SNP - dbSNP |
dbSNP | Type | Alleles | Het | Se(het) | Fxn-class | Gene Name | Assembly | Chr-pos | Sequence | Entrez Gene |
rs27362032 | snp | C/T | 0.387812 | 0.208586 | upstream-variant-2KB | Rag1 | Mm_Celera | 2:101651197 | AGGTGACCGAGCCAC[C/T]GTCGCTTGCCCTGGG | 19373 |
rs27362033 | snp | A/G | 0.277778 | 0.248452 | upstream-variant-2KB | Rag1 | Mm_Celera | 2:101650365 | TAGATGTTGAAGATC[A/G]GTTGGAATTATGAAG | 19373 |
rs27362034 | snp | C/T | 0.46875 | 0.121031 | upstream-variant-2KB | Rag1 | Mm_Celera | 2:101650343 | TAGCCCATGGTTACC[C/T]AGCTGATAGATGTTG | 19373 |
rs27362035 | snp | A/T | 0.124444 | 0.216185 | upstream-variant-2KB | Rag1 | Mm_Celera | 2:101649928 | GCTTAGAGAAAAAAA[A/T]TTTGGAATGGTACCT | 19373 |
rs27362036 | snp | G/T | 0.32 | 0.24 | upstream-variant-2KB | Rag1 | Mm_Celera | 2:101649775 | GCCTACGGTGGAAAT[G/T]ATATCGTCACTCTAA | 19373 |
rs27362037 | snp | C/T | 0.132653 | 0.220748 | upstream-variant-2KB | Rag1 | Mm_Celera | 2:101649576 | TATCAGCTCTCACTG[C/T]CCTTCCCACTCTCCC | 19373 |
rs27362038 | snp | C/T | 0.124444 | 0.216185 | utr-variant-5-prime | Rag1 | Mm_Celera | 2:101649471 | ATGTCTGCAGCTTGG[C/T]TGTTAACACTCGATG | 19373 |
rs27362039 | snp | A/G | 0.124444 | 0.216185 | utr-variant-5-prime | Rag1 | Mm_Celera | 2:101649454 | CCGGCCAGAGTGCTA[A/G]AATGTCTGCAGCTTG | 19373 |
rs27362040 | snp | A/G | 0.142012 | 0.225474 | utr-variant-5-prime | Rag1 | Mm_Celera | 2:101649441 | CTCCACAGGCCTCCC[A/G]GCCAGAGTGCTAGAA | 19373 |
rs27362041 | snp | A/G | 0.391111 | 0.206368 | intron-variant | Rag1 | Mm_Celera | 2:101649200 | CATTCATTTATATCC[A/G]CCCCGGTGTGTTCCA | 19373 |
rs27362042 | snp | C/T | 0.231111 | 0.249285 | intron-variant | Rag1 | Mm_Celera | 2:101649134 | TGAGCTAACCGTGTG[C/T]TCCTCTGTCTCCCCT | 19373 |
rs27362043 | snp | C/T | 0.444444 | 0.157135 | intron-variant | Rag1 | Mm_Celera | 2:101649104 | ATTCTTTGTTCCTGA[C/T]TATCTTCTCTTGCCT | 19373 |
rs27362044 | snp | C/T | 0.32 | 0.24 | intron-variant | Rag1 | Mm_Celera | 2:101649012 | GTGGTGTACAGGTCA[C/T]GTTTTCTGAAACACC | 19373 |
rs27362045 | snp | C/T | 0.124444 | 0.216185 | intron-variant | Rag1 | Mm_Celera | 2:101648831 | CAAGAACATAACCTC[C/T]GGGTAGGCTCTCCTC | 19373 |
rs27362046 | snp | A/G | 0.32 | 0.24 | intron-variant | Rag1 | Mm_Celera | 2:101648633 | TGACCCCTCTTTGAC[A/G]CATCTGACCTACCCC | 19373 |
rs27362047 | snp | C/G | 0.142012 | 0.225474 | intron-variant | Rag1 | Mm_Celera | 2:101648405 | TGCACTCCCCTGATT[C/G]ACTCACCCTCTCCTG | 19373 |
rs27362048 | snp | A/G | 0.408163 | 0.193609 | intron-variant | Rag1 | Mm_Celera | 2:101648349 | GGGTGTCTAGAAAGC[A/G]CAGCAGCAGCTCATT | 19373 |
rs27362049 | snp | A/G | 0.32 | 0.24 | intron-variant | Rag1 | Mm_Celera | 2:101648336 | CATCAGTAACCTTGG[A/G]TGTCTAGAAAGCACA | 19373 |
rs27362050 | snp | A/G | 0.32 | 0.24 | intron-variant | Rag1 | Mm_Celera | 2:101648294 | ATATGGACAAGCGAG[A/G]CAAGACTGTGGCTTA | 19373 |
rs27362051 | snp | A/G | 0.444444 | 0.157135 | intron-variant | Rag1 | Mm_Celera | 2:101648279 | AACCAGCCTGGGGTG[A/G]TATGGACAAGCGAGA | 19373 |
rs27362052 | snp | G/T | 0.46281 | 0.131194 | intron-variant | Rag1 | Mm_Celera | 2:101648191 | TCCCAGTCAGCAGCA[G/T]CACCTTGGAATTGTT | 19373 |
rs27362053 | snp | A/G | 0.231111 | 0.249285 | intron-variant | Rag1 | Mm_Celera | 2:101648152 | GAGTCTAAAGGCTGA[A/G]GGTCTGATGCTGGCT | 19373 |
rs27362054 | snp | C/G | 0.444444 | 0.157135 | intron-variant | Rag1 | Mm_Celera | 2:101648119 | CTTGTAGCAAAAGGT[C/G]TGAGAGTAGACACCT | 19373 |
rs27362055 | snp | A/G | 0.408163 | 0.193609 | intron-variant, upstream-variant-2KB | Rag1 | Mm_Celera | 2:101647502 | AGAATACAGATTATC[A/G]CCAAAGGGGCATTAT | 19373 |
rs27362056 | snp | C/T | 0.132653 | 0.220748 | intron-variant, upstream-variant-2KB | Rag1 | Mm_Celera | 2:101647310 | AAATGAGCACAGTGA[C/T]ACTTTAATAAAGTCT | 19373 |
rs27362057 | snp | A/G | 0.265928 | 0.249492 | intron-variant, upstream-variant-2KB | Rag1 | Mm_Celera | 2:101647046 | ATCCAAACTTTTGAA[A/G]CAGAATGGAGGTGGG | 19373 |
rs27362058 | snp | A/G | 0.260355 | 0.249785 | intron-variant, upstream-variant-2KB | Rag1 | Mm_Celera | 2:101646990 | CCAGGCAAACCAACC[A/G]TATTTATTAGGTTGT | 19373 |
rs27362059 | snp | C/G | 0.231111 | 0.249285 | intron-variant, upstream-variant-2KB | Rag1 | Mm_Celera | 2:101646898 | CCTGACTGCCTCAAG[C/G]CTGAAACATCATAAC | 19373 |
rs27362060 | snp | G/T | 0.32 | 0.24 | intron-variant, upstream-variant-2KB | Rag1 | Mm_Celera | 2:101646890 | CAACTTCCCCTGACT[G/T]CCTCAAGCCTGAAAC | 19373 |
rs27362061 | snp | A/T | 0.231111 | 0.249285 | intron-variant, upstream-variant-2KB | Rag1 | Mm_Celera | 2:101646858 | CATTAAATATCGACC[A/T]TTCACAGTCAGCAAG | 19373 |
rs27362062 | snp | A/C | 0.124444 | 0.216185 | intron-variant, upstream-variant-2KB | Rag1 | Mm_Celera | 2:101646831 | GGCTTGAACCAAATG[A/C]CACTCTCACCACATT | 19373 |
rs27362063 | snp | G/T | 0.231111 | 0.249285 | intron-variant, upstream-variant-2KB | Rag1 | Mm_Celera | 2:101646509 | TCTGCTAGCAACATT[G/T]CTTTTGAATTCTTCC | 19373 |
