SNP - dbSNP |
dbSNP | Type | Alleles | Het | Se(het) | Fxn-class | Gene Name | Assembly | Chr-pos | Sequence | Entrez Gene |
rs10761 | snp | A/G | 0 | 0 | utr-variant-3-prime, intron-variant | MDM2, CPM | GRCh38.p7 | 12:68843960 | ATTATTGGAGTTCAT[A/G]ATACTGAAGCTAGAA | 4193 |
rs11784 | snp | A/G | 0 | 0 | utr-variant-3-prime, intron-variant | MDM2, CPM | GRCh38.p7 | 12:68843942 | TTTGGAGGTCCTCAA[A/G]GCATTATTGGAGTTC | 4193 |
rs710633 | snp | C/T | 0.0246227 | 0.10819 | utr-variant-3-prime | MDM2 | GRCh38.p7 | 12:68839854 | ATTTCCCCTAGTTGA[C/T]CTGTCTATAAGAGAA | 4193 |
rs769412 | snp | A/G | 0.108172 | 0.205876 | synonymous-codon | MDM2 | GRCh38.p7 | 12:68839435 | CTCAACACAAGCTGA[A/G]GAGGGCTTTGATGTT | 4193 |
rs777472 | snp | A/G | 0 | 0 | intron-variant | MDM2 | GRCh38.p7 | 12:68833112 | tggagacagagtctc[A/G]ctctgtcacccaggc | 4193 |
rs777473 | snp | C/T | 0 | 0 | intron-variant | MDM2 | GRCh38.p7 | 12:68833029 | acgccattctcctgc[C/T]tcagcctccccagtg | 4193 |
rs937282 | snp | C/G | 0.499982 | 0.00299515 | upstream-variant-2KB | MDM2 | GRCh38.p7 | 12:68808017 | CCCCACCCCGCCTCA[C/G]AGCCCGCCGCGCCCG | 4193 |
rs937283 | snp | A/G | 0.422787 | 0.180679 | upstream-variant-2KB, utr-variant-5-prime | MDM2 | GRCh38.p7 | 12:68808384 | CCGGAGAGTGGAATG[A/G]TCCCCGAGGCCCAGG | 4193 |
rs1047283 | snp | C/T | 0.0217236 | 0.101931 | utr-variant-3-prime, intron-variant | MDM2, CPM | GRCh38.p7 | 12:68844295 | TGTGTTTCCCTTTTT[C/T]TGGAATGGCCATGCC | 4193 |
rs1057997 | snp | A/C | 0 | 0 | utr-variant-3-prime, intron-variant | MDM2, CPM | GRCh38.p7 | 12:68845398 | TATAAAATGAGCTAA[A/C]AAACGAAAGGCAAAA | 4193 |
rs1065280 | snp | G/T | | | utr-variant-3-prime, intron-variant | MDM2, CPM | GRCh38.p7 | 12:68843931 | TGTTTTTTTCCTTTG[G/T]AGGTCCTCAAAGCAT | 4193 |
rs1130177 | snp | A/G | 0 | 0 | utr-variant-3-prime, intron-variant | MDM2, CPM | GRCh38.p7 | 12:68843778 | TGTCCTCCAAGCATT[A/G]TTTGGAGTTGATAAT | 4193 |
rs1135874 | snp | A/C | 0 | 0 | missense, utr-variant-5-prime | MDM2 | GRCh38.p7 | 12:68809226 | AATGTGCAATACCAA[A/C]ATGTCTGTACCTACT | 4193 |
rs1136323 | snp | G/T | | | utr-variant-3-prime | MDM2 | GRCh38.p7 | 12:68841348 | gagatcctcctgtct[G/T]ggcctcgcaaagtgc | 4193 |
rs1144944 | snp | A/G | 0.499663 | 0.0129749 | upstream-variant-2KB | MDM2, LOC100130075 | GRCh38.p7 | 12:68806705 | CTAACCTCGTGATCC[A/G]CCCACCTCAGCCTCC | 4193 |
rs1144945 | snp | A/T | 0.0256215 | 0.110247 | upstream-variant-2KB | MDM2 | GRCh38.p7 | 12:68807818 | TATTAAACAGCTGTT[A/T]ATTTTGGTTTCTTTT | 4193 |
