-CCUCU--CUCCU Btk; Bpk mmu-miR-710 217 245 GAGUUGAGAGGGGU-UCUGA----ACC- |||| ||||: ||||| ||| UUCAAGACUCCUAACAGACUGAAUUGGG Btk; Bpk mmu-miR-741 127 156 GAUGUA---UCUUACCGU----AGAGAGU- |||| :||||| | ||||||: -GACAUCUAGGAAUGCCUUUCUUCUCUCGU Btk; Bpk mmu-miR-744 75 103 -CGACAA-UCGGGAUCGGG----GCGU- |||| :||:||||||: :||: GGCUGCAGGGCUCUAGCCUUCCAUGCGC Btk; Bpk mmu-miR-761 54 82 ACACAG-----UCAAAGUGGGA-CGACG- |||: || |||| ||||| -AUGUUUCCUGAGGAGUUCCCUGGCUGCA Btk; Bpk mmu-miR-762 60 96 CGAGAC------AGGG---------CCGGGGUCGGGG- ||| |||| |||:|:||||:: --CCUGAGGAGUUCCCUGGCUGCAGGGCUCUAGCCUUC Btk; Bpk mmu-miR-763 283 305 CGGUGACCAAGAAGG--GUCGACC ||||| ||| ||| ||||| UCCACUAGUUG-UCCAACAGCUU- Btk; Bpk mmu-miR-764-3p 3 30 UGUCAACGG--UGA--UACC-GGAGGA- :| |||: :|| :||| :||||| -UGGCUGCUAAGCUCCGUGGAUCUCCUC Btk; Bpk mmu-miR-9 162 184 -GUAUGUCGAUCUAUUGGUUUCU- ||||| ||| ||| |||||: GCAUACUGCUC--UAAGCAAAGGU Btk; Bpk mmu-miR-188 185 192 -------------------UGGGAGGUGGUA-C-GUUCCCUAC :|:|| :| | |||||||| UCUCGUUCCCUGGCAUACUGCUCUAAGCAAAGGUCAAGGGAUU Btk; Bpk mmu-miR-384 132 139 AC--------------------------ACUUGUUAAAGAUCCUUA ||:||| ||||||||| AUGCGCCUACUGAAUGCAUGAAGAGCCCUGGACA---UCUAGGAAUG Btk; Bpk mmu-miR-684 266 273 --------------------------AACUGAACUUCCCUUUUGA |||: |:|||||||||| CAGACUGAAUUGGGGAUGGGAACACUUUGGG--GGAGGGAAAACUG Btk; Bpk mmu-miR-690 88 95 AA-------------------ACCAACA-CUC-GGAUCGGAAA ||| || |:| :|||||||| CAUGUUUCCUGAGGAGUUCCCUGGCUGCAGGGCUCUAGCCUUC Btk; Bpk mmu-miR-10a 63 86 gUGUUUAAG---CCUAGAUGUCCCau | :|:||| || ||:||||| gAGGAGTTCCCTGG--CTGCAGGGct Btk; Bpk mmu-miR-10b 62 84 ugUGUUUAAG---CCAAGAUGUCCC | :|:||| || ||:||||| tgAGGAGTTCCCTGG--CTGCAGGG Btk; Bpk mmu-miR-127 8 27 CGGUUCGAGUCUGCCUAGgcu ||:|||||| | :||||| GCTAAGCTCCG-TGGATCtcc Btk; Bpk mmu-miR-128a 239 260 uuuuCUCUGGCCAAGUGACACu |:||: || |||| || attgGGGATGGGAACACTTTGg Btk; Bpk mmu-miR-128b 237 260 CUU--UCUCUGGCCAAGUGACACu ||| :|:||: || |||| || GAATTGGGGATGGGAACACTTTGg Btk; Bpk mmu-miR-145 259 277 uuCCCUAAGGACCCUUUUGACCUg |||| |||||||||| | ggGGGA-----GGGAAAACTGTAa Btk; Bpk mmu-miR-18 84 106 auAGA-CGUGAUCUACGUGGAau ||| || :| ||||:||| gcTCTAGCCTTCCATGCGCCTac Btk; Bpk mmu-miR-181b 94 114 gGGUG-GCUGUCGUUACUUACaa |||: || | :| |||||| tCCATGCGCC--TACTGAATGca Btk; Bpk mmu-miR-185 135 155 CUUGACGGA---AAGAGAGgu |:| ||||| ||||||| GGAATGCCTTTCTTCTCTCgt Btk; Bpk mmu-miR-188 166 192 UGG-GAGGU--GGUAC--GUUCCCUAc ||: |||:| | | | |||||||| ACTGCTCTAAGCAAAGGTCAAGGGATt Btk; Bpk mmu-miR-194 358 380 AGGUGUACCUCAAC--GACAAUGU |: | |||| |||| :||||||| TTAAAATGG-GTTGTTTTGTTACA Btk; Bpk mmu-miR-199a 237 261 CUUGUCCAUCAGACUUGUG--ACCC |||: || : | |||||| |||| GAATTGGGGATGGGAACACTTTGGG Btk; Bpk mmu-miR-211 242 269 uCCGUUUCCU------ACUGUUUCCCUU || | :||| ||: ::|||||| gGGGATGGGAACACTTTGGGGGAGGGAA Btk; Bpk mmu-miR-214 87 109 GA-CGGACAG-ACACGGACGACa || |||| | || |||| ||| CTAGCCTTCCATGCGCCTACTGa Btk; Bpk mmu-miR-215 165 186 caGAC-AGUUUAGUAUCCAGUa ||| || || || |||||| taCTGCTCTAAGCAAAGGTCAa Btk; Bpk mmu-miR-217 58 84 uAGGUC-AGUCAA-GGA-CUACGUCau ||| | |||| ||| | ||||| tTCCTGAGGAGTTCCCTGGCTGCAGgg Btk; Bpk mmu-miR-294 230 258 UGUGUGUUUU---CCCU----UCGUGAAA ||| || :|| |||| | |||||| ACAGACTGAATTGGGGATGGGAACACTTT Btk; Bpk mmu-miR-296 327 347 ugucCUAACUCCCCCCCggga |:| | ||||||| tggtGGTGGTGGGGGGGtagg Btk; Bpk mmu-miR-298 59 81 ccuuCUUGUCGGGAGGA--GACGg ||: ||::| ||| |||| tcctGAGGAGTTC-CCTGGCTGCa Btk; Bpk mmu-miR-300 79 99 CUUCUCUCGAACGGGAACGUAu | ||:| || | |||| ||| GCAGGGCTCTAG-CCTTCCATg Btk; Bpk mmu-miR-302 232 258 agUGGUUU----UGUACCUUCGUGAAu ||::|| : ||||:| ||||| agACTGAATTGGGGATGGGAACACTTt Btk; Bpk mmu-miR-302b 103 126 GAUGAUUU-UGUAC-CUUCGUGAa |||||:|| :|||| :||| || CTACTGAATGCATGAAGAGCCCTg Btk; Bpk mmu-miR-302c 103 127 GGUGACUU-UGUACCU-UCGUGAac |:|||||| :|||| | ||| || CTACTGAATGCATGAAGAGCCCTgg Btk; Bpk mmu-miR-324-3p 320 338 ggUCGUCGUGGACC-CCGUCACC ||::| ||| ||::|||| agAGTGG----TGGTGGTGGTGG Btk; Bpk mmu-miR-33 95 115 GUUACGUUGAUG--UUACGUg | ||||: |||| |||||| CCATGCGCCTACTGAATGCAt Btk; Bpk mmu-miR-351 53 85 GUCCGA--GUUUCC-CGAG-----GA-GUCCCu || |:| | :||| |:|| || ||||| CATGTTTCCTGAGGAGTTCCCTGGCTGCAGGGc Btk; Bpk mmu-miR-370 58 84 uuGG--UC--CAAGGUGGGGUCGUCCg || || ||||| : | ||||| ttCCTGAGGAGTTCCCTGGCTGCAGGg Btk; Bpk mmu-miR-382 279 305 gcuuAGGUGGU-----GCUUGUUGAAg |||||:| | ||||:||| tagcTCCACTAGTTGTCCAACAGCTTg Btk; Bpk mmu-miR-384 123 139 acACUUGUUAAAGAUCCUUA ||:||| ||||||||| ccTGGACA---TCTAGGAAT Btk; Bpk mmu-miR-412 319 341 UGCCGAUCACCUGGUCCACUUCa | | |:|||| ||||::| AAGAGTGGTGGTGGTGGTGGGGg