rs27362064 | snp | A/G | 0.142012 | 0.225474 | intron-variant, upstream-variant-2KB | Rag1 | Mm_Celera | 2:101646479 | TCGTGAAGGAGCTAA[A/G]GAATAGTCCTGGATT | 19373 |
rs27362065 | snp | A/G | 0.231111 | 0.249285 | intron-variant, upstream-variant-2KB | Rag1 | Mm_Celera | 2:101646451 | AGGAGTGGGACTTTG[A/G]GCATCAGGGAAATCG | 19373 |
rs27362066 | snp | C/T | 0.231111 | 0.249285 | intron-variant, upstream-variant-2KB | Rag1 | Mm_Celera | 2:101646408 | ATGTAGTCAGGAACA[C/T]GATGCCCCAGATGAA | 19373 |
rs27362067 | snp | A/G | 0.35503 | 0.226867 | intron-variant, upstream-variant-2KB | Rag1 | Mm_Celera | 2:101645710 | GTTAGTAATGATAAG[A/G]GATACGAGGAATAAT | 19373 |
rs27362068 | snp | A/G | 0.231111 | 0.249285 | intron-variant, upstream-variant-2KB | Rag1 | Mm_Celera | 2:101645651 | ACAAAACTCACACAG[A/G]TCATCCTGAAAGTCA | 19373 |
rs27362069 | snp | A/G | 0.391111 | 0.206368 | intron-variant | Rag1 | Mm_Celera | 2:101645327 | TTAAAGCATTCTTCC[A/G]GGAGATTGGTTGTTT | 19373 |
rs27362070 | snp | C/T | 0.495868 | 0.0452663 | intron-variant | Rag1 | Mm_Celera | 2:101645261 | GAAAAGTAATATTTC[C/T]CACATTGTATTAGCC | 19373 |
rs27362071 | snp | C/T | 0.231111 | 0.249285 | intron-variant | Rag1 | Mm_Celera | 2:101645116 | AATTTAATTCCCTTT[C/T]CACAAAAACCTTGAC | 19373 |
rs27362072 | snp | C/T | 0.444444 | 0.157135 | intron-variant | Rag1 | Mm_Celera | 2:101645027 | ATACAGCCAAAATGG[C/T]CAATCCTTTCCTGAC | 19373 |
rs27362073 | snp | C/T | 0.124444 | 0.216185 | intron-variant | Rag1 | Mm_Celera | 2:101644903 | ATCAATAGCGTATCG[C/T]AATATTTTGGAAATA | 19373 |
rs27362074 | snp | C/T | 0.444444 | 0.157135 | synonymous-codon | Rag1 | Mm_Celera | 2:101644739 | TTTGATTTGTGGGTG[C/T]TGAATTTCATCGGGT | 19373 |
rs27362075 | snp | A/G | 0.444444 | 0.157135 | synonymous-codon | Rag1 | Mm_Celera | 2:101644568 | TTTCAGTGCTCGTTG[A/G]GTCAGAATTGAGTTC | 19373 |
rs27362076 | snp | A/G | 0.444444 | 0.157135 | synonymous-codon | Rag1 | Mm_Celera | 2:101644382 | CTTCTTTCGGAAAAG[A/G]CTTTGGGTTTTAGCG | 19373 |
rs27362077 | snp | A/G | 0.231111 | 0.249285 | synonymous-codon | Rag1 | Mm_Celera | 2:101644331 | GATCCGGAAAATCCT[A/G]GCAATGAGGTCTGGC | 19373 |
rs27362078 | snp | C/T | 0.391111 | 0.206368 | synonymous-codon | Rag1 | Mm_Celera | 2:101644283 | ATGGCAGAATTCCGT[C/T]GGGTGGATGGAGTCA | 19373 |
rs27362079 | snp | A/C | 0.391111 | 0.206368 | missense | Rag1 | Mm_Celera | 2:101644231 | AGACCTGACTGTGGG[A/C]ACTGCTGAACTTTCT | 19373 |
rs27362080 | snp | G/T | 0.444444 | 0.157135 | missense | Rag1 | Mm_Celera | 2:101644202 | CCACTCCACGGTCAC[G/T]TTCCTTGGGAAGTAG | 19373 |
rs27362081 | snp | A/G | 0.444444 | 0.157135 | synonymous-codon | Rag1 | Mm_Celera | 2:101644154 | TCCCCGATGGGCAGT[A/G]AAACAGATGTCACAG | 19373 |
rs27362082 | snp | C/T | 0.391111 | 0.206368 | synonymous-codon | Rag1 | Mm_Celera | 2:101644127 | ATTGGGCTGATGTCT[C/T]TTCCTCTTGAGTCCC | 19373 |
rs27362083 | snp | A/G | 0.231111 | 0.249285 | synonymous-codon | Rag1 | Mm_Celera | 2:101643965 | TGCTGGGAAGTCCAC[A/G]GCAAGAAGCTTGGTA | 19373 |
rs27362084 | snp | A/G | 0.444444 | 0.157135 | synonymous-codon | Rag1 | Mm_Celera | 2:101643875 | GATCCTACAGAATAG[A/G]TGCTTGCAGCTGGTC | 19373 |
rs27362085 | snp | A/G | 0.444444 | 0.157135 | synonymous-codon | Rag1 | Mm_Celera | 2:101643845 | GCCCATGACTTTGAG[A/G]CATCTGAGAATGCAG | 19373 |
rs27362086 | snp | C/T | 0.444444 | 0.157135 | missense | Rag1 | Mm_Celera | 2:101643759 | AGAGAATTCAAGATG[C/T]TCAGAAAGGACTTCA | 19373 |
rs27362087 | snp | A/C | 0.231111 | 0.249285 | missense | Rag1 | Mm_Celera | 2:101643672 | TTAGATTCTTTGTGG[A/C]TTGACACATGGTGGT | 19373 |
rs27362088 | snp | C/T | 0.444444 | 0.157135 | synonymous-codon | Rag1 | Mm_Celera | 2:101643497 | TGCCAGGAGAAACAA[C/T]GTCAAGCAGACAGCC | 19373 |
rs27362089 | snp | A/G | 0.277778 | 0.248452 | synonymous-codon | Rag1 | Mm_Celera | 2:101643491 | CCTCAGTGCCAGGAG[A/G]AACAATGTCAAGCAG | 19373 |
rs27362090 | snp | C/T | 0.444444 | 0.157135 | synonymous-codon | Rag1 | Mm_Celera | 2:101643446 | CATGATGGCCTCTAA[C/T]TCATCAGCTTGCCTG | 19373 |
rs27362091 | snp | G/T | 0.408163 | 0.193609 | synonymous-codon | Rag1 | Mm_Celera | 2:101643424 | GAAGCCCGGAGCCCC[G/T]GCCTTGCATGATGGC | 19373 |
rs27362092 | snp | C/T | 0.277778 | 0.248452 | synonymous-codon | Rag1 | Mm_Celera | 2:101643242 | CAGTGGGGGCTGCCA[C/T]TCAAAGGGATGGTAG | 19373 |
rs27362093 | snp | C/T | 0.32 | 0.24 | synonymous-codon | Rag1 | Mm_Celera | 2:101642921 | CGTAATTCTCATGAC[C/T]GTGAAAGAGAAACGA | 19373 |
rs27362094 | snp | C/T | 0.444444 | 0.157135 | synonymous-codon | Rag1 | Mm_Celera | 2:101642891 | CACCTTCACGTTCTG[C/T]GAACCATGCTCTATC | 19373 |
rs27362095 | snp | C/T | 0.277778 | 0.248452 | synonymous-codon | Rag1 | Mm_Celera | 2:101642657 | CAAGCCTTCTACTTC[C/T]CGGACAAGTTTTTCA | 19373 |
rs27362096 | snp | C/T | 0.444444 | 0.157135 | missense | Rag1 | Mm_Celera | 2:101642602 | CTTCCAAACGGGTGG[C/T]GTCACAGAGTGTACA | 19373 |
rs27362097 | snp | A/G | 0.387812 | 0.208586 | synonymous-codon | Rag1 | Mm_Celera | 2:101642498 | CTCTTCCACGGACTC[A/G]TGATACGGATTGGAC | 19373 |
