DNA & RNA Element - miRNAMap |
Gene Name | Mature miRNA | Target Start | Target End | miRNA 3-5 | Alignment | Target 5-3 |
Usp5; Isot | mmu-let-7b | 449 | 476 | UUGGUGUGU----UGGAU-GAUGGAGU- | |||||| :|| ||:||||| | -CCCACACCCUUUGCCCUUCUGCCUCAG |
Usp5; Isot | mmu-let-7c | 453 | 476 | UUGGU--AUGUUGGAUGAUGGAGU- | ||| |:| ||| ||:||||| | CACCCUUUGC--CCUUCUGCCUCAG |
Usp5; Isot | mmu-let-7e | 456 | 476 | UGAUAUGUUGGAGGAUGGAGU- | || |:| |||:||:||||| | CCUUUGC--CCUUCUGCCUCAG |
Usp5; Isot | mmu-let-7f | 456 | 476 | UGAUAUGUUAGAUGAUGGAGU- | || |:| || ||:||||| | CCUUUGCC--CUUCUGCCUCAG |
Usp5; Isot | mmu-let-7i | 200 | 222 | -UGUCGUGUUUGA-UGAUGGAGU | |||| | :::| |||:||| | GACAGGAGGGGCCAACUGCCUG- |
Usp5; Isot | mmu-miR-125a | 28 | 70 | GUGUCCAAU---------------UUCCCA---GAGUCCCU | :|||| | :|||| || ||||| | AGCAGGGGACAGACCAUCUGGCAUGAGGGACGGCUGAGGGAU |
Usp5; Isot | mmu-miR-125b | 416 | 438 | AGUGUUCAAUCCCAGAGUCCCU- | :||: ||| ||| ||||| | -GGCAGAGGAGGCUCUGAGGGAA |
Usp5; Isot | mmu-miR-128a | 202 | 233 | -UUUUCUCUGGC-------CAAGUGACACU- | |::||:|:|| || ||| |||: | CAGGAGGGGCCAACUGCCUGUCCACAGUGGG |
Usp5; Isot | mmu-miR-133a | 189 | 216 | -UGUCG--ACCAA--CUUCCCCUGGUU- | :||| ||| |:||||| |||| | AGCAGGGAUGGGACAGGAGGGG-CCAAC |
Usp5; Isot | mmu-miR-133b | 188 | 216 | AUCG-----ACCAA--CUUCCCCUGGUU- | ||| ||| |:||||| |||| | GAGCAGGGAUGGGACAGGAGGGG-CCAAC |
Usp5; Isot | mmu-miR-134 | 461 | 486 | -GGGGAGACC-AGUUGG---UCAGUGU | |||:|||| |||:|| :||| | GCCCUUCUGCCUCAGCCUCCGGUCU-- |
Usp5; Isot | mmu-miR-140* | 394 | 416 | AGGCACCAA-GAUGGGACACCAU- | ||| || ||:||||||: | --AGUGUUUGCUCCCUUGUGGUGG |
Usp5; Isot | mmu-miR-141 | 99 | 123 | GGUAGAAAU---GGUCUGUCACAAU- | :|:|||: |||| ||||| | | -UGUUUUUGUCCCCAG-CAGUGGGAA |
Usp5; Isot | mmu-miR-149 | 187 | 215 | CCUCA---CU--UCUGUG--CCUCGGUCU | ||| || :|||| ||:|||| | AGAGCAGGGAUGGGACAGGAGGGGCCAA- |
Usp5; Isot | mmu-miR-150 | 178 | 203 | GUGACCA-UGU----UCCCAACCCUCU | |||| ||| |||| ||||| | -UCUGGGGACAGAGCAGGGAUGGGAC- |
Usp5; Isot | mmu-miR-181a | 316 | 343 | UGAGUGGCUGU-CGCA---ACUUACAA | ||:||| |:|| ||:|||| | UCUUACCUGUGUGUGUGUGUGGAUGUG |
Usp5; Isot | mmu-miR-184 | 460 | 487 | -UGGGAAU----AGUCAAGAGGC-AGGU | :||||| |||| ||||| ||: | UGCCCUUCUGCCUCAGC-CUCCGGUCUG |
Usp5; Isot | mmu-miR-188 | 13 | 38 | -UGGG-AGGUGGUA--CGUUCCCUAC | :||| |||||: |||:|||| | AGCCCUUCCACUUGAAGCAGGGGAC- |
Usp5; Isot | mmu-miR-194 | 221 | 245 | -AGGUGUA--CCU----CAACGACAAUGU | |||||| ||| |||||| | GUCCACAGUGGGACCUUGUUGCUU----- |
Usp5; Isot | mmu-miR-196b | 199 | 223 | GGUUGUUGUCCU---UUGAUGGAU- | :|||: |||: ||||:|||: | -GGACAGGAGGGGCCAACUGCCUGU |
Usp5; Isot | mmu-miR-199a | 198 | 234 | -CUUGUCCAUCA---------GACU--UGUGACCC- | |:||||| :| ||| ||| |||| | GGGACAGGAGGGGCCAACUGCCUGUCCACAGUGGGA |
Usp5; Isot | mmu-miR-199b | 158 | 185 | -CUUGUCCAUCAG--AUUUGUGACCC- | |:| :|||| || ||:|| ||||| | AGGAGGGGUACUCAUUAGACUCUGGGG |
Usp5; Isot | mmu-miR-200a | 103 | 123 | UGUAGCAAUGGUCUGUCACAAU- | |:|| |||| ||||| | | --UUUGUCCCCAG-CAGUGGGAA |
Usp5; Isot | mmu-miR-204 | 414 | 439 | GUCCGUAUCCUACUGU--UUCCCUU- | :|||| |||| |:| :|||||| | GGGGCAGAGGA-GGCUCUGAGGGAAA |
Usp5; Isot | mmu-miR-207 | 180 | 213 | CUCCCU--------CCU-CUCGGUCCUCUUCG- | :|||| ||| |:| |||||| || | UGGGGACAGAGCAGGGAUGGGACAGGAGGGGCC |
Usp5; Isot | mmu-miR-211 | 414 | 439 | -UCCGUUUCCUACUGU--UUCCCUU- | :||||:|||| |:| :|||||| | GGGGCAGAGGA-GGCUCUGAGGGAAA |
Usp5; Isot | mmu-miR-214 | 214 | 243 | -GACGGACAGA---CAC----GGACGACA | ||||||||| ||| |:||:|| | ACUGCCUGUCCACAGUGGGACCUUGUUGC |
Usp5; Isot | mmu-miR-291a-3p | 145 | 171 | -CCGUG-UGUUUCACCU--UCGUGAAA | ||| |||||| ||| :|:||| | UGGCCAAACAAAGAGGAGGGGUACUC- |
Usp5; Isot | mmu-miR-296 | 189 | 214 | -UGUCCUAACUC---CC-CCCCGGGA | :||||: ||:| || |||||| | AGCAGGGAUGGGACAGGAGGGGCCA- |
Usp5; Isot | mmu-miR-298 | 65 | 92 | -CCU-UCUU--GUCGGG-AGGAGACGG | ||| :|| |||||| | |||||: | GGGAUGGACUUCAGCCCCUGCUCUGUA |
Usp5; Isot | mmu-miR-31 | 339 | 361 | GUCGAUACGGU---CGUAGAACGGA | |: ||: ||||||| || | -UGUG--GCUUUAUGCAUCUUUCCA |
Usp5; Isot | mmu-miR-320 | 457 | 485 | -AAGCGGGA-----GAGUUGGG--UCGAAAA | ||:||||| ||||:||: :|: | CUUUGCCCUUCUGCCUCAGCCUCCGGUC--- |
Usp5; Isot | mmu-miR-324-3p | 109 | 142 | -GGUCGUCG-------UGGACC-CC-GUCACC- | |||||||: | |||| || || || | CCCAGCAGUGGGAAGGAGCUGGAGGUCAUAGGA |
Usp5; Isot | mmu-miR-328 | 193 | 215 | UGCCUUCCC-GUCUCUCCCGGUC | ||| ||| |||: :|||||| | -GGGAUGGGACAGGAGGGGCCAA |
Usp5; Isot | mmu-miR-337 | 46 | 67 | UUUCCGUAGUAUAUCCU--CGACUU- | ||||| | :||| |||||: | --UGGCAUGA---GGGACGGCUGAGG |
Usp5; Isot | mmu-miR-339 | 395 | 426 | -ACU--CGAGG----ACC-UCCUGUC-CCU- | || ||||| ||| :||:||| ||| | GUGUUUGCUCCCUUGUGGUGGGGCAGAGGAG |
Usp5; Isot | mmu-miR-340 | 46 | 74 | -CCGAUAUUUCA--UUGACU--CUGCCU- | ||| ||:|:| ::|||| ||:||| | UGGC-AUGAGGGACGGCUGAGGGAUGGAC |
Usp5; Isot | mmu-miR-342 | 308 | 340 | -CUGCCC--------ACGCUAAAGACACACUCU- | |:|||| ||:| | |||||| || | GGGCGGGCUCUUACCUGUGUG-UGUGUGUG-GAU |
Usp5; Isot | mmu-miR-345 | 47 | 81 | -CGUGA--CCUGA----UCCCC------AGUCGU | |||: |||| |||| ||||| | GGCAUGAGGGACGGCUGAGGGAUGGACUUCAGCC |
Usp5; Isot | mmu-miR-346 | 155 | 194 | -UCUCCG-UCCGUGAG-----------CCC-GUCU-GU- | ||||| :||:|||| ||| |||| || | AAGAGGAGGGGUACUCAUUAGACUCUGGGGACAGAGCAG |
Usp5; Isot | mmu-miR-34a | 183 | 221 | -UUGUUG------------GUCGAUUCUG--UGACGGU | :|||: ||| ::|:| |||||| | GGACAGAGCAGGGAUGGGACAGGAGGGGCCAACUGCCU |
Usp5; Isot | mmu-miR-34b | 201 | 223 | GUUAGUCGAUUAAUG-UGACGGAU- | ||| :: |||||||: | ---ACAGGAGGGGCCAACUGCCUGU |
Usp5; Isot | mmu-miR-34c | 204 | 225 | CGUUAGUCGAUUGAUGUGACGGA | :| :|| ||||:| |||:| | -GGAGGGGCCAACUGC-CUGUCC |
Usp5; Isot | mmu-miR-351 | 414 | 438 | GUCCGAGUUUC-CCGAGGAGUCCCU- | :||| :|:| |||||: ||||| | GGGGCA-GAGGAGGCUCUG-AGGGAA |
Usp5; Isot | mmu-miR-370 | 12 | 35 | -UUGGUCCAAGGUGGGG-UCGUCCG | |:|| ||||||:: |||||| | CAGCCC--UUCCACUUGAAGCAGGG |
Usp5; Isot | mmu-miR-376b | 333 | 352 | UUUCACCUACAAGGAGAUACUA | |||||||| ||:|||| | --UGUGGAUGUGGCUUUAUGC- |
Usp5; Isot | mmu-miR-378 | 121 | 144 | UGUGUCCUGGACCUCA---GUCCUC- | |||| |||||| :||||| | ---AAGGAGCUGGAGGUCAUAGGAGA |
Usp5; Isot | mmu-miR-383 | 473 | 499 | -UCGGU-GUCAGU--GGAAGACUAGA | |||| |:||| |:|| ||:|| | CAGCCUCCGGUCUGUCUUUAUGGUCC |