rs1144946 | snp | A/G | 0.0103295 | 0.0711199 | intron-variant | MDM2 | GRCh38.p7 | 12:68822885 | gacgtggtggcaggc[A/G]cctgtaatcccacct | 4193 |
rs1152925 | snp | C/T | 0.496528 | 0.0415217 | intron-variant | MDM2 | GRCh38.p7 | 12:68825005 | tggtcaggctggtct[C/T]gaactcctgacctcg | 4193 |
rs1196333 | snp | A/T | 0.0825414 | 0.185628 | upstream-variant-2KB, intron-variant | MDM2 | GRCh38.p7 | 12:68808835 | CACACTAGTGACCCG[A/T]CAGGCACCTGCGATC | 4193 |
rs1196334 | snp | A/G | 0.267734 | 0.24937 | intron-variant | MDM2 | GRCh38.p7 | 12:68809624 | CTAAAAGTCAAAAAA[A/G]TTATTCGTGCTTGTT | 4193 |
rs1196335 | snp | A/T | 0.399253 | 0.200558 | intron-variant | MDM2 | GRCh38.p7 | 12:68809744 | GCGTACCCACATATA[A/T]TTACATTTGAATTTA | 4193 |
rs1196336 | snp | A/T | 0.452227 | 0.146984 | intron-variant | MDM2 | GRCh38.p7 | 12:68810471 | attattattattatt[A/T]ttttttttgaggcgg | 4193 |
rs1196337 | snp | A/G | 0.499642 | 0.0133738 | intron-variant | MDM2 | GRCh38.p7 | 12:68811880 | gctgggattaaaggc[A/G]tgagccactgcgcct | 4193 |
rs1196338 | snp | C/T | 0.0252325 | 0.109451 | intron-variant | MDM2 | GRCh38.p7 | 12:68811971 | ggctggtctcacact[C/T]ctgacctcaggtgat | 4193 |
rs1201644 | snp | C/T | 0.499 | 0.0223418 | intron-variant | MDM2 | GRCh38.p7 | 12:68820911 | acacttaTTGACTTA[C/T]CCATGTATATATACA | 4193 |
rs1206251 | snp | A/T | 0.369958 | 0.21934 | intron-variant | MDM2 | GRCh38.p7 | 12:68821745 | CTGAGAGGTGTTttt[A/T]tgttttgttttgttt | 4193 |
rs1211616 | snp | A/G | 0.226042 | 0.253859 | intron-variant | MDM2 | GRCh38.p7 | 12:68821114 | gttgcagtgagtcga[A/G]atcatgccactacac | 4193 |
rs1470383 | snp | C/T | 0.211516 | 0.24702 | intron-variant, upstream-variant-2KB | MDM2 | GRCh38.p7 | 12:68813382 | AGTTGTGATCACAGA[C/T]AGTATCCAATCCAAA | 4193 |
rs1625525 | snp | A/G | 0.39709 | 0.20215 | intron-variant | MDM2 | GRCh38.p7 | 12:68819051 | ATACTTCCAAACATT[A/G]TCCGAAGATTCAATA | 4193 |
rs1630595 | snp | C/T | 0 | 0 | intron-variant | MDM2 | GRCh38.p7 | 12:68825042 | ttgtattttttttag[C/T]agagatggggtttca | 4193 |
rs1663576 | snp | C/G | 0.0248432 | 0.108648 | intron-variant | MDM2 | GRCh38.p7 | 12:68816681 | ACTATGTAGAACAAC[C/G]ATTTTGTACTTAGAA | 4193 |
rs1663577 | snp | C/T | 0.399073 | 0.200692 | intron-variant, upstream-variant-2KB | MDM2 | GRCh38.p7 | 12:68812699 | CACTTTGGGAGACAG[C/T]GCTAGAGGTTTGCTT | 4193 |
rs1663582 | snp | G/T | 0.499137 | 0.0207489 | intron-variant | MDM2 | GRCh38.p7 | 12:68828577 | GTTTATTTATTTATT[G/T]TCTGAGAAAGGGTCT | 4193 |