rs27362098 | snp | A/T | 0.132653 | 0.220748 | missense | Rag1 | Mm_Celera | 2:101642382 | AGCTGGAAAATCTTA[A/T]AGAATTCAGCTGCAT | 19373 |
rs27362099 | snp | C/G | 0.231111 | 0.249285 | synonymous-codon | Rag1 | Mm_Celera | 2:101642300 | GAGATGTTTGTCCAG[C/G]GTGGCCTGCCATCTC | 19373 |
rs27362100 | snp | A/G | 0.432133 | 0.171253 | synonymous-codon | Rag1 | Mm_Celera | 2:101642090 | ACAGAGGGACTCTGG[A/G]CACTCTTTAGCGGGA | 19373 |
rs27362101 | snp | G/T | 0.33241 | 0.236027 | synonymous-codon | Rag1 | Mm_Celera | 2:101641931 | TCCCTCACTTGCCCA[G/T]GCCCCGATAGAGCCA | 19373 |
rs27362102 | snp | A/G | 0.132653 | 0.220748 | synonymous-codon | Rag1 | Mm_Celera | 2:101641775 | AGAGCTTTTTAACGC[A/G]TTATGAGCATTCATA | 19373 |
rs27362103 | snp | C/T | 0.124444 | 0.216185 | synonymous-codon | Rag1 | Mm_Celera | 2:101641772 | CCCAGAGCTTTTTAA[C/T]GCGTTATGAGCATTC | 19373 |
rs27362104 | snp | A/C | 0.32 | 0.24 | utr-variant-3-prime | Rag1 | Mm_Celera | 2:101641551 | GCCTCTCACTCCAAC[A/C]TGTCACCCCTTGGGT | 19373 |
rs27362105 | snp | A/G | 0.231111 | 0.249285 | utr-variant-3-prime | Rag1 | Mm_Celera | 2:101641508 | ATCTTGTCAACTATC[A/G]ATCCCTGACCAGGTG | 19373 |
rs27362106 | snp | C/T | 0.444444 | 0.157135 | utr-variant-3-prime | Rag1 | Mm_Celera | 2:101641322 | CCTAGCATGCTTGGC[C/T]GTCCTTTGACAGCCT | 19373 |
rs27362107 | snp | A/G | 0.444444 | 0.157135 | utr-variant-3-prime | Rag1 | Mm_Celera | 2:101640955 | AAATTTATGACACCA[A/G]ATGACCTCCTAGACA | 19373 |
rs27362108 | snp | C/T | 0.444444 | 0.157135 | utr-variant-3-prime | Rag1 | Mm_Celera | 2:101640885 | CAAGCATGACTTTAT[C/T]ATACTTAATAGGTAG | 19373 |
rs27362109 | snp | C/T | 0.277778 | 0.248452 | utr-variant-3-prime | Rag1 | Mm_Celera | 2:101640762 | GTAAGAAAATGTGGA[C/T]TTTAAAAATCTGTAA | 19373 |
rs27362110 | snp | G/T | 0.35503 | 0.226867 | utr-variant-3-prime | Rag1 | Mm_Celera | 2:101640741 | TATTAAATCTGCTTT[G/T]GGGCAGTAAGAAAAT | 19373 |
rs27362111 | snp | A/G | 0.444444 | 0.157135 | utr-variant-3-prime | Rag1 | Mm_Celera | 2:101640713 | GAAAATCTGACTGAC[A/G]TTTTTAGCAAGGTAT | 19373 |
rs27362112 | snp | A/G | 0.444444 | 0.157135 | utr-variant-3-prime | Rag1 | Mm_Celera | 2:101640662 | AGAGGAAGACTTTAG[A/G]AAGCCTGGACTTATT | 19373 |
rs27362113 | snp | G/T | 0.277778 | 0.248452 | utr-variant-3-prime | Rag1 | Mm_Celera | 2:101640623 | CTCAACTGATCATAA[G/T]CAAAAGAATAACACA | 19373 |
rs27362114 | snp | A/G | 0.497778 | 0.0332592 | utr-variant-3-prime | Rag1 | Mm_Celera | 2:101640399 | AACCCAGAATCAAGA[A/G]ACTAAGGCTTGGGTT | 19373 |