Usp5; Isot | mmu-miR-423 | 159 | 193 | GACUCCCCGG----AGUCUGG---------CUCGA | ||||||: |:||||: |||| | -GGAGGGGUACUCAUUAGACUCUGGGGACAGAGCA |
Usp5; Isot | mmu-miR-455-3p | 322 | 355 | UCACAUAUACGGGCACCUG---------ACGUA- | |||:|:||: :|||||: ||||| | -CUGUGUGUGUGUGUGGAUGUGGCUUUAUGCAUC |
Usp5; Isot | mmu-miR-465-3p | 405 | 434 | AGAUGAA---UCU-----UUCCGGGACUAG | || | :|: :||||:|||| | CCUUGUGGUGGGGCAGAGGAGGCUCUGAG- |
Usp5; Isot | mmu-miR-466 | 315 | 338 | CAGAAU--ACACACGCACAUACAUA | ||||| ||||||:||||:|| | CUCUUACCUGUGUGUGUGUGUGG-- |
Usp5; Isot | mmu-miR-467* | 302 | 323 | GUAUAUGUACGUCCGUGAAUG- | ||:|: : ||:||| ||||| | GAUGUGGG-GCGGGCUCUUACC |
Usp5; Isot | mmu-miR-467a | 303 | 338 | CACAUCC-------------ACACACAUACAUAUA | |||:|| |||||||:|||:|: | AUGUGGGGCGGGCUCUUACCUGUGUGUGUGUGUGG |
Usp5; Isot | mmu-miR-483 | 189 | 212 | -UGU-UCUGCCCUCCCCUCCUCACU | :|| :||:|||| |||||:| | AGCAGGGAUGGGACAGGAGGGGC-- |
Usp5; Isot | mmu-miR-484 | 361 | 383 | UAGCCCUCCC---CUGACUCGGACU | ||||||| ||||| |||| | --GGGGAGGGAGCGACUGCGCCUC- |
Usp5; Isot | mmu-miR-485-5p | 471 | 493 | CUUAAGU---AGUGCCGGUCGGAGA- | ||| || |||:| |:||:| | ---CUCAGCCUC-CGGUCUGUCUUUA |
Usp5; Isot | mmu-miR-486 | 176 | 208 | -GAG-CCCC-GUCGAGUCA------UGUCCU- | ||| |||| ||| ||| |||||| | ACUCUGGGGACAGAGCAGGGAUGGGACAGGAG |
Usp5; Isot | mmu-miR-491 | 426 | 455 | GGAGUA--CCU---UCCCA--AGGGGUGA | ||| ||| ||| ||||||| | GCUCUGAGGGAAAUAGGACCCUCCCCACA |
Usp5; Isot | mmu-miR-496 | 139 | 173 | -CUCUAACCGGUACA----------UUAUGAGU- | |||| |||||| ::|||||| | GGAGAAUGGCCAAACAAAGAGGAGGGGUACUCAU |
Usp5; Isot | mmu-miR-497 | 215 | 245 | -AUGUUU-GGUGUCAC------ACGACGAC | |:| |||||||| ||:|||| | CUGCCUGUCCACAGUGGGACCUUGUUGCUU |
Usp5; Isot | mmu-miR-501 | 402 | 426 | AAAGUGGGU-----CCCUGUUUCCUAA | || ||: |||:||:|||| | -CUC-CCUUGUGGUGGGGCAGAGGAG- |
Usp5; Isot | mmu-miR-540 | 29 | 51 | GGUCCUAG--CUGG-AGACUGGA | ||||: |||| ||||:| | GCAGGGGACAGACCAUCUGGCA- |
Usp5; Isot | mmu-miR-542-3p | 471 | 490 | AAAGUCAAUAGUUAGACAGUGU | |||| |::|||||| | -CUCAGCCUCCGGUCUGUCU-- |
Usp5; Isot | mmu-miR-665 | 61 | 86 | -AUUCCCU----GGAGUCGGAGGACCA | |:||||| |:|||||| |||| | CUGAGGGAUGGACUUCAGCC-CCUGC- |
Usp5; Isot | mmu-miR-670 | 41 | 71 | AAGUGG--UGUAUG------UGAGUCCCUA- | ||:| :|||: :|| |||||| | -CCAUCUGGCAUGAGGGACGGCUGAGGGAUG |
Usp5; Isot | mmu-miR-672 | 450 | 476 | -GUGUGUGUCAUGUGGU---UGGAGU- | ||||| | |:| || :||||| | CCACACCCUUUGC-CCUUCUGCCUCAG |
Usp5; Isot | mmu-miR-673 | 176 | 202 | -GAGGUUCCUGGUCUCGA--C-ACUC- | |||: ||| |||||| | ||:| | ACUCUGGGGA-CAGAGCAGGGAUGGGA |
Usp5; Isot | mmu-miR-674* | 97 | 131 | -AACAAG-------------ACUCUACCCUCGACAC | |||||: ||:|| ||||||| | UUUGUUUUUGUCCCCAGCAGUGGGAA-GGAGCUGG- |
Usp5; Isot | mmu-miR-675-5p | 59 | 95 | -UGACACCC------------GGGAA-AGGCGUGGU | :||| ||| |||| ||:|:||| | GGCUGAGGGAUGGACUUCAGCCCCUGCUCUGUACCC |
Usp5; Isot | mmu-miR-676 | 289 | 315 | -UCGAGUUGUUGGA----GUCCUGCC- | :|| |||| ||| ::||:||| | UGGCCCAACC-CCUGAUGUGGGGCGGG |
Usp5; Isot | mmu-miR-683 | 180 | 210 | -CUCCUGUGUCGAA-------UGUCGUCC- | |:||||| ||| |||| ||| | UGGGGACAGAGCAGGGAUGGGACAGGAGGG |