rs1663583 | snp | A/G | 0.0252325 | 0.109451 | intron-variant | MDM2 | GRCh38.p7 | 12:68828560 | Ctgagaaagggtctt[A/G]ctctgtcacccaggc | 4193 |
rs1663587 | snp | A/G | 0.0142736 | 0.0832652 | utr-variant-3-prime, intron-variant | MDM2, CPM | GRCh38.p7 | 12:68845276 | TATAATTGAAAGCTG[A/G]CTACATGGTAGACAA | 4193 |
rs1690916 | snp | A/G | 0.40733 | 0.194287 | utr-variant-3-prime | MDM2 | GRCh38.p7 | 12:68841626 | GAAAAACAACTCTAA[A/G]ACACTTTAAAGTACC | 4193 |
rs1690920 | snp | A/C | 0.499104 | 0.0211472 | intron-variant | MDM2 | GRCh38.p7 | 12:68830617 | AAATAGGCTCTTGAG[A/C]GGAAATATATGTGAT | 4193 |
rs1690921 | snp | A/G | 0.0252325 | 0.109451 | intron-variant | MDM2 | GRCh38.p7 | 12:68834450 | cttgtctcaaaaaaa[A/G]aaaGggccgggcatg | 4193 |
rs1690922 | snp | G/T | 0.370568 | 0.219005 | intron-variant | MDM2 | GRCh38.p7 | 12:68834708 | GGCCACTGCACTCCA[G/T]CCTGGGTGATGGAGC | 4193 |
rs1690924 | snp | A/G | 0.452597 | 0.146474 | intron-variant | MDM2 | GRCh38.p7 | 12:68811541 | TATTAATGAGAAAAC[A/G]GCTATAAAAGATAAT | 4193 |
rs1695142 | snp | C/T | 0.0252325 | 0.109451 | intron-variant | MDM2 | GRCh38.p7 | 12:68829885 | TTTCTTAAGAGATGT[C/T]ACTGAAAGAAGTTTG | 4193 |
rs1695143 | snp | C/G | 0.210605 | 0.246877 | intron-variant | MDM2 | GRCh38.p7 | 12:68829986 | CTTGTCCAACCCATG[C/G]CCTGTGGGCCATATG | 4193 |
rs1695144 | snp | A/G | 0.0252325 | 0.109451 | intron-variant | MDM2 | GRCh38.p7 | 12:68830162 | cacggaaaccaaagg[A/G]ttggatacATTTTTT | 4193 |
rs1695146 | snp | A/G | 0.409041 | 0.192888 | intron-variant | MDM2 | GRCh38.p7 | 12:68834263 | CCCAGCCAACATGAC[A/G]AAACCCCGTCTCCAC | 4193 |
rs1695147 | snp | G/T | 0.379746 | 0.213696 | intron-variant | MDM2 | GRCh38.p7 | 12:68836409 | AATATCTCCATATTA[G/T]TTATTTATGAAGTAA | 4193 |
rs1695148 | snp | A/G | 0.0252325 | 0.109451 | utr-variant-3-prime | MDM2 | GRCh38.p7 | 12:68841283 | TGATTTAACAAtaga[A/G]acagggtctccctgt | 4193 |
rs1695155 | snp | A/T | | | intron-variant | MDM2 | GRCh38.p7 | 12:68824980 | ttgggaggccgaggc[A/T]ggcggatcacgaggt | 4193 |
rs1695160 | snp | A/C | 0.211819 | 0.247067 | intron-variant | MDM2 | GRCh38.p7 | 12:68826644 | ACAGAGTGAGACTCC[A/C]TCTTAAAAAAAAAAA | 4193 |
rs1695161 | snp | C/T | 0.211819 | 0.247067 | intron-variant | MDM2 | GRCh38.p7 | 12:68826648 | AGTGAGACTCCCTCT[C/T]AAAAAAAAAAAAAAA | 4193 |
rs1795472 | snp | C/G | 0.370162 | 0.219229 | intron-variant | MDM2 | GRCh38.p7 | 12:68817559 | TTTCTCCATGTTGGT[C/G]AGGCTGGTCTCCAAC | 4193 |