Btk; Bpk mmu-miR-431 60 86 GGACGUACU-----GCCGGACGUUCUGu |||| | || | | |||||:|:| CCTG-AGGAGTTCCCTGGCTGCAGGGCt Btk; Bpk mmu-miR-449b 73 93 GGUCGAUCGUUACGUGA-CGGA |::||| |||: || || |||| CTGGCT-GCAGGGCTCTAGCCT Btk; Bpk mmu-miR-465-3p 102 129 aGAUGAAU------CUUUCCGGGACuag ||||| | |||: |||||| cCTACTGAATGCATGAAGAGCCCTGgac Btk; Bpk mmu-miR-470 284 301 aGUGGUCACGGUCAGGUUCUu |||:||| |||||| | cCACTAGT---TGTCCAACAg Btk; Bpk mmu-miR-483 241 268 uguuCUGCCCU-----CCCCUCCUCACU ||:|||| ||:|||| || tgggGATGGGAACACTTTGGGGGAGGGA Btk; Bpk mmu-miR-488* 127 148 CUG--GUUCUUUGUCGGAAAGuu ||| | ||:||: ||||||| GACATCTAGGAAT-GCCTTTCtt Btk; Bpk mmu-miR-503 62 82 cgUCAUGACAAGGG--CGACGau || | |||||| ||||| tgAGGA--GTTCCCTGGCTGCag Btk; Bpk mmu-miR-541 118 144 aCACUGG--UUGUAG--UCUUAGGGAA | | || :||||| :|||| |||| aGAGCCCTGGACATCTAGGAATGCCTT Btk; Bpk mmu-miR-551b 347 370 gUGACUUUGGU--UCAUACCCAGC | || :||| | ||||||:| gAATGTTGCCATTAAAATGGGTTG Btk; Bpk mmu-miR-615 61 84 uuCUCCCUCUGGGUCCGA-G-CCu |||| : ||| |||| | || ctGAGGAGTTCCCTGGCTGCAGGg Btk; Bpk mmu-miR-652 78 106 ACGUGUUGGGAUC---A---CCGCGGuaa |||| ::|:|||| | ||||| TGCAGGGCTCTAGCCTTCCATGCGCCtac Btk; Bpk mmu-miR-671 76 97 gGAGGUCGGGGAGGUCCCGAAGGa || ||| |||:| | ||||| gCTGCAG-GGCTCTA-GCCTTCCa Btk; Bpk mmu-miR-675-5p 76 104 uGAC-ACCCGGGA----AAGG--CGUGGu ||| ||||:|| |||| ||:|| gCTGCAGGGCTCTAGCCTTCCATGCGCCt Btk; Bpk mmu-miR-681 67 87 UCGACGGACGGUCGCUCCGAc ||:| |||| | || :|||| AGTTCCCTGGCTGCAGGGCTc Btk; Bpk mmu-miR-683 63 83 CUCCUGUGUCGAAUGUCGUCC ||||| : || :| ||||| GAGGAGTTCCCTGGCTGCAGG Btk; Bpk mmu-miR-684 251 273 aacUGAA----CUUCCCUUUUGA |||| |:|||||||||| aacACTTTGGGGGAGGGAAAACT Btk; Bpk mmu-miR-690 72 95 aaACCAAC-ACUCG-GAUCGGAAa ||| || |:|| |||||||| ccTGGCTGCAGGGCTCTAGCCTTc Btk; Bpk mmu-miR-697 223 250 aGAGG--UGUC---CU--GGUCCUACaa |||| |||| || : :||||| aCTCCTAACAGACTGAATTGGGGATGgg Btk; Bpk mmu-miR-702 321 341 CUCGCC-CCAUUUCCCACCCgu |||:|| ||| :: |||||| GAGTGGTGGT-GGTGGTGGGgg Btk; Bpk mmu-miR-709 12 30 agGAGG-ACGGAGACGGAGG |||| || ||| ||||| agCTCCGTGGATCT-CCTCC Btk; Bpk mmu-miR-741 126 154 gaUGUA---UCUUAC----CGUAGAGAGu |||| :||||| | |||||| ggACATCTAGGAATGCCTTTCTTCTCTCg Btk; Bpk mmu-miR-744 76 101 CGAC-AAUCGGGAUCGG--GG--CGu |||| :||:|||||| || || GCTGCAGGGCTCTAGCCTTCCATGCg Btk; Bpk mmu-miR-761 55 80 ACACAG------UCAAAGUGGGA-CGACG ||| || |||| |||| ||||| TGTTTCCTGAGGAGTT---CCCTGGCTGC Btk; Bpk mmu-miR-761 81 109 aCAC-AG-UC--AAAGU--G-GGACGACg | | || || || || | ||| ||| aGGGCTCTAGCCTTCCATGCGCCTACTGa Btk; Bpk mmu-miR-762 70 94 cGAGACAGG-G--CCGGGGUCGGgg | ||| |: | |||:|:|||| tCCCTGGCTGCAGGGCTCTAGCCtt Btk; Bpk mmu-miR-763 283 305 cGGUGACCAAGAAG-GGUCGAcc ||||| ||| | | ||||| tCCACTAGTTGTCCAACAGCTtg Btk; Bpk mmu-miR-764-3p 2 28 uguCAACGGU--GA--UACC-GGAGGA | |||:| || :||| :||||| ctgGCTGCTAAGCTCCGTGGATCTCCT Btk; Bpk mmu-miR-770-3p 278 300 ggUCGAGGUG--CAGUCCGGGUGc |||||||| ||: | || || atAGCTCCACTAGTT-GTCCAACa Btk; Bpk mmu-miR-9 163 182 GUAUGUCGAUCUAUUGGUUUCu ||||| ||| ||| ||||| CATACTGCT--CTAAGCAAAGg

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Btk RAID00755367 mmu-miR-8119 miRNA MIMAT0031425 Btk mRNA 12229 Prediction 0.1828 Btk RAID00962611 mmu-miR-6896-5p miRNA MIMAT0027692 Btk mRNA 12229 Prediction 0.1828 Btk RAID01266863 mmu-miR-1247-3p miRNA MIMAT0014801 Btk mRNA 12229 Prediction 0.1828 Btk RAID01436788 mmu-miR-3569-3p miRNA MIMAT0029855 Btk mRNA 12229 Prediction 0.1828 Btk RAID01455650 mmu-miR-544-3p miRNA MIMAT0004941 Btk mRNA 12229 Prediction 0.1828 Btk RAID01556177 mmu-miR-7045-3p miRNA MIMAT0027995 Btk mRNA 12229 Prediction 0.1828 Btk RAID01808955 mmu-miR-7232-5p miRNA MIMAT0028432 Btk mRNA 12229 Prediction 0.1828 Btk RAID01889873 mmu-miR-7226-5p miRNA MIMAT0028420 Btk mRNA 12229 Prediction 0.1828 Btk RAID02254094 mmu-miR-384-3p miRNA MIMAT0001076 Btk mRNA 12229 Prediction 0.1828 Btk RAID02442791 mmu-miR-182-5p miRNA MIMAT0000211 Btk mRNA 12229 Prediction 0.1828 Btk RAID02623156 mmu-miR-590-3p miRNA MIMAT0004896 Btk mRNA 12229 Prediction 0.1828 Btk RAID02862530 mmu-miR-494-3p miRNA MIMAT0003182 Btk mRNA 12229 Prediction 0.1828 Btk RAID03206453 mmu-miR-185-5p miRNA MIMAT0000214 Btk mRNA 12229 Prediction 0.1828 Btk RAID03219174 mmu-miR-7012-5p miRNA MIMAT0027928 Btk mRNA 12229 Prediction 0.1828 Btk RAID03282094 mmu-miR-882 miRNA MIMAT0004847 Btk mRNA 12229 Prediction 0.1828 Btk RAID03364905 mmu-miR-8113 miRNA MIMAT0031419 Btk mRNA 12229 Prediction 0.1828 Btk RAID03376845 mmu-miR-7057-5p miRNA MIMAT0028018 Btk mRNA 12229 Prediction 0.1828