Usp5; Isot | mmu-miR-687 | 344 | 368 | AGUAACGACGUA---AGGUCCUAUC- | || ||||| |||||| || | --CUUUAUGCAUCUUUCCAGGGGAGG |
Usp5; Isot | mmu-miR-689 | 174 | 200 | CCUGGGGCGG----CUCGCCCCUGC- | |||:|:| |||| ||||:| | AGACUCUGGGGACAGAGCAGGGAUGG |
Usp5; Isot | mmu-miR-691 | 464 | 507 | AAAAGACGGAG-------------AGAAGU---------CCUUA | ||||||||| ||||:| |||| | -CUUCUGCCUCAGCCUCCGGUCUGUCUUUAUGGUCCUCUGGAAA |
Usp5; Isot | mmu-miR-693-5p | 327 | 347 | CUUUUGAAA-GCCUACACCGAC | : | :|||||||||| | --UGUGUGUGUGGAUGUGGCUU |
Usp5; Isot | mmu-miR-697 | 177 | 200 | AGAGGUGUCCUGG-----UCCUACAA | :| :|||| :||||| | --CUCUGGGGACAGAGCAGGGAUGG- |
Usp5; Isot | mmu-miR-699 | 196 | 222 | -GCUCGGUCCAGCG----UGACGGA- | :|:| |||| | ||||||| | AUGGGACAGGAGGGGCCAACUGCCUG |
Usp5; Isot | mmu-miR-700 | 308 | 330 | -CCACCUGAGCCAAGGGCGCAC- | || ||:||| ||:|:||| | GGGCGGGCUCUUA-CCUGUGUGU |
Usp5; Isot | mmu-miR-701 | 40 | 66 | AGGUAGAUAAAG---UC-GCCGAUU- | ||||||: :| |||||:| | ACCAUCUGGCAUGAGGGACGGCUGAG |
Usp5; Isot | mmu-miR-705 | 2 | 26 | ACGGGUGGG-GU--GGAGGGUGG- | |||::||| || |||:||||: | AGCCUGCCCUCAGCCCUUCCACUU |
Usp5; Isot | mmu-miR-709 | 462 | 482 | AGGAGGACGGAGACGGAGG- | |||:||||||| |||||| | CCCUUCUGCCUCAGCCUCCG |
Usp5; Isot | mmu-miR-712 | 32 | 59 | -CCA----UGGCGGGCCC-ACUUCCUC | || ||| :|:|| |||:||| | GGGGACAGACCAUCUGGCAUGAGGGAC |
Usp5; Isot | mmu-miR-712* | 293 | 319 | -GUUGUGGGC----CCCCA-CUGAGCGU | |||| ||:| |||| |:||| | CCAACCCCUGAUGUGGGGCGGGCUCU-- |
Usp5; Isot | mmu-miR-714 | 369 | 389 | -CGCUGGC-UGGCCGGGAGCAGC | |||||:| :|| ||||| | AGCGACUGCGCCUCCCCUCC--- |
Usp5; Isot | mmu-miR-715 | 302 | 340 | GUGCGCCCC---------------CACACGU--GCCUC | |:|:|||| |||||:: :||| | GAUGUGGGGCGGGCUCUUACCUGUGUGUGUGUGUGGAU |
Usp5; Isot | mmu-miR-718 | 38 | 67 | GCU-GUGGGCCGG---CCC-GCC--UUC- | || ||:|:||| ||| ||| :|| | AGACCAUCUGGCAUGAGGGACGGCUGAGG |
Usp5; Isot | mmu-miR-743 | 465 | 493 | -AGAU-GAGUCGAA--CCA--CAGAAA- | |||: |||||| ||| |||||| | UUCUGCCUCAGCCUCCGGUCUGUCUUUA |
Usp5; Isot | mmu-miR-744 | 59 | 87 | -CGACAAUCG----GGA-UCGGGG-CGU | |||| :| |:| |||||| || | GGCUGAGGGAUGGACUUCAGCCCCUGCU |
Usp5; Isot | mmu-miR-761 | 219 | 244 | ACACAG---UCAAAGUGGGACGACG- | |||| ||| |||:||:||| | -CUGUCCACAGUGGGACCUUGUUGCU |
Usp5; Isot | mmu-miR-762 | 456 | 482 | CGAGACAGGGC---CGGGGUCGG-GG- | ||:|| ||| |||:||||| || | CCUUUG-CCCUUCUGCCUCAGCCUCCG |
Usp5; Isot | mmu-miR-763 | 77 | 121 | -CGGUGAC---------------CAAGAA---GGGUCG--ACC | ||| ||| |||:|| |||||| ||| | AGCCCCUGCUCUGUACCCUUUUUGUUUUUGUCCCCAGCAGUGGG |
Usp5; Isot | mmu-miR-764-3p | 479 | 503 | UGUCA-ACGGUGAUACC-GGAGGA | |:|| ||:| ||||| ||||: | CCGGUCUGUCUUUAUGGUCCUCUG |
Usp5; Isot | mmu-miR-770-3p | 264 | 297 | -GGU----CGAGGUGCAGU-------CCGGGUGC | ||| ||||::| || |||||| | UCCACAGUGCUCUGCUUCUCUGUGAUGGCCCAA- |
Usp5; Isot | mmu-miR-804 | 356 | 381 | -AGGUCCAC-UCCUUGUUGA-GUGU | |||||| :|||:|:||| |:| | UUCCAGGGGAGGGAGCGACUGCGCC |
Usp5; Isot | mmu-miR-96 | 188 | 216 | -UCGUUUUUACA----CGAUCACGGUUU | ||||:::||| | :| ||||| | GAGCAGGGAUGGGACAGGAGGGGCCAAC |
Usp5; Isot | mmu-miR-331 | 358 | 365 | AAGAU--------CCUAU-CC-------------GGGUCCCCG | ||||: || :||||||| | UGUGUGUGUGUGUGGAUGUGGCUUUAUGCAUCUUUCCAGGGGA |
Usp5; Isot | mmu-miR-34b | 214 | 221 | GUUA-------------------GUCGAUUAAUG--UGACGGAU | ||| |: :| |||||||: | CUGGGGACAGAGCAGGGAUGGGACAGG-AGGGGCCAACUGCCUGU |
Usp5; Isot | mmu-miR-465-3p | 298 | 305 | -----------AGAUGAAU-----CUUUCC------GGGACUAG | |||:||| || || ||||||| | AUCCACAGUGCUCUGCUUCUCUGUGAU-GGCCCAACCCCUGAUG |
Usp5; Isot | mmu-miR-485-5p | 473 | 480 | CUUAAGU---------------------AGUGCCGGUCGGAGA | || :||||||| | AUAGGACCCUCCCCACACCCUUUGCCCUUCUGCCUCAGCCUCC |
Usp5; Isot | mmu-miR-491 | 447 | 454 | G--------------GAGUA--CCU---UCCCA--AGGGGUGA | ||| ||| ||| ||||||| | GUGGGGCAGAGGAGGCUCUGAGGGAAAUAGGACCCUCCCCACA |
Usp5; Isot | mmu-miR-693-5p | 339 | 346 | CUUUUGAAA----------------------GCCUACACCGAC | :|||||||||| | UGUGGGGCGGGCUCUUACCUGUGUGUGUGUGUGGAUGUGGCUU |
Usp5; Isot | mmu-miR-709 | 467 | 474 | A-----------------------GGAGGAC-GGAGACGGAGG | |||:: |:|||||||| | AGGGAAAUAGGACCCUCCCCACACCCUUUGCCCUUCUGCCUCA |
Usp5; Isot | mmu-miR-742 | 341 | 348 | A-----------AAUGGGU-CGUAC---------CACCGAAAG | |||||:: |::|| |||||||| | UGGGGCGGGCUCUUACCUGUGUGUGUGUGUGGAUGUGGCUUUA |
Usp5; Isot | mmu-let-7b | 448 | 474 | uuGGUGUG-----UUGGAUGAUGGAGU | |||||| : ||| ||:||||| | ccCCACACCCTTTGCCCTTCTGCCTCA |
Usp5; Isot | mmu-let-7i | 201 | 222 | UGUCGUGUUU-GAUGAUGGAgu | |||| | ::: | |||:||| | ACAGGAGGGGCCAACTGCCTgt |
Usp5; Isot | mmu-miR-125a | 42 | 68 | GU-GUCC-AAUUUCC--CAGAGUCCCU | || | || |:|:|| | || ||||| | CATCTGGCATGAGGGACGGCTGAGGGA |
Usp5; Isot | mmu-miR-125b | 417 | 436 | aGUGUUCAAUCCCAGAGUCCCU | || |:| ||| ||| ||||| | gCAGAGG--AGGCTCTGAGGGA |
Usp5; Isot | mmu-miR-128a | 203 | 231 | UUUUCUCUGG----C---CAAGUGACACu | |::||:|:|| | || ||| ||| | AGGAGGGGCCAACTGCCTGTCCACAGTGg |
Usp5; Isot | mmu-miR-133a | 192 | 214 | UGUCGACCAACUUC-CCCUGGUU | | :| ||| |:| |||:|||| | AGGGATGGGACAGGAGGGGCCAA |
Usp5; Isot | mmu-miR-133a | 214 | 237 | UGUCGACCAACU-UC-CCCUGGUU | || || || | || |||||| | ACTGCCTGTCCACAGTGGGACCTT |
Usp5; Isot | mmu-miR-133b | 193 | 214 | auCGACCAACUUC-CCCUGGUU | | ||| |:| |||:|||| | ggGATGGGACAGGAGGGGCCAA |
Usp5; Isot | mmu-miR-133b | 215 | 237 | auCGACCAACU-UC-CCCUGGUu | || || | || |||||| | ctGCCTGTCCACAGTGGGACCTt |
Usp5; Isot | mmu-miR-134 | 462 | 487 | GGGGAGAC-CAGUU---GGUCAGugu | |||:|||| |||: ||:||| | CCCTTCTGCCTCAGCCTCCGGTCtgt |
Usp5; Isot | mmu-miR-140* | 392 | 414 | aggCACCAA-GAUGGGACACCAu | ||| || || ||:|||||| | taaGTGTTTGCTCCCTTGTGGTg |
Usp5; Isot | mmu-miR-141 | 98 | 121 | gguAGAAAU---GGUCUGUCACaau | |:|||: |||| ||||| | ttgTTTTTGTCCCCAG-CAGTGgga |
Usp5; Isot | mmu-miR-149 | 193 | 215 | CCUCACUUCUGU--GCCUCGGUcu | ||: || :|||| ||:|||| | GGGATG-GGACAGGAGGGGCCAac |
Usp5; Isot | mmu-miR-149 | 159 | 189 | CCUCACU--------UCUGUG-CCUCGGUCU | |||| |: |||| | ||:| |||| | GGAGGGGTACTCATTAGACTCTGGGGACAGA |
Usp5; Isot | mmu-miR-150 | 177 | 203 | GUGA-CCAUGU----UCCCAACCCUcu | | || || ||| |||| ||||| | CTCTGGGGACAGAGCAGGGATGGGAca |
Usp5; Isot | mmu-miR-184 | 461 | 485 | uGGGAA----UAGUCAAGAGGCAGGu | ||||| |||| ||||| :| | gCCCTTCTGCCTCAG-CCTCCGGTCt |
Usp5; Isot | mmu-miR-188 | 15 | 38 | uGGGAGGUGG--UACGUUCCCUac | ||:|||||: | |||:|||| | cCCTTCCACTTGAAGCAGGGGAca |
Usp5; Isot | mmu-miR-193 | 196 | 216 | gACCCUGAAACAUCCGGUcaa | |||||| :||||| | aTGGGACAGGAGGGGCCAact |
Usp5; Isot | mmu-miR-194 | 222 | 243 | AGGUGUACCUCAACGACAAUGu | |||||| |:| :||||:| | TCCACAGTGGGACCTTGTTGCt |
Usp5; Isot | mmu-miR-196b | 198 | 221 | gguUGUUGUCCU---UUGAUGGAu | |||: |||: ||||:||| | gggACAGGAGGGGCCAACTGCCTg |
Usp5; Isot | mmu-miR-199a | 199 | 232 | CUUGUCCAUC-------A--GAC--UUGUGACCC | |:||||| :| | ||| ||| |||| | GGACAGGAGGGGCCAACTGCCTGTCCACAGTGGG |
Usp5; Isot | mmu-miR-199b | 159 | 183 | CUUGUCCAUCAG--AUUUGUGACCC | |:| :|||| || ||:|| ||||| | GGAGGGGTACTCATTAGACTCTGGG |
Usp5; Isot | mmu-miR-200a | 101 | 121 | uguAGCAAUGGUCUGUCACaau | |:|| |||| ||||| | tttTTGTCCCCAG-CAGTGgga |
Usp5; Isot | mmu-miR-207 | 191 | 211 | cUCCCUCCUCUCGGUCCUCUUCG | ||||| |:|| ||||||::|| | cAGGGATGGGA--CAGGAGGGGC |
Usp5; Isot | mmu-miR-211 | 415 | 437 | uCCGUUUCCUAC-UGUUUCCCUU | ||||:|||| | | :|||||| | gGGCAGAGGAGGCTCTGAGGGAA |
Usp5; Isot | mmu-miR-214 | 215 | 242 | GACGGACAG-----ACAC--GGACGACa | ||||||||| || | |:||:|| | CTGCCTGTCCACAGTGGGACCTTGTTGc |
Usp5; Isot | mmu-miR-291a-3p | 146 | 171 | CC-GUGUGUUUCACCU--UCGUGAaa | || || |||||| ||| :|:||| | GGCCAAACAAAGAGGAGGGGTACTca |
Usp5; Isot | mmu-miR-296 | 190 | 214 | uGUCCUAAC----UCCCCCCCGGga | ||||: || ||| |||||| | gCAGGGATGGGACAGGAGGGGCCaa |
Usp5; Isot | mmu-miR-298 | 62 | 86 | cCUUCUUGUCGGGA---GGAGACGg | ||:|:|::| |:| || |||| | tGAGGGATGGACTTCAGCCCCTGCt |
Usp5; Isot | mmu-miR-31 | 335 | 360 | guCGAUACGG---U-CGUAGAACGGa | | |:|| | | ||||||| || | tgGATGTGGCTTTATGCATCTTTCCa |
Usp5; Isot | mmu-miR-320 | 458 | 480 | AAGCGGGAGAGUUGG-GUCGAAaa | ||:||||| || :|| |||| | | TTTGCCCT-TCTGCCTCAGCCTcc |
Usp5; Isot | mmu-miR-324-3p | 98 | 119 | ggucgucguggacccCGUCACC | ||||||| | ttgtttttgtccccaGCAGTGG |
Usp5; Isot | mmu-miR-328 | 192 | 214 | UGCCUUCCC-GUCUCUCCCGGUc | | ||| ||| |||: :|||||| | AGGGATGGGACAGGAGGGGCCAa |
Usp5; Isot | mmu-miR-331 | 344 | 365 | aAGAU-CCUAUCCGGGUCCCCg | |:|| | || :||||||| | cTTTATGCATCTTTCCAGGGGa |
Usp5; Isot | mmu-miR-337 | 44 | 65 | uuuCCGUAGUAUAUCCU--CGACUu | ||||| | :||| ||||| | tctGGCATGA---GGGACGGCTGAg |
Usp5; Isot | mmu-miR-339 | 398 | 424 | acuCGAGG----ACC-UCCUGUC-CCU | ||||| ||| :||:||| ||| | tttGCTCCCTTGTGGTGGGGCAGAGGA |
Usp5; Isot | mmu-miR-340 | 39 | 61 | CCGAUAUUUCAUUGACUCUGCCu | | | || :| | |:||||| | GACCATCTGGCATGAGGGACGGc |
Usp5; Isot | mmu-miR-342 | 302 | 331 | CUGC-CCACGCU--A-AA--GACACACUCu | ||:| || |||: | || ||||||| | | GATGTGGGGCGGGCTCTTACCTGTGTGTGt |
Usp5; Isot | mmu-miR-345 | 41 | 62 | cGU-GACCUGAUCCCCAGUCGu | || |||| |: ||| |:|| | cCATCTGGCATGAGGGACGGCt |
Usp5; Isot | mmu-miR-346 | 161 | 191 | UCUCCGUCCG-----UGAG--CCC-GUCUgu | ||:||:| | |||| ||| |||| | AGGGGTACTCATTAGACTCTGGGGACAGAgc |
Usp5; Isot | mmu-miR-34a | 197 | 220 | uuguUGGUCGAUUCUG-UGACGGu | || :| ::| | |||||| | tgggACAGGAGGGGCCAACTGCCt |
Usp5; Isot | mmu-miR-34b | 199 | 221 | guuagucgauuaaugUGACGGAu | ||||||| | ggacaggaggggccaACTGCCTg |
Usp5; Isot | mmu-miR-34c | 198 | 220 | cguuagucgauugaugUGACGGA | ||||||| | gggacaggaggggccaACTGCCT |
Usp5; Isot | mmu-miR-351 | 412 | 436 | guCCGAGUUUC--CCGAGGAGUCCCU | || ||:|| |||| || ||||| | gtGGGGCAGAGGAGGCT-CTGAGGGA |
Usp5; Isot | mmu-miR-370 | 9 | 34 | uugGUC--CAAGGUGGG-GUCGUCCg | ||| ||||||:: |||||| | cctCAGCCCTTCCACTTGAAGCAGGg |
Usp5; Isot | mmu-miR-376b | 331 | 352 | uuuCACCUACAAGGAGAUACua | |||||||| ||:|||| | tgtGTGGATGTGGCTTTATGca |
Usp5; Isot | mmu-miR-378 | 118 | 142 | ugugUCCUGGACCU-CAG--UCCUC | |||| ||||| ||| ||||| | gggaAGGAGCTGGAGGTCATAGGAG |
Usp5; Isot | mmu-miR-383 | 468 | 489 | uCGGUGUCAGUGG-AAGACUAGA | ||| ||| | || |||| ||| | tGCCTCAGCCTCCGGTCTG-TCT |
Usp5; Isot | mmu-miR-423 | 158 | 192 | gaCUCCCCG-GAGU------------CUGGCUCGa | ||||||: |||| ||| |||| | agGAGGGGTACTCATTAGACTCTGGGGACAGAGCa |
Usp5; Isot | mmu-miR-455-3p | 347 | 379 | ucACAUAUACGGG--------CAC-CUGACGua | || || | :|| | | |||||| | taTGCATCTTTCCAGGGGAGGGAGCGACTGCgc |
Usp5; Isot | mmu-miR-465-3p | 274 | 305 | AGAUGA----AUCUUUCC------GGGACUAg | |||:|| |: :| || ||||||| | TCTGCTTCTCTGTGATGGCCCAACCCCTGATg |
Usp5; Isot | mmu-miR-465-3p | 412 | 434 | agaugaaUCU-UUCCGGGACUag | ||| :||||:|||| | gtggggcAGAGGAGGCTCTGAgg |
Usp5; Isot | mmu-miR-467a | 324 | 345 | CACAUCCACACACAUACAuaua | ||||: ||||||| |||| | GTGTGTGTGTGTGGATGTggct |
Usp5; Isot | mmu-miR-483 | 185 | 210 | UGU-UCUGCCCUCCCC--UCCUCACu | ||| || |||| ||| ||||| | | ACAGAGCAGGGATGGGACAGGAGGGg |
Usp5; Isot | mmu-miR-484 | 359 | 383 | uagCCCUCCC---CUGACUCGGAcu | ||||||| ||||| |||| | cagGGGAGGGAGCGACTGCGCCTcc |
Usp5; Isot | mmu-miR-486 | 177 | 206 | GAG-CCCC-GUCGAGU------CAUGUCCU | ||| |||| ||| || | |||||| | CTCTGGGGACAGAGCAGGGATGGGACAGGA |
Usp5; Isot | mmu-miR-491 | 428 | 454 | gGAGUACCU---UCC--CAAGGGGUGa | || | ||| ||| ||||||| | tCTGAGGGAAATAGGACCCTCCCCACa |
Usp5; Isot | mmu-miR-496 | 140 | 171 | CUCUAACCGGU----------ACAUUAUGAGU | |||| |||||| | ::|||||| | GAGAATGGCCAAACAAAGAGGAGGGGTACTCA |
Usp5; Isot | mmu-miR-497 | 217 | 244 | auguuuGGUGUCAC------ACGACGAc | |||||||| ||:|||| | gcctgtCCACAGTGGGACCTTGTTGCTt |
Usp5; Isot | mmu-miR-501 | 399 | 426 | AAAGUGGG------UCCCUGUUUCCUaa | || | ||| |||:||:|||| | TTGCTCCCTTGTGGTGGGGCAGAGGAgg |
Usp5; Isot | mmu-miR-540 | 31 | 51 | gguCCUAGCUGG-AGACUGga | ||| |||| ||||:| | aggGGACAGACCATCTGGCat |
Usp5; Isot | mmu-miR-542-3p | 470 | 491 | aaAGUCAAUAGUUAGACAGugu | |||| |::|||||| | ccTCAGCCTCCGGTCTGTCttt |
Usp5; Isot | mmu-miR-665 | 66 | 86 | auUCCCUGGAGUCGGAGGACca | | ||||:|||| | |||| | ggATGGACTTCAG-CCCCTGct |
Usp5; Isot | mmu-miR-670 | 47 | 69 | aaGUGGUGUAUG-UGAGUCCCUA | ||: | : || :|| |||||| | ggCATGAGGGACGGCTGAGGGAT |
Usp5; Isot | mmu-miR-672 | 451 | 480 | GUGUGUGUCAUGUG--------GUUGGAGu | ||||| | |:| | ||:|||| | CACACCCTTTGCCCTTCTGCCTCAGCCTCc |
Usp5; Isot | mmu-miR-673 | 177 | 197 | GAGGUUCCUGGUCUCGACACUc | |||:::||| |||||| | || | CTCTGGGGA-CAGAGCAGGGAt |
Usp5; Isot | mmu-miR-674* | 104 | 131 | AACAAGACUC--UAC----CCUCGACac | |||| | || :|| ||||||| | TTGTCCCCAGCAGTGGGAAGGAGCTGga |