rs27362115 | snp | A/T | 0.459184 | 0.136902 | utr-variant-3-prime | Rag1 | Mm_Celera | 2:101640326 | AACTGTAGTGTTTAG[A/T]GTAGATCCCAATTAT | 19373 |
rs27362116 | snp | A/G/T | 0.444444 | 0.157135 | utr-variant-3-prime | Rag1 | GRCm38.p3 | 2:101640233 | TTCCTTGGAGGTTTG[A/G/T]CCCAATTTTATTCTA | 19373 |
rs27362117 | snp | A/T | 0.231111 | 0.249285 | utr-variant-3-prime | Rag1 | Mm_Celera | 2:101640190 | TGAATAGTTTCCAAA[A/T]AACTGCAGCCACTAG | 19373 |
rs27362118 | snp | A/G | 0.255 | 0.24995 | utr-variant-3-prime | Rag1 | Mm_Celera | 2:101639976 | GCCATTTAGGATAAT[A/G]TCATTTTTGCACACT | 19373 |
rs27362119 | snp | C/T | 0.432133 | 0.171253 | utr-variant-3-prime | Rag1 | Mm_Celera | 2:101639902 | AGAAAGCAAAGAAAA[C/T]GGCTGCATCTTTCAA | 19373 |
rs27362120 | snp | A/G | 0.265928 | 0.249492 | utr-variant-3-prime | Rag1 | Mm_Celera | 2:101639863 | TGACAACTAAATTAC[A/G]AATGTCTTCGATGTG | 19373 |
rs27362121 | snp | A/G | 0.336735 | 0.234472 | utr-variant-3-prime | Rag1 | Mm_Celera | 2:101639613 | GGGGAATTTAATATC[A/G]GGCAGTATTTACAGT | 19373 |
rs27362122 | snp | C/T | 0.260355 | 0.249785 | utr-variant-3-prime | Rag1 | Mm_Celera | 2:101639612 | AGGGGAATTTAATAT[C/T]GGGCAGTATTTACAG | 19373 |
rs27362123 | snp | C/T | 0.444444 | 0.157135 | utr-variant-3-prime | Rag1 | Mm_Celera | 2:101639489 | TCCTGTGGCCAGGTG[C/T]TCCAGAGGTTTATCA | 19373 |
rs27362124 | snp | A/C | 0.244898 | 0.249948 | utr-variant-3-prime | Rag1 | Mm_Celera | 2:101639454 | ACAAATAGCCATAGG[A/C]GATAGTCTACATAAT | 19373 |
rs27362125 | snp | C/G | 0.231111 | 0.249285 | utr-variant-3-prime | Rag1 | Mm_Celera | 2:101639054 | CAAAATTAAATTCCT[C/G]TCCACCTGAGAGAGA | 19373 |
rs27362126 | snp | A/T | 0.132653 | 0.220748 | utr-variant-3-prime | Rag1 | Mm_Celera | 2:101638571 | CCAAAACAAATTAAT[A/T]CCGGGTTTTGCTTAC | 19373 |
rs27362127 | snp | A/G | 0.277778 | 0.248452 | downstream-variant-500B | Rag1 | Mm_Celera | 2:101638224 | ATATGAGATGATATA[A/G]CACCAATATAAATCA | 19373 |
rs27362128 | snp | A/G | 0.231111 | 0.249285 | downstream-variant-500B | Rag1 | Mm_Celera | 2:101638142 | CTAAGTATCACAGTC[A/G]CCAAGTTCATTTTTA | 19373 |
rs29539464 | snp | A/G | 0.444444 | 0.157135 | utr-variant-3-prime | Rag1 | Mm_Celera | 2:101638258 | CGCCTGTTATTTTCA[A/G]ATCTTAAACTTTTAT | 19373 |
rs29774548 | snp | A/G | 0.375 | 0.216506 | intron-variant | Rag1 | Mm_Celera | 2:101649327 | TCTCACCCCTCCTTC[A/G]GTGCCTGTAAGGAAA | 19373 |
rs29907433 | snp | C/T | 0.444444 | 0.157135 | upstream-variant-2KB | Rag1 | Mm_Celera | 2:101650342 | TTAGCCCATGGTTAC[C/T]TAGCTGATAGATGTT | 19373 |