rs1795473 | snp | A/C | 0 | 0 | utr-variant-3-prime, intron-variant | MDM2, CPM | GRCh38.p7 | 12:68842771 | TTGAGCTATTTTCAT[A/C]CAAACTGTTGGTTCC | 4193 |
rs1795480 | snp | A/G | 0.0302397 | 0.119186 | synonymous-codon, intron-variant | MDM2 | GRCh38.p7 | 12:68828854 | TTACACACAGAGCCA[A/G]GCTTTCATCAAAGGA | 4193 |
rs1795481 | snp | C/G | 0.410061 | 0.192043 | intron-variant | MDM2 | GRCh38.p7 | 12:68828684 | TTGTACAGAAACTTA[C/G]TTTCAATAAAATTAG | 4193 |
rs1795484 | snp | G/T | | | intron-variant | MDM2 | GRCh38.p7 | 12:68825055 | gcccagctacttttt[G/T]tgtttgtttttgcag | 4193 |
rs1795485 | snp | A/G/T | 0.000399281 | 0.0141238 | intron-variant | MDM2 | GRCh38.p7 | 12:68824983 | ctgacctcgtgatcc[A/G/T]cctgcctcggcctcc | 4193 |
rs1846401 | snp | A/G | 0.185155 | 0.241444 | intron-variant | MDM2 | GRCh38.p7 | 12:68815119 | CTGGCCCTTTCCTAC[A/G]AACACTGTCTTTGGA | 4193 |
rs1846402 | snp | G/T | 0.224412 | 0.248687 | intron-variant | MDM2 | GRCh38.p7 | 12:68814798 | AATTCTGCCTAAGGT[G/T]GCTCAATCTGTCACT | 4193 |
rs2077439 | snp | G/T | 0.174932 | 0.238463 | utr-variant-3-prime | MDM2 | GRCh38.p7 | 12:68841383 | taggattacaggcgt[G/T]agccaccacacccgg | 4193 |
rs2279744 | snp | G/T | 0.464416 | 0.128553 | MDM2 | 12 | allele_origin=G(germline)/T(germline) | 12:68808800 | GGCTGCGGGGCCGCT[G/T]CGGCGCGGGAGGTCC | 4193 |
rs2291857 | snp | A/C | 0.49931 | 0.0185575 | intron-variant | MDM2 | GRCh38.p7 | 12:68824258 | ACCCTTATGCAATTT[A/C]ACCTTTCAATAAACA | 4193 |
rs2440720 | snp | A/G | 0.0252325 | 0.109451 | intron-variant | MDM2 | GRCh38.p7 | 12:68828230 | AACTTTAAAATATAA[A/G]AGCTCATCTGTTTTT | 4193 |
rs2589285 | snp | G/T | 0.472147 | 0.114677 | | | GRCh38.p7 | 12:68831895 | tttagtagagatggg[G/T]tttcacaacatgttg | 4193 |
rs2642564 | snp | G/T | 0 | 0 | downstream-variant-500B, intron-variant | MDM2, CPM | GRCh38.p7 | 12:68845906 | ctggtggcttgcacc[G/T]gtggtccccagctac | 4193 |
rs2642565 | snp | A/G | | | downstream-variant-500B, intron-variant | MDM2, CPM | GRCh38.p7 | 12:68845903 | gtggcttgcacctgt[A/G]gtccccagctacttg | 4193 |
rs2642566 | snp | C/T | | | downstream-variant-500B, intron-variant | MDM2, CPM | GRCh38.p7 | 12:68845889 | tggtccccagctact[C/T]gggaggctgaggtgg | 4193 |
rs2701092 | snp | A/G | 0.469445 | 0.119766 | intron-variant | MDM2 | GRCh38.p7 | 12:68817676 | CCACAACCTCCACCT[A/G]CCTGGTTCAAGTGAT | 4193 |
rs2701098 | snp | A/G | 0.499587 | 0.0143711 | intron-variant, upstream-variant-2KB | MDM2 | GRCh38.p7 | 12:68814122 | CAGTGGCACGATCTC[A/G]GCTCACTGCAACCTC | 4193 |
rs2701102 | snp | C/T | 0.210301 | 0.246828 | intron-variant | MDM2 | GRCh38.p7 | 12:68831828 | cgcccgcctgggcct[C/T]ccaaagtgctgggat | 4193 |
rs2870820 | snp | C/T | 0.356597 | 0.226135 | upstream-variant-2KB, intron-variant | MDM2 | GRCh38.p7 | 12:68808546 | CTCTGACGGTGTCCC[C/T]TCTATCGCTGGTTCC | 4193 |
rs2870821 | snp | A/G | 0.210301 | 0.246828 | utr-variant-3-prime, intron-variant | MDM2, CPM | GRCh38.p7 | 12:68843608 | TATATACTTAGGTGA[A/G]GACAATAAAATCAAC | 4193 |
rs2904506 | snp | G/T | 0.5 | 0 | upstream-variant-2KB | MDM2, LOC100130075 | GRCh38.p7 | 12:68807033 | TAAAAAAAAAAAAGC[G/T]GCAGAAGGGAAGGAT | 4193 |
rs2934769 | snp | C/G | | | utr-variant-3-prime, intron-variant | MDM2, CPM | GRCh38.p7 | 12:68843304 | CTActctctctctct[C/G]tctctctcAATAAAT | 4193 |
rs3168391 | snp | A/T | 0 | 0 | utr-variant-3-prime, intron-variant | MDM2, CPM | GRCh38.p7 | 12:68843043 | TTTCGAGCCTAGCAA[A/T]GATCTAGAAGCAGAT | 4193 |
rs3206286 | snp | A/G | | | utr-variant-3-prime, intron-variant | MDM2, CPM | GRCh38.p7 | 12:68843218 | GAAGGAATAAGTTCT[A/G]GCTGAGGTGTTGTGT | 4193 |
rs3207628 | snp | A/G | | | utr-variant-3-prime, intron-variant | MDM2, CPM | GRCh38.p7 | 12:68843227 | AGTTCTAGCTGAGGT[A/G]TTGTGTCCTCCAAGC | 4193 |
rs3215091 | in-del | -/TG | 0.461686 | 0.133 | intron-variant | MDM2 | GRCh38.p7 | 12:68824132 | AAGACATTAAAAGAC[-/TG]TTAGATAAATTAGCA | 4193 |
rs3730485 | in-del | -/AAAAAGCTGCAGAAGGGAAGGATATAACTNTATAAAAAAA | 0.416322 | 0.186646 | upstream-variant-2KB | MDM2, LOC100130075 | GRCh38.p7 | 12:68807065 | AACTTTATAAAAAAA[lengthTooLong]GGTCCTTGTTCACAA | 4193 |
rs3730486 | snp | C/T | 0.0154538 | 0.0865337 | upstream-variant-2KB | MDM2, LOC100130075 | GRCh38.p7 | 12:68807462 | gaccgccaccacgcc[C/T]gactaatttttgtag | 4193 |
rs3730487 | snp | A/G | 0.0174175 | 0.0916809 | upstream-variant-2KB | MDM2 | GRCh38.p7 | 12:68807516 | catgttggccaggtt[A/G]gtcttgaactcctga | 4193 |
rs3730488 | snp | A/C | 0.0275645 | 0.114116 | upstream-variant-2KB | MDM2 | GRCh38.p7 | 12:68807716 | GTATAAGCCTGCCTT[A/C]AGTGCTATTTTTAAT | 4193 |
rs3730491 | snp | C/G/T | 0.00954734 | 0.0685228 | upstream-variant-2KB | MDM2 | GRCh38.p7 | 12:68808048 | cggggcgACACCCCC[C/G/T]ACTCCATCATCCCGG | 4193 |
rs3730492 | snp | G/T | 0.0111196 | 0.0737302 | upstream-variant-2KB, utr-variant-5-prime | MDM2 | GRCh38.p7 | 12:68808235 | GCCTGTGTGGCCCTG[G/T]GTGTCGGAAAGATGG | 4193 |
rs3730495 | snp | A/G | 0.356383 | 0.226236 | intron-variant | MDM2 | GRCh38.p7 | 12:68809532 | ACATTGTTAAGCGTG[A/G]TTGAAGTTACGTTTG | 4193 |
rs3730498 | snp | G/T | 0.132751 | 0.2208 | intron-variant | MDM2 | GRCh38.p7 | 12:68809774 | AAATCTATGTTATTG[G/T]CCTGTTTGTTGTACT | 4193 |
rs3730499 | snp | A/G | 0.00279162 | 0.0372561 | intron-variant | MDM2 | GRCh38.p7 | 12:68811057 | tttagtagagatggg[A/G]tttttccatgttggt | 4193 |
rs3730500 | snp | C/T | 0.0146672 | 0.084371 | intron-variant | MDM2 | GRCh38.p7 | 12:68811091 | GCTGGTCTTGAACTC[C/T]CAACTTCAGGTGATC | 4193 |
rs3730501 | snp | A/G | 0.00673393 | 0.0576335 | intron-variant | MDM2 | GRCh38.p7 | 12:68811219 | TAGTCTTATCTGTCC[A/G]TTTTCCTTTTAGTTT | 4193 |
rs3730502 | snp | C/G | 0.0329836 | 0.124112 | intron-variant | MDM2 | GRCh38.p7 | 12:68811266 | GTAATTGGAGTAGCT[C/G]TATGTGTTTCAAGTA | 4193 |
rs3730503 | snp | C/T | 0.0142736 | 0.0832652 | intron-variant | MDM2 | GRCh38.p7 | 12:68811422 | CCTGTCCCAAGATCT[C/T]GCAAATATATTCCTA | 4193 |
rs3730504 | snp | A/G | 0.133777 | 0.221342 | intron-variant | MDM2 | GRCh38.p7 | 12:68811507 | CCTTCTTGTTCTTCA[A/G]TGTAAGATTACAAAT | 4193 |
rs3730507 | snp | C/T | 0.132751 | 0.2208 | intron-variant | MDM2 | GRCh38.p7 | 12:68811895 | atgagccactgcgcc[C/T]ggcccacacctgggt | 4193 |
rs3730508 | snp | A/G | 0.132066 | 0.220435 | intron-variant | MDM2 | GRCh38.p7 | 12:68811943 | tagagacggagtttc[A/G]ctgtgttggccaggc | 4193 |
rs3730510 | snp | A/G | 0.0111196 | 0.0737302 | intron-variant | MDM2 | GRCh38.p7 | 12:68812173 | TTCTTTAGCCTGAAA[A/G]TAAAGTGCATATGTA | 4193 |
rs3730511 | snp | A/T | 0.132409 | 0.220618 | intron-variant, upstream-variant-2KB | MDM2 | GRCh38.p7 | 12:68812730 | ctggggttataggca[A/T]gagccacctctccca | 4193 |
rs3730512 | snp | C/T | 0.132751 | 0.2208 | intron-variant, upstream-variant-2KB | MDM2 | GRCh38.p7 | 12:68812738 | ataggcaagagccac[C/T]tctcccagccAGCTG | 4193 |
rs3730514 | snp | C/T | 0.0162398 | 0.0886349 | intron-variant, upstream-variant-2KB | MDM2 | GRCh38.p7 | 12:68814075 | ttttgttttttgaga[C/T]gaagtctcgctctgt | 4193 |
rs3730516 | snp | A/G | 0.0452528 | 0.143452 | intron-variant, upstream-variant-2KB | MDM2 | GRCh38.p7 | 12:68814238 | tttgtctttttagta[A/G]agatggggtttctcc | 4193 |
rs3730517 | snp | A/G | 0.0023933 | 0.0345097 | intron-variant, upstream-variant-2KB | MDM2 | GRCh38.p7 | 12:68814507 | ctacatttataatcg[A/G]aggaaaagctaaatt | 4193 |
rs3730518 | snp | A/G | 0.0158469 | 0.0875917 | intron-variant | MDM2 | GRCh38.p7 | 12:68815107 | TAGCCAGTTAAATCC[A/G]AAGACAGTGTTTGTA | 4193 |
rs3730520 | snp | A/G | 0.0681886 | 0.171594 | intron-variant | MDM2 | GRCh38.p7 | 12:68815231 | TTTAGCAGTAGATAG[A/G]AATGAGAAAATTGGC | 4193 |