Usp5; Isot | mmu-miR-675-5p | 72 | 94 | UGACACCCGGGA-AAGGCGUGGu | ||| | |||| ||:|:||| | ACTTCAGCCCCTGCTCTGTACCc |
Usp5; Isot | mmu-miR-676 | 290 | 313 | uCGAGUUGUUGGA----GUCCUGCC | || |||| ||| ::||:||| | gGCCCAAC-CCCTGATGTGGGGCGG |
Usp5; Isot | mmu-miR-683 | 181 | 208 | CUCCUGUGUCG-----A--AUGUCGUCC | |:||||| ||| | |||| ||| | GGGGACAGAGCAGGGATGGGACAGGAGG |
Usp5; Isot | mmu-miR-683 | 207 | 232 | CUCCUG-UGUCGAA----UGUCGUCC | |:|| | || || | ||||::|| | GGGGCCAACTGCCTGTCCACAGTGGG |
Usp5; Isot | mmu-miR-687 | 345 | 366 | aguaACGACGUAAGGUCCUAUC | ||| | |||||||: || | tttaTGCATCTTTCCAGGGGAG |
Usp5; Isot | mmu-miR-689 | 164 | 187 | CC-UGGGGCGGCU--CGCCCCUGc | || ||:| : || :|||||| | GGTACTCATTAGACTCTGGGGACa |
Usp5; Isot | mmu-miR-691 | 480 | 506 | aaaAGACGGAG-----AGAAGUCCUUa | ||||:||: || || |||| | cggTCTGTCTTTATGGTCCTCTGGAAa |
Usp5; Isot | mmu-miR-693-5p | 326 | 346 | cuuuugaAAGCCUACACCGAc | | :|||||||||| | gtgtgtgTGTGGATGTGGCTt |
Usp5; Isot | mmu-miR-697 | 176 | 200 | aGAGG----UGUCCUGGUCCUACaa | |||: |||| :| :||||| | aCTCTGGGGACAGAGCAGGGATGgg |
Usp5; Isot | mmu-miR-699 | 197 | 220 | gCUCGGUCCAGC---G-UGACGGA | |:| |||| | | ||||||| | tGGGACAGGAGGGGCCAACTGCCT |
Usp5; Isot | mmu-miR-700 | 309 | 328 | CCACCUGAGCCAAGGGCGCAC | || ||:||| | ||:|:||| | GGCGGGCTC-TTACCTGTGTG |
Usp5; Isot | mmu-miR-709 | 462 | 480 | aGGAGGACGGAGACGGAGG | |||:||||||| |||||| | cCCTTCTGCCTCAGCCTCC |
Usp5; Isot | mmu-miR-712 | 33 | 58 | CCAUGGC-GG--GCCC--ACUUCCUc | || || | || | || |||:||| | GGGACAGACCATCTGGCATGAGGGAc |
Usp5; Isot | mmu-miR-712* | 294 | 320 | GUUGUGGGC----CCCC-ACUGAGcgu | |||| ||:| |||| |:||| | CAACCCCTGATGTGGGGCGGGCTCtta |
Usp5; Isot | mmu-miR-714 | 370 | 391 | CGCUGGC-UGGCCGGGAGcagc | |||||:| :|| ||||| | GCGACTGCGCCTCCCCTCccct |
Usp5; Isot | mmu-miR-715 | 319 | 339 | gUGCGCCCCCACACGUGCCUc | || :| | |||||:::||| | tACCTGTGTGTGTGTGTGGAt |
Usp5; Isot | mmu-miR-742 | 317 | 348 | aAAUGGGU-------CGUAC---CACCGAAAg | |||||:: |::|| |||||||| | cTTACCTGTGTGTGTGTGTGGATGTGGCTTTa |
Usp5; Isot | mmu-miR-743 | 466 | 491 | AGAU-GAGUCGAA--CC--ACAGAAA | |||: |||||| | || ||||||| | TCTGCCTCAGCCTCCGGTCTGTCTTT |
Usp5; Isot | mmu-miR-744 | 60 | 86 | CGA----CAAUCGGGA-UCGGGG-CGu | ||| | |:| |:| |||||| || | GCTGAGGGATGGACTTCAGCCCCTGCt |
Usp5; Isot | mmu-miR-761 | 218 | 242 | acACA---GUCAAAGUGGGACGACG | ||| |||| |||:||:||| | ccTGTCCACAGTGGGACCTTGTTGC |
Usp5; Isot | mmu-miR-763 | 93 | 117 | cGGUGACCAAGAA---GGGUCGACc | |: :| |||:|| |||||| | | cCTTTTTGTTTTTGTCCCCAGCAGt |
Usp5; Isot | mmu-miR-764-3p | 463 | 481 | ugucaACGGUGAUACCGGAGGa | |||| | | |||||| | ccttcTGCCTC-A--GCCTCCg |
Usp5; Isot | mmu-miR-764-3p | 479 | 503 | uGUCA-ACGGUGAUACC-GGAGGA- | |:|| ||:| :||||| ||||: | cCGGTCTGTCTTTATGGTCCTCTGG |
Usp5; Isot | mmu-miR-770-3p | 274 | 297 | gGUCGAGGUG-CAGU-CCGGGUgc | | |||:| | || | |||||| | tCTGCTTCTCTGTGATGGCCCAac |
Usp5; Isot | mmu-miR-804 | 357 | 380 | AGGUCCACU-CCUUGUUGA-GUGu | |||||| || |||:|:||| |:| | TCCAGGGGAGGGAGCGACTGCGCc |
Usp5; Isot | mmu-miR-96 | 189 | 215 | UCGUUUUUACACGAU----CACGGUUu | ||||:::||| | | | ||||| | AGCAGGGATGGGACAGGAGGGGCCAAc |