iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114270

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000763

Gene Name

SORBI_004G252800

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb04g029220	Sb04g029220.1	Sb04g029220.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	7.30e-07	30.4	226	267

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+C++     ++  + lpC H++h  C+  w         + +CPlCr
   Q: 226  CAVCKDGVeagER-ARRLPCAHLYHDGCILPW------LAIRNTCPLCR 267
           ******9966555.999***************......**********8 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MANDSLAHHL LLPLAGGCWS DVDEEEEEPG NVSFPSFWPP FPALSSDSDS DAASFVRPRM 60
DRPRETAASS FFGLGFHDHD GDDDEWAPPD EDGELALPLC WDCLQLEDHD DDHRRWDVGV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCCAACG ATTCCCTCGC CCACCACCTG CTGCTCCCTC TCGCCGGCGG CTGCTGGTCC 60
GACGTTGATG AGGAGGAGGA GGAGCCGGGC AACGTCTCCT TCCCCTCATT CTGGCCGCCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0005634--C:nucleus
GO:0008270--F:zinc ion binding
GO:0009909--P:regulation of flower development
GO:0009416--P:response to light stimulus

KEGG

sbi:SORBI_04g029180

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002504	Amborella trichopoda	50.51	2.00e-27	116.00
IUUC-Aly-005543	Arabidopsis lyrata	38.04	2.00e-25	109.00
IUUC-Ath-006960	Arabidopsis thaliana	47.32	4.00e-25	108.00
IUUC-Bta-012728	Bos taurus	50.52	2.00e-20	90.90
IUUC-Bdi-014405	Brachypodium distachyon	68.30	1.00e-55	208.00
IUUC-Cja-019559	Callithrix jacchus	42.74	6.00e-20	89.00
IUUC-Cfa-020880	Canis familiaris	44.64	4.00e-20	89.70
IUUC-Cpo-022238	Cavia porcellus	49.48	2.00e-20	90.90
IUUC-Csa-023787	Chlorocebus sabaeus	48.45	9.00e-20	88.60
IUUC-Dno-029183	Dasypus novemcinctus	45.28	7.00e-19	85.50
IUUC-Dor-030499	Dipodomys ordii	47.57	3.00e-20	89.70
IUUC-Ete-032501	Echinops telfairi	48.45	2.00e-19	87.00
IUUC-Eca-033768	Equus caballus	48.45	1.00e-19	87.80
IUUC-Eeu-035209	Erinaceus europaeus	48.45	6.00e-20	88.60
IUUC-Fca-036074	Felis catus	42.74	2.00e-18	84.00
IUUC-Gmo-038882	Gadus morhua	46.67	1.00e-18	84.70
IUUC-Ggo-044890	Gorilla gorilla	48.45	6.00e-20	89.00
IUUC-Hsa-045980	Homo sapiens	41.88	3.00e-19	86.70
IUUC-Itr-048618	Ictidomys tridecemlineatus	44.64	5.00e-22	95.90
IUUC-Lch-049758	Latimeria chalumnae	47.66	5.00e-25	105.00
IUUC-Lpe-051346	Leersia perrieri	67.23	1.00e-53	202.00
IUUC-Loc-052244	Lepisosteus oculatus	45.45	8.00e-22	95.50
IUUC-Laf-054225	Loxodonta africana	48.00	3.00e-20	90.10
IUUC-Mmr-061195	Microcebus murinus	49.48	1.00e-20	91.30
IUUC-Mac-065058	Musa acuminata	43.83	2.00e-41	162.00
IUUC-Mpu-066689	Mustela putorius furo	40.83	2.00e-19	87.80
IUUC-Mlu-067441	Myotis lucifugus	44.83	2.00e-19	87.00
IUUC-Nle-069091	Nomascus leucogenys	36.99	6.00e-19	85.90
IUUC-Opr-070653	Ochotona princeps	44.64	7.00e-20	88.60
IUUC-Oan-073246	Ornithorhynchus anatinus	47.32	6.00e-23	99.00
IUUC-Ocu-074317	Oryctolagus cuniculus	43.90	1.00e-19	88.20
IUUC-Obr-076110	Oryza brachyantha	69.17	8.00e-62	229.00
IUUC-Ogl-077246	Oryza glaberrima	69.11	1.00e-71	261.00
IUUC-Ogu-078820	Oryza glumaepatula	69.11	2.00e-71	261.00
IUUC-Oin-079334	Oryza indica	69.11	1.00e-71	261.00
IUUC-Ome-081782	Oryza meridionalis	65.96	2.00e-74	271.00
IUUC-Oni-082668	Oryza nivara	69.11	1.00e-71	261.00
IUUC-Opu-083598	Oryza punctata	69.13	1.00e-65	242.00
IUUC-Oru-084857	Oryza rufipogon	69.11	1.00e-71	261.00
IUUC-Osa-085477	Oryza sativa	69.11	1.00e-71	261.00
IUUC-Oga-088998	Otolemur garnettii	50.65	7.00e-18	82.40
IUUC-Oar-089622	Ovis aries	50.52	6.00e-22	95.90
IUUC-Ptr-091537	Pan troglodytes	48.45	6.00e-20	89.00
IUUC-Pan-091865	Papio anubis	48.45	1.00e-19	88.20
IUUC-Pab-097986	Pongo abelii	48.45	6.00e-20	89.00
IUUC-Pca-100492	Procavia capensis	43.44	1.00e-20	91.70
IUUC-Ppe-101286	Prunus persica	43.64	3.00e-28	118.00
IUUC-Pva-102641	Pteropus vampyrus	48.45	5.00e-20	89.40
IUUC-Rno-105300	Rattus norvegicus	48.04	1.00e-20	91.30
IUUC-Sit-110400	Setaria italica	77.68	3.00e-97	347.00
IUUC-Sly-111587	Solanum lycopersicum	54.29	5.00e-27	114.00
IUUC-Stu-112460	Solanum tuberosum	56.19	2.00e-28	119.00
IUUC-Ssc-115694	Sus scrofa	49.48	2.00e-20	90.50
IUUC-Tca-121330	Theobroma cacao	39.82	3.00e-32	132.00
IUUC-Tae-123877	Triticum aestivum	65.38	3.00e-55	207.00
IUUC-Ttr-129081	Tursiops truncatus	49.48	8.00e-21	92.00
IUUC-Vpa-130305	Vicugna pacos	47.42	3.00e-19	86.30
IUUC-Vvi-131520	Vitis vinifera	48.00	1.00e-33	